RNA–Protein interactions for RNA: ENST00000491651.1

SMARCD3-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 4

Gene SMARCD3, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-214ENST00000491651 NISCHQ9Y2I1 1504 aa43.07■■■■■ 4.48
SMARCD3-214ENST00000491651 CCDC180Q9P1Z9 1646 aa38.56■■■■□ 3.76
SMARCD3-214ENST00000491651 ABCC9O60706 1549 aa37.77■■■■□ 3.64
SMARCD3-214ENST00000491651 RB1CC1Q8TDY2 1594 aa36.35■■■■□ 3.41
SMARCD3-214ENST00000491651 NACADO15069 1562 aa36.23■■■■□ 3.39
SMARCD3-214ENST00000491651 DCAF8L2P0C7V8 631 aa35.93■■■■□ 3.34
SMARCD3-214ENST00000491651 MYO15BQ96JP2 1530 aa35.93■■■■□ 3.34
SMARCD3-214ENST00000491651 ZCCHC6Q5VYS8 1495 aaKnown RBP35.85■■■■□ 3.33
SMARCD3-214ENST00000491651 DCAF1Q9Y4B6 1507 aa35.67■■■■□ 3.3
SMARCD3-214ENST00000491651 UNC13AQ9UPW8 1703 aa35.62■■■■□ 3.29
SMARCD3-214ENST00000491651 BICRAQ9NZM4 1560 aa35.2■■■■□ 3.23
SMARCD3-214ENST00000491651 PABPN1Q86U42 306 aaKnown RBP eCLIP35.15■■■■□ 3.22
SMARCD3-214ENST00000491651 SCRIBQ14160 1630 aa35.05■■■■□ 3.2
SMARCD3-214ENST00000491651 DNAJC5BQ9UF47 199 aa34.91■■■■□ 3.18
SMARCD3-214ENST00000491651 SHROOM4Q9ULL8 1493 aa34.9■■■■□ 3.18
SMARCD3-214ENST00000491651 EIF4G1Q04637 1599 aaKnown RBP34.31■■■■□ 3.08
SMARCD3-214ENST00000491651 CC2D2AQ9P2K1 1620 aa34.23■■■■□ 3.07
SMARCD3-214ENST00000491651 CECR2Q9BXF3 1484 aa33.99■■■■□ 3.03
SMARCD3-214ENST00000491651 SMARCA4P51532 1647 aa33.53■■■□□ 2.96
SMARCD3-214ENST00000491651 BAZ1AQ9NRL2 1556 aaPredicted RBP33.45■■■□□ 2.95
SMARCD3-214ENST00000491651 SMARCA2P51531 1590 aa33.36■■■□□ 2.93
SMARCD3-214ENST00000491651 NCAPD3P42695 1498 aa33.35■■■□□ 2.93
SMARCD3-214ENST00000491651 ATAD2BQ9ULI0 1458 aa33.33■■■□□ 2.93
SMARCD3-214ENST00000491651 HMGXB3Q12766 1538 aa33.26■■■□□ 2.91
SMARCD3-214ENST00000491651 PEG3Q9GZU2 1588 aa33.21■■■□□ 2.91
SMARCD3-214ENST00000491651 MROH2BQ7Z745 1585 aa33.16■■■□□ 2.9
SMARCD3-214ENST00000491651 BAZ1BQ9UIG0 1483 aaKnown RBP33.08■■■□□ 2.89
SMARCD3-214ENST00000491651 WIZO95785 1651 aa32.85■■■□□ 2.85
SMARCD3-214ENST00000491651 RSF1Q96T23 1441 aaPredicted RBP32.65■■■□□ 2.82
SMARCD3-214ENST00000491651 ERCC6Q03468 1493 aa32.62■■■□□ 2.81
SMARCD3-214ENST00000491651 LAMC3Q9Y6N6 1575 aa32.61■■■□□ 2.81
SMARCD3-214ENST00000491651 NESP48681 1621 aa32.6■■■□□ 2.81
SMARCD3-214ENST00000491651 TOP2AP11388 1531 aaKnown RBP32.5■■■□□ 2.79
SMARCD3-214ENST00000491651 CUX2O14529 1486 aa32.41■■■□□ 2.78
SMARCD3-214ENST00000491651 KIF21AQ7Z4S6 1674 aa32.37■■■□□ 2.77
SMARCD3-214ENST00000491651 CADPSQ9ULU8 1353 aa32.34■■■□□ 2.77
SMARCD3-214ENST00000491651 PDS5BQ9NTI5 1447 aa32.32■■■□□ 2.76
SMARCD3-214ENST00000491651 THOC2Q8NI27 1593 aaKnown RBP32.28■■■□□ 2.76
SMARCD3-214ENST00000491651 PRDM2Q13029 1718 aa32.12■■■□□ 2.73
SMARCD3-214ENST00000491651 CFTRP13569 1480 aa32.12■■■□□ 2.73
SMARCD3-214ENST00000491651 CCDC88BA6NC98 1476 aa32.03■■■□□ 2.72
SMARCD3-214ENST00000491651 MRC2Q9UBG0 1479 aa32.03■■■□□ 2.72
SMARCD3-214ENST00000491651 CEP164Q9UPV0 1460 aa32.03■■■□□ 2.72
SMARCD3-214ENST00000491651 FANCD2Q9BXW9 1451 aa32.01■■■□□ 2.71
SMARCD3-214ENST00000491651 WDR62O43379 1518 aa31.95■■■□□ 2.71
SMARCD3-214ENST00000491651 URB2Q14146 1524 aaKnown RBP31.7■■■□□ 2.66
SMARCD3-214ENST00000491651 DNAJC5Q9H3Z4 198 aa31.68■■■□□ 2.66
SMARCD3-214ENST00000491651 SUPT5HO00267 1087 aaKnown RBP31.56■■■□□ 2.64
SMARCD3-214ENST00000491651 ABCC8Q09428 1581 aa31.51■■■□□ 2.63
SMARCD3-214ENST00000491651 TOPBP1Q92547 1522 aa31.49■■■□□ 2.63
SMARCD3-214ENST00000491651 DNMBPQ6XZF7 1577 aa31.47■■■□□ 2.63
SMARCD3-214ENST00000491651 IFT140Q96RY7 1462 aa31.35■■■□□ 2.61
SMARCD3-214ENST00000491651 TARBP1Q13395 1621 aaKnown RBP31.2■■■□□ 2.58
SMARCD3-214ENST00000491651 POLA1P09884 1462 aaPredicted RBP31.18■■■□□ 2.58
SMARCD3-214ENST00000491651 ZNF608Q9ULD9 1512 aaPredicted RBP31.17■■■□□ 2.58
SMARCD3-214ENST00000491651 EIF4G3O43432 1585 aaKnown RBP31.16■■■□□ 2.58
SMARCD3-214ENST00000491651 CUX1P39880 1505 aa31.14■■■□□ 2.58
SMARCD3-214ENST00000491651 FGD5Q6ZNL6 1462 aa31.08■■■□□ 2.57
SMARCD3-214ENST00000491651 WDR97A6NE52 1622 aa31.02■■■□□ 2.56
SMARCD3-214ENST00000491651 SOGA1O94964 1423 aa31.01■■■□□ 2.55
SMARCD3-214ENST00000491651 RAD54L2Q9Y4B4 1467 aa31.01■■■□□ 2.55
SMARCD3-214ENST00000491651 AQRO60306 1485 aaKnown RBP eCLIP30.95■■■□□ 2.54
SMARCD3-214ENST00000491651 BIVM-ERCC5R4GMW8 1640 aa30.91■■■□□ 2.54
SMARCD3-214ENST00000491651 OSCARQ8IYS5 282 aa30.9■■■□□ 2.54
SMARCD3-214ENST00000491651 CHD1O14646 1710 aa30.87■■■□□ 2.53
SMARCD3-214ENST00000491651 TOP2BQ02880 1626 aa30.87■■■□□ 2.53
SMARCD3-214ENST00000491651 WRNQ14191 1432 aaPredicted RBP eCLIP30.83■■■□□ 2.53
SMARCD3-214ENST00000491651 TDRD9Q8NDG6 1382 aaKnown RBP30.83■■■□□ 2.53
SMARCD3-214ENST00000491651 SYNJ1O43426 1573 aa30.8■■■□□ 2.52
SMARCD3-214ENST00000491651 PBRM1Q86U86 1689 aa30.8■■■□□ 2.52
SMARCD3-214ENST00000491651 ABCA10Q8WWZ4 1543 aa30.78■■■□□ 2.52
SMARCD3-214ENST00000491651 ABCA5Q8WWZ7 1642 aa30.74■■■□□ 2.51
SMARCD3-214ENST00000491651 GRIN2BQ13224 1484 aa30.73■■■□□ 2.51
SMARCD3-214ENST00000491651 SNAPC4Q5SXM2 1469 aa30.72■■■□□ 2.51
SMARCD3-214ENST00000491651 MAGI1Q96QZ7 1491 aaPredicted RBP30.71■■■□□ 2.51
SMARCD3-214ENST00000491651 GAPVD1Q14C86 1478 aa30.7■■■□□ 2.5
SMARCD3-214ENST00000491651 FBLN2P98095 1184 aa30.6■■■□□ 2.49
SMARCD3-214ENST00000491651 SYNJ2O15056 1496 aa30.57■■■□□ 2.48
SMARCD3-214ENST00000491651 RIMBP3CA6NJZ7 1639 aa30.56■■■□□ 2.48
SMARCD3-214ENST00000491651 RIMBP3BA6NNM3 1639 aa30.56■■■□□ 2.48
SMARCD3-214ENST00000491651 RIMBP3Q9UFD9 1639 aa30.56■■■□□ 2.48
SMARCD3-214ENST00000491651 CHMP7Q8WUX9 453 aaPredicted RBP30.5■■■□□ 2.47
SMARCD3-214ENST00000491651 ARHGEF11O15085 1522 aa30.49■■■□□ 2.47
SMARCD3-214ENST00000491651 ADAMTS12P58397 1594 aa30.47■■■□□ 2.47
SMARCD3-214ENST00000491651 TRIM41Q8WV44 630 aa30.47■■■□□ 2.47
SMARCD3-214ENST00000491651 CLASP1Q7Z460 1538 aa30.45■■■□□ 2.47
SMARCD3-214ENST00000491651 ERICH3Q5RHP9 1530 aa30.44■■■□□ 2.46
SMARCD3-214ENST00000491651 GRIN2AQ12879 1464 aa30.35■■■□□ 2.45
SMARCD3-214ENST00000491651 FHAD1B1AJZ9 1412 aa30.32■■■□□ 2.44
SMARCD3-214ENST00000491651 KIF27Q86VH2 1401 aa30.22■■■□□ 2.43
SMARCD3-214ENST00000491651 CEP170Q5SW79 1584 aa30.22■■■□□ 2.43
SMARCD3-214ENST00000491651 NUP160Q12769 1436 aa30.21■■■□□ 2.43
SMARCD3-214ENST00000491651 ARAP1Q96P48 1450 aa30.2■■■□□ 2.43
SMARCD3-214ENST00000491651 CUL7Q14999 1698 aa30.19■■■□□ 2.42
SMARCD3-214ENST00000491651 CYB5RLQ6IPT4 315 aa30.1■■■□□ 2.41
SMARCD3-214ENST00000491651 SHROOM2Q13796 1616 aa30.09■■■□□ 2.41
SMARCD3-214ENST00000491651 IGF1RP08069 1367 aa30.04■■■□□ 2.4
SMARCD3-214ENST00000491651 RUSC2Q8N2Y8 1516 aa30.02■■■□□ 2.4
SMARCD3-214ENST00000491651 ERCC6L2Q5T890 1561 aa29.94■■■□□ 2.38
SMARCD3-214ENST00000491651 CARMIL1Q5VZK9 1371 aa29.9■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms