RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 NISCHQ9Y2I1 1504 aa31.56■■■□□ 2.64
SEC61A1-206ENST00000491668 CCDC180Q9P1Z9 1646 aa28.16■■■□□ 2.1
SEC61A1-206ENST00000491668 ABCC9O60706 1549 aa27.93■■■□□ 2.06
SEC61A1-206ENST00000491668 RB1CC1Q8TDY2 1594 aa26.66■■□□□ 1.86
SEC61A1-206ENST00000491668 NACADO15069 1562 aa26.56■■□□□ 1.84
SEC61A1-206ENST00000491668 DCAF8L2P0C7V8 631 aa26.45■■□□□ 1.82
SEC61A1-206ENST00000491668 MYO15BQ96JP2 1530 aa26.3■■□□□ 1.8
SEC61A1-206ENST00000491668 ZCCHC6Q5VYS8 1495 aaKnown RBP26.23■■□□□ 1.79
SEC61A1-206ENST00000491668 UNC13AQ9UPW8 1703 aa26.13■■□□□ 1.77
SEC61A1-206ENST00000491668 DCAF1Q9Y4B6 1507 aa26.08■■□□□ 1.77
SEC61A1-206ENST00000491668 PABPN1Q86U42 306 aaKnown RBP eCLIP26.06■■□□□ 1.76
SEC61A1-206ENST00000491668 DNAJC5BQ9UF47 199 aa26.05■■□□□ 1.76
SEC61A1-206ENST00000491668 BICRAQ9NZM4 1560 aa25.98■■□□□ 1.75
SEC61A1-206ENST00000491668 SCRIBQ14160 1630 aa25.7■■□□□ 1.71
SEC61A1-206ENST00000491668 SHROOM4Q9ULL8 1493 aa25.54■■□□□ 1.68
SEC61A1-206ENST00000491668 EIF4G1Q04637 1599 aaKnown RBP25.27■■□□□ 1.64
SEC61A1-206ENST00000491668 CC2D2AQ9P2K1 1620 aa25.25■■□□□ 1.63
SEC61A1-206ENST00000491668 CECR2Q9BXF3 1484 aa25.11■■□□□ 1.61
SEC61A1-206ENST00000491668 NCAPD3P42695 1498 aa24.56■■□□□ 1.52
SEC61A1-206ENST00000491668 SMARCA4P51532 1647 aa24.55■■□□□ 1.52
SEC61A1-206ENST00000491668 ATAD2BQ9ULI0 1458 aa24.52■■□□□ 1.52
SEC61A1-206ENST00000491668 BAZ1AQ9NRL2 1556 aaPredicted RBP24.44■■□□□ 1.5
SEC61A1-206ENST00000491668 SMARCA2P51531 1590 aa24.42■■□□□ 1.5
SEC61A1-206ENST00000491668 HMGXB3Q12766 1538 aa24.37■■□□□ 1.49
SEC61A1-206ENST00000491668 MROH2BQ7Z745 1585 aa24.35■■□□□ 1.49
SEC61A1-206ENST00000491668 PEG3Q9GZU2 1588 aa24.33■■□□□ 1.49
SEC61A1-206ENST00000491668 BAZ1BQ9UIG0 1483 aaKnown RBP24.26■■□□□ 1.47
SEC61A1-206ENST00000491668 NESP48681 1621 aa24.11■■□□□ 1.45
SEC61A1-206ENST00000491668 WIZO95785 1651 aa24.05■■□□□ 1.44
SEC61A1-206ENST00000491668 ERCC6Q03468 1493 aa24.02■■□□□ 1.44
SEC61A1-206ENST00000491668 RSF1Q96T23 1441 aaPredicted RBP23.94■■□□□ 1.42
SEC61A1-206ENST00000491668 CUX2O14529 1486 aa23.92■■□□□ 1.42
SEC61A1-206ENST00000491668 LAMC3Q9Y6N6 1575 aa23.91■■□□□ 1.42
SEC61A1-206ENST00000491668 CADPSQ9ULU8 1353 aa23.8■■□□□ 1.4
SEC61A1-206ENST00000491668 THOC2Q8NI27 1593 aaKnown RBP23.79■■□□□ 1.4
SEC61A1-206ENST00000491668 KIF21AQ7Z4S6 1674 aa23.77■■□□□ 1.4
SEC61A1-206ENST00000491668 PDS5BQ9NTI5 1447 aa23.75■■□□□ 1.39
SEC61A1-206ENST00000491668 TOP2AP11388 1531 aaKnown RBP23.74■■□□□ 1.39
SEC61A1-206ENST00000491668 DNAJC5Q9H3Z4 198 aa23.64■■□□□ 1.37
SEC61A1-206ENST00000491668 CFTRP13569 1480 aa23.61■■□□□ 1.37
SEC61A1-206ENST00000491668 MRC2Q9UBG0 1479 aa23.56■■□□□ 1.36
SEC61A1-206ENST00000491668 FANCD2Q9BXW9 1451 aa23.53■■□□□ 1.36
SEC61A1-206ENST00000491668 WDR62O43379 1518 aa23.52■■□□□ 1.36
SEC61A1-206ENST00000491668 CCDC88BA6NC98 1476 aa23.5■■□□□ 1.35
SEC61A1-206ENST00000491668 CEP164Q9UPV0 1460 aa23.5■■□□□ 1.35
SEC61A1-206ENST00000491668 URB2Q14146 1524 aaKnown RBP23.36■■□□□ 1.33
SEC61A1-206ENST00000491668 PRDM2Q13029 1718 aa23.34■■□□□ 1.33
SEC61A1-206ENST00000491668 TOPBP1Q92547 1522 aa23.13■■□□□ 1.29
SEC61A1-206ENST00000491668 DNMBPQ6XZF7 1577 aa23.05■■□□□ 1.28
SEC61A1-206ENST00000491668 ZNF608Q9ULD9 1512 aaPredicted RBP23.03■■□□□ 1.28
SEC61A1-206ENST00000491668 ABCC8Q09428 1581 aa23.03■■□□□ 1.28
SEC61A1-206ENST00000491668 IFT140Q96RY7 1462 aa23.03■■□□□ 1.28
SEC61A1-206ENST00000491668 SUPT5HO00267 1087 aaKnown RBP23.02■■□□□ 1.28
SEC61A1-206ENST00000491668 TARBP1Q13395 1621 aaKnown RBP22.93■■□□□ 1.26
SEC61A1-206ENST00000491668 POLA1P09884 1462 aaPredicted RBP22.92■■□□□ 1.26
SEC61A1-206ENST00000491668 EIF4G3O43432 1585 aaKnown RBP22.88■■□□□ 1.25
SEC61A1-206ENST00000491668 OSCARQ8IYS5 282 aa22.86■■□□□ 1.25
SEC61A1-206ENST00000491668 CUX1P39880 1505 aa22.86■■□□□ 1.25
SEC61A1-206ENST00000491668 RAD54L2Q9Y4B4 1467 aa22.85■■□□□ 1.25
SEC61A1-206ENST00000491668 AQRO60306 1485 aaKnown RBP eCLIP22.84■■□□□ 1.252e-6■■■■□ 24.7
SEC61A1-206ENST00000491668 FGD5Q6ZNL6 1462 aa22.8■■□□□ 1.24
SEC61A1-206ENST00000491668 SOGA1O94964 1423 aa22.79■■□□□ 1.24
SEC61A1-206ENST00000491668 TDRD9Q8NDG6 1382 aaKnown RBP22.74■■□□□ 1.23
SEC61A1-206ENST00000491668 TRIM41Q8WV44 630 aa22.67■■□□□ 1.22
SEC61A1-206ENST00000491668 CHD1O14646 1710 aa22.65■■□□□ 1.22
SEC61A1-206ENST00000491668 WDR97A6NE52 1622 aa22.64■■□□□ 1.21
SEC61A1-206ENST00000491668 SNAPC4Q5SXM2 1469 aa22.59■■□□□ 1.21
SEC61A1-206ENST00000491668 RIMBP3CA6NJZ7 1639 aa22.57■■□□□ 1.2
SEC61A1-206ENST00000491668 RIMBP3BA6NNM3 1639 aa22.57■■□□□ 1.2
SEC61A1-206ENST00000491668 RIMBP3Q9UFD9 1639 aa22.57■■□□□ 1.2
SEC61A1-206ENST00000491668 ABCA10Q8WWZ4 1543 aa22.56■■□□□ 1.2
SEC61A1-206ENST00000491668 GRIN2BQ13224 1484 aa22.55■■□□□ 1.2
SEC61A1-206ENST00000491668 FBLN2P98095 1184 aa22.55■■□□□ 1.2
SEC61A1-206ENST00000491668 SYNJ1O43426 1573 aa22.55■■□□□ 1.2
SEC61A1-206ENST00000491668 ARHGEF11O15085 1522 aa22.53■■□□□ 1.2
SEC61A1-206ENST00000491668 WRNQ14191 1432 aaPredicted RBP eCLIP22.53■■□□□ 1.2
SEC61A1-206ENST00000491668 TOP2BQ02880 1626 aa22.53■■□□□ 1.2
SEC61A1-206ENST00000491668 BIVM-ERCC5R4GMW8 1640 aa22.53■■□□□ 1.2
SEC61A1-206ENST00000491668 GAPVD1Q14C86 1478 aa22.52■■□□□ 1.2
SEC61A1-206ENST00000491668 MAGI1Q96QZ7 1491 aaPredicted RBP22.52■■□□□ 1.2
SEC61A1-206ENST00000491668 ABCA5Q8WWZ7 1642 aa22.51■■□□□ 1.19
SEC61A1-206ENST00000491668 PBRM1Q86U86 1689 aa22.49■■□□□ 1.19
SEC61A1-206ENST00000491668 SYNJ2O15056 1496 aa22.45■■□□□ 1.18
SEC61A1-206ENST00000491668 CLASP1Q7Z460 1538 aa22.43■■□□□ 1.18
SEC61A1-206ENST00000491668 CHMP7Q8WUX9 453 aaPredicted RBP22.43■■□□□ 1.18
SEC61A1-206ENST00000491668 ARAP1Q96P48 1450 aa22.35■■□□□ 1.17
SEC61A1-206ENST00000491668 CYB5RLQ6IPT4 315 aa22.33■■□□□ 1.17
SEC61A1-206ENST00000491668 ADAMTS12P58397 1594 aa22.31■■□□□ 1.16
SEC61A1-206ENST00000491668 GRIN2AQ12879 1464 aa22.28■■□□□ 1.16
SEC61A1-206ENST00000491668 ERICH3Q5RHP9 1530 aa22.26■■□□□ 1.15
SEC61A1-206ENST00000491668 FHAD1B1AJZ9 1412 aa22.23■■□□□ 1.15
SEC61A1-206ENST00000491668 NUP160Q12769 1436 aa22.22■■□□□ 1.15
SEC61A1-206ENST00000491668 CEP170Q5SW79 1584 aa22.21■■□□□ 1.15
SEC61A1-206ENST00000491668 ERCC6L2Q5T890 1561 aa22.14■■□□□ 1.13
SEC61A1-206ENST00000491668 IGF1RP08069 1367 aa22.09■■□□□ 1.13
SEC61A1-206ENST00000491668 SHROOM2Q13796 1616 aa22.09■■□□□ 1.13
SEC61A1-206ENST00000491668 KIF27Q86VH2 1401 aa22.06■■□□□ 1.12
SEC61A1-206ENST00000491668 RUSC2Q8N2Y8 1516 aa21.99■■□□□ 1.11
SEC61A1-206ENST00000491668 CUL7Q14999 1698 aa21.96■■□□□ 1.11
SEC61A1-206ENST00000491668 JPH4Q96JJ6 628 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms