RNA–Protein interactions for RNA: ENST00000491645.1

STX1A-211, Transcript of syntaxin 1A, humanhuman

TSL 2

Gene STX1A, Length 650 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STX1A-211ENST00000491645 NISCHQ9Y2I1 1504 aa46.57■■■■■ 5.05
STX1A-211ENST00000491645 CCDC180Q9P1Z9 1646 aa41.58■■■■■ 4.25
STX1A-211ENST00000491645 ABCC9O60706 1549 aa41.18■■■■■ 4.18
STX1A-211ENST00000491645 RB1CC1Q8TDY2 1594 aa39.42■■■■□ 3.9
STX1A-211ENST00000491645 NACADO15069 1562 aa39.27■■■■□ 3.88
STX1A-211ENST00000491645 DCAF8L2P0C7V8 631 aa39.07■■■■□ 3.85
STX1A-211ENST00000491645 MYO15BQ96JP2 1530 aa38.94■■■■□ 3.82
STX1A-211ENST00000491645 ZCCHC6Q5VYS8 1495 aaKnown RBP38.7■■■■□ 3.79
STX1A-211ENST00000491645 DCAF1Q9Y4B6 1507 aa38.56■■■■□ 3.76
STX1A-211ENST00000491645 PABPN1Q86U42 306 aaKnown RBP eCLIP38.4■■■■□ 3.74
STX1A-211ENST00000491645 UNC13AQ9UPW8 1703 aa38.32■■■■□ 3.73
STX1A-211ENST00000491645 DNAJC5BQ9UF47 199 aa38.26■■■■□ 3.72
STX1A-211ENST00000491645 BICRAQ9NZM4 1560 aa38.2■■■■□ 3.71
STX1A-211ENST00000491645 SHROOM4Q9ULL8 1493 aa37.9■■■■□ 3.66
STX1A-211ENST00000491645 SCRIBQ14160 1630 aa37.87■■■■□ 3.65
STX1A-211ENST00000491645 EIF4G1Q04637 1599 aaKnown RBP37.26■■■■□ 3.56
STX1A-211ENST00000491645 CC2D2AQ9P2K1 1620 aa37.21■■■■□ 3.55
STX1A-211ENST00000491645 CECR2Q9BXF3 1484 aa37.1■■■■□ 3.53
STX1A-211ENST00000491645 NCAPD3P42695 1498 aa36.28■■■■□ 3.4
STX1A-211ENST00000491645 SMARCA4P51532 1647 aa36.19■■■■□ 3.38
STX1A-211ENST00000491645 ATAD2BQ9ULI0 1458 aa36.19■■■■□ 3.38
STX1A-211ENST00000491645 BAZ1AQ9NRL2 1556 aaPredicted RBP36.14■■■■□ 3.38
STX1A-211ENST00000491645 SMARCA2P51531 1590 aa36.12■■■■□ 3.37
STX1A-211ENST00000491645 HMGXB3Q12766 1538 aa36.03■■■■□ 3.36
STX1A-211ENST00000491645 PEG3Q9GZU2 1588 aa35.91■■■■□ 3.34
STX1A-211ENST00000491645 BAZ1BQ9UIG0 1483 aaKnown RBP35.86■■■■□ 3.33
STX1A-211ENST00000491645 MROH2BQ7Z745 1585 aa35.85■■■■□ 3.33
STX1A-211ENST00000491645 ERCC6Q03468 1493 aa35.57■■■■□ 3.28
STX1A-211ENST00000491645 NESP48681 1621 aa35.46■■■■□ 3.27
STX1A-211ENST00000491645 CUX2O14529 1486 aa35.42■■■■□ 3.26
STX1A-211ENST00000491645 WIZO95785 1651 aa35.37■■■■□ 3.25
STX1A-211ENST00000491645 LAMC3Q9Y6N6 1575 aa35.35■■■■□ 3.25
STX1A-211ENST00000491645 RSF1Q96T23 1441 aaPredicted RBP35.3■■■■□ 3.24
STX1A-211ENST00000491645 CADPSQ9ULU8 1353 aa35.19■■■■□ 3.22
STX1A-211ENST00000491645 PDS5BQ9NTI5 1447 aa35.18■■■■□ 3.22
STX1A-211ENST00000491645 TOP2AP11388 1531 aaKnown RBP35.06■■■■□ 3.2
STX1A-211ENST00000491645 THOC2Q8NI27 1593 aaKnown RBP35.04■■■■□ 3.2
STX1A-211ENST00000491645 KIF21AQ7Z4S6 1674 aa34.95■■■■□ 3.19
STX1A-211ENST00000491645 DNAJC5Q9H3Z4 198 aa34.92■■■■□ 3.18
STX1A-211ENST00000491645 CFTRP13569 1480 aa34.86■■■■□ 3.17
STX1A-211ENST00000491645 MRC2Q9UBG0 1479 aa34.83■■■■□ 3.17
STX1A-211ENST00000491645 FANCD2Q9BXW9 1451 aa34.76■■■■□ 3.15
STX1A-211ENST00000491645 CEP164Q9UPV0 1460 aa34.76■■■■□ 3.15
STX1A-211ENST00000491645 WDR62O43379 1518 aa34.72■■■■□ 3.15
STX1A-211ENST00000491645 CCDC88BA6NC98 1476 aa34.64■■■■□ 3.14
STX1A-211ENST00000491645 URB2Q14146 1524 aaKnown RBP34.41■■■■□ 3.1
STX1A-211ENST00000491645 PRDM2Q13029 1718 aa34.37■■■■□ 3.09
STX1A-211ENST00000491645 ABCC8Q09428 1581 aa34.15■■■■□ 3.06
STX1A-211ENST00000491645 TOPBP1Q92547 1522 aa34.13■■■■□ 3.05
STX1A-211ENST00000491645 IFT140Q96RY7 1462 aa34.08■■■■□ 3.05
STX1A-211ENST00000491645 DNMBPQ6XZF7 1577 aa34.03■■■■□ 3.04
STX1A-211ENST00000491645 SUPT5HO00267 1087 aaKnown RBP33.96■■■■□ 3.03
STX1A-211ENST00000491645 ZNF608Q9ULD9 1512 aaPredicted RBP33.91■■■■□ 3.02
STX1A-211ENST00000491645 OSCARQ8IYS5 282 aa33.85■■■■□ 3.01
STX1A-211ENST00000491645 POLA1P09884 1462 aaPredicted RBP33.81■■■■□ 3
STX1A-211ENST00000491645 TARBP1Q13395 1621 aaKnown RBP33.76■■■■□ 3
STX1A-211ENST00000491645 EIF4G3O43432 1585 aaKnown RBP33.73■■■□□ 2.99
STX1A-211ENST00000491645 SOGA1O94964 1423 aa33.68■■■□□ 2.98
STX1A-211ENST00000491645 AQRO60306 1485 aaKnown RBP eCLIP33.67■■■□□ 2.98
STX1A-211ENST00000491645 CUX1P39880 1505 aa33.66■■■□□ 2.98
STX1A-211ENST00000491645 FGD5Q6ZNL6 1462 aa33.64■■■□□ 2.98
STX1A-211ENST00000491645 RAD54L2Q9Y4B4 1467 aa33.64■■■□□ 2.98
STX1A-211ENST00000491645 WDR97A6NE52 1622 aa33.53■■■□□ 2.96
STX1A-211ENST00000491645 TDRD9Q8NDG6 1382 aaKnown RBP33.53■■■□□ 2.96
STX1A-211ENST00000491645 TRIM41Q8WV44 630 aa33.49■■■□□ 2.95
STX1A-211ENST00000491645 FBLN2P98095 1184 aa33.36■■■□□ 2.93
STX1A-211ENST00000491645 GRIN2BQ13224 1484 aa33.36■■■□□ 2.93
STX1A-211ENST00000491645 SNAPC4Q5SXM2 1469 aa33.35■■■□□ 2.93
STX1A-211ENST00000491645 ABCA10Q8WWZ4 1543 aa33.33■■■□□ 2.93
STX1A-211ENST00000491645 MAGI1Q96QZ7 1491 aaPredicted RBP33.32■■■□□ 2.92
STX1A-211ENST00000491645 CHD1O14646 1710 aa33.31■■■□□ 2.92
STX1A-211ENST00000491645 WRNQ14191 1432 aaPredicted RBP eCLIP33.3■■■□□ 2.92
STX1A-211ENST00000491645 GAPVD1Q14C86 1478 aa33.27■■■□□ 2.92
STX1A-211ENST00000491645 RIMBP3CA6NJZ7 1639 aa33.27■■■□□ 2.92
STX1A-211ENST00000491645 RIMBP3BA6NNM3 1639 aa33.27■■■□□ 2.92
STX1A-211ENST00000491645 RIMBP3Q9UFD9 1639 aa33.27■■■□□ 2.92
STX1A-211ENST00000491645 ARHGEF11O15085 1522 aa33.27■■■□□ 2.92
STX1A-211ENST00000491645 TOP2BQ02880 1626 aa33.24■■■□□ 2.91
STX1A-211ENST00000491645 CHMP7Q8WUX9 453 aaPredicted RBP33.23■■■□□ 2.91
STX1A-211ENST00000491645 BIVM-ERCC5R4GMW8 1640 aa33.2■■■□□ 2.91
STX1A-211ENST00000491645 SYNJ2O15056 1496 aa33.2■■■□□ 2.91
STX1A-211ENST00000491645 ABCA5Q8WWZ7 1642 aa33.18■■■□□ 2.9
STX1A-211ENST00000491645 SYNJ1O43426 1573 aa33.17■■■□□ 2.9
STX1A-211ENST00000491645 PBRM1Q86U86 1689 aa33.11■■■□□ 2.89
STX1A-211ENST00000491645 CLASP1Q7Z460 1538 aa33.07■■■□□ 2.89
STX1A-211ENST00000491645 CYB5RLQ6IPT4 315 aa32.99■■■□□ 2.87
STX1A-211ENST00000491645 ARAP1Q96P48 1450 aa32.96■■■□□ 2.87
STX1A-211ENST00000491645 GRIN2AQ12879 1464 aa32.92■■■□□ 2.86
STX1A-211ENST00000491645 ADAMTS12P58397 1594 aa32.92■■■□□ 2.86
STX1A-211ENST00000491645 ERICH3Q5RHP9 1530 aa32.91■■■□□ 2.86
STX1A-211ENST00000491645 FHAD1B1AJZ9 1412 aa32.9■■■□□ 2.86
STX1A-211ENST00000491645 NUP160Q12769 1436 aa32.81■■■□□ 2.84
STX1A-211ENST00000491645 CEP170Q5SW79 1584 aa32.72■■■□□ 2.83
STX1A-211ENST00000491645 KIF27Q86VH2 1401 aa32.67■■■□□ 2.82
STX1A-211ENST00000491645 IGF1RP08069 1367 aa32.58■■■□□ 2.81
STX1A-211ENST00000491645 SHROOM2Q13796 1616 aa32.56■■■□□ 2.8
STX1A-211ENST00000491645 ERCC6L2Q5T890 1561 aa32.52■■■□□ 2.8
STX1A-211ENST00000491645 TRHP20396 242 aaPredicted RBP32.49■■■□□ 2.79
STX1A-211ENST00000491645 CUL7Q14999 1698 aa32.46■■■□□ 2.79
STX1A-211ENST00000491645 JPH4Q96JJ6 628 aa32.45■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms