RNA–Protein interactions for RNA: ENST00000491574.2

SMARCA2-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-217ENST00000491574 NISCHQ9Y2I1 1504 aa25.35■■□□□ 1.65
SMARCA2-217ENST00000491574 ABCC9O60706 1549 aa23.39■■□□□ 1.34
SMARCA2-217ENST00000491574 CCDC180Q9P1Z9 1646 aa22.79■■□□□ 1.24
SMARCA2-217ENST00000491574 DNAJC5BQ9UF47 199 aa22.4■■□□□ 1.18
SMARCA2-217ENST00000491574 RB1CC1Q8TDY2 1594 aa21.95■■□□□ 1.11
SMARCA2-217ENST00000491574 PABPN1Q86U42 306 aaKnown RBP eCLIP21.82■■□□□ 1.08
SMARCA2-217ENST00000491574 DCAF8L2P0C7V8 631 aa21.79■■□□□ 1.08
SMARCA2-217ENST00000491574 NACADO15069 1562 aa21.7■■□□□ 1.06
SMARCA2-217ENST00000491574 UNC13AQ9UPW8 1703 aa21.45■■□□□ 1.02
SMARCA2-217ENST00000491574 BICRAQ9NZM4 1560 aa21.39■■□□□ 1.01
SMARCA2-217ENST00000491574 MYO15BQ96JP2 1530 aa21.21■□□□□ 0.99
SMARCA2-217ENST00000491574 CECR2Q9BXF3 1484 aa21.07■□□□□ 0.96
SMARCA2-217ENST00000491574 CC2D2AQ9P2K1 1620 aa21.04■□□□□ 0.96
SMARCA2-217ENST00000491574 SCRIBQ14160 1630 aa20.9■□□□□ 0.94
SMARCA2-217ENST00000491574 ZCCHC6Q5VYS8 1495 aaKnown RBP20.89■□□□□ 0.94
SMARCA2-217ENST00000491574 SHROOM4Q9ULL8 1493 aa20.89■□□□□ 0.94
SMARCA2-217ENST00000491574 EIF4G1Q04637 1599 aaKnown RBP20.88■□□□□ 0.93
SMARCA2-217ENST00000491574 DCAF1Q9Y4B6 1507 aa20.82■□□□□ 0.92
SMARCA2-217ENST00000491574 DNAJC5Q9H3Z4 198 aa20.76■□□□□ 0.91
SMARCA2-217ENST00000491574 CUX2O14529 1486 aa20.19■□□□□ 0.82
SMARCA2-217ENST00000491574 ERCC6Q03468 1493 aa20.18■□□□□ 0.82
SMARCA2-217ENST00000491574 NCAPD3P42695 1498 aa20.09■□□□□ 0.81
SMARCA2-217ENST00000491574 ATAD2BQ9ULI0 1458 aa20■□□□□ 0.79
SMARCA2-217ENST00000491574 NESP48681 1621 aa20■□□□□ 0.79
SMARCA2-217ENST00000491574 SMARCA2P51531 1590 aa19.84■□□□□ 0.77
SMARCA2-217ENST00000491574 SMARCA4P51532 1647 aa19.84■□□□□ 0.77
SMARCA2-217ENST00000491574 HMGXB3Q12766 1538 aa19.83■□□□□ 0.77
SMARCA2-217ENST00000491574 TRIM41Q8WV44 630 aa19.78■□□□□ 0.76
SMARCA2-217ENST00000491574 BAZ1BQ9UIG0 1483 aaKnown RBP19.77■□□□□ 0.76
SMARCA2-217ENST00000491574 THOC2Q8NI27 1593 aaKnown RBP19.74■□□□□ 0.75
SMARCA2-217ENST00000491574 BAZ1AQ9NRL2 1556 aaPredicted RBP19.66■□□□□ 0.74
SMARCA2-217ENST00000491574 LAMC3Q9Y6N6 1575 aa19.64■□□□□ 0.73
SMARCA2-217ENST00000491574 KIF21AQ7Z4S6 1674 aa19.62■□□□□ 0.73
SMARCA2-217ENST00000491574 PDS5BQ9NTI5 1447 aa19.59■□□□□ 0.73
SMARCA2-217ENST00000491574 PEG3Q9GZU2 1588 aa19.59■□□□□ 0.73
SMARCA2-217ENST00000491574 MROH2BQ7Z745 1585 aa19.58■□□□□ 0.73
SMARCA2-217ENST00000491574 CADPSQ9ULU8 1353 aa19.5■□□□□ 0.71
SMARCA2-217ENST00000491574 MRC2Q9UBG0 1479 aa19.46■□□□□ 0.71
SMARCA2-217ENST00000491574 WDR62O43379 1518 aa19.39■□□□□ 0.69
SMARCA2-217ENST00000491574 OSCARQ8IYS5 282 aa19.33■□□□□ 0.68
SMARCA2-217ENST00000491574 WIZO95785 1651 aa19.31■□□□□ 0.68
SMARCA2-217ENST00000491574 CEP164Q9UPV0 1460 aa19.29■□□□□ 0.68
SMARCA2-217ENST00000491574 FANCD2Q9BXW9 1451 aa19.28■□□□□ 0.68
SMARCA2-217ENST00000491574 CFTRP13569 1480 aa19.16■□□□□ 0.66
SMARCA2-217ENST00000491574 URB2Q14146 1524 aaKnown RBP19.15■□□□□ 0.66
SMARCA2-217ENST00000491574 RIMBP3CA6NJZ7 1639 aa19.05■□□□□ 0.64
SMARCA2-217ENST00000491574 RIMBP3BA6NNM3 1639 aa19.05■□□□□ 0.64
SMARCA2-217ENST00000491574 RIMBP3Q9UFD9 1639 aa19.05■□□□□ 0.64
SMARCA2-217ENST00000491574 RSF1Q96T23 1441 aaPredicted RBP19.04■□□□□ 0.64
SMARCA2-217ENST00000491574 ZNF608Q9ULD9 1512 aaPredicted RBP19.02■□□□□ 0.64
SMARCA2-217ENST00000491574 TOP2AP11388 1531 aaKnown RBP18.98■□□□□ 0.63
SMARCA2-217ENST00000491574 CYB5RLQ6IPT4 315 aa18.97■□□□□ 0.63
SMARCA2-217ENST00000491574 ARHGEF11O15085 1522 aa18.96■□□□□ 0.63
SMARCA2-217ENST00000491574 IFT140Q96RY7 1462 aa18.92■□□□□ 0.62
SMARCA2-217ENST00000491574 TRHP20396 242 aaPredicted RBP18.89■□□□□ 0.61
SMARCA2-217ENST00000491574 TOPBP1Q92547 1522 aa18.85■□□□□ 0.61
SMARCA2-217ENST00000491574 CCDC88BA6NC98 1476 aa18.85■□□□□ 0.61
SMARCA2-217ENST00000491574 FBLN2P98095 1184 aa18.83■□□□□ 0.6
SMARCA2-217ENST00000491574 AQRO60306 1485 aaKnown RBP eCLIP18.82■□□□□ 0.6
SMARCA2-217ENST00000491574 EIF4G3O43432 1585 aaKnown RBP18.8■□□□□ 0.6
SMARCA2-217ENST00000491574 PRDM2Q13029 1718 aa18.8■□□□□ 0.6
SMARCA2-217ENST00000491574 ARAP1Q96P48 1450 aa18.77■□□□□ 0.59
SMARCA2-217ENST00000491574 CHD1O14646 1710 aa18.73■□□□□ 0.59
SMARCA2-217ENST00000491574 ABCC8Q09428 1581 aa18.71■□□□□ 0.59
SMARCA2-217ENST00000491574 DNMBPQ6XZF7 1577 aa18.7■□□□□ 0.58
SMARCA2-217ENST00000491574 TARBP1Q13395 1621 aaKnown RBP18.69■□□□□ 0.58
SMARCA2-217ENST00000491574 TDRD9Q8NDG6 1382 aaKnown RBP18.66■□□□□ 0.58
SMARCA2-217ENST00000491574 RAD54L2Q9Y4B4 1467 aa18.65■□□□□ 0.58
SMARCA2-217ENST00000491574 POLA1P09884 1462 aaPredicted RBP18.64■□□□□ 0.57
SMARCA2-217ENST00000491574 AEBP2Q6ZN18 517 aaPredicted RBP18.59■□□□□ 0.57
SMARCA2-217ENST00000491574 SOGA1O94964 1423 aa18.58■□□□□ 0.57
SMARCA2-217ENST00000491574 CHMP7Q8WUX9 453 aaPredicted RBP18.56■□□□□ 0.56
SMARCA2-217ENST00000491574 SNAPC4Q5SXM2 1469 aa18.55■□□□□ 0.56
SMARCA2-217ENST00000491574 CLASP1Q7Z460 1538 aa18.51■□□□□ 0.55
SMARCA2-217ENST00000491574 FGD5Q6ZNL6 1462 aa18.48■□□□□ 0.55
SMARCA2-217ENST00000491574 SYNJ1O43426 1573 aa18.43■□□□□ 0.54
SMARCA2-217ENST00000491574 GRIN2BQ13224 1484 aa18.41■□□□□ 0.54
SMARCA2-217ENST00000491574 MAGI1Q96QZ7 1491 aaPredicted RBP18.41■□□□□ 0.54
SMARCA2-217ENST00000491574 CUX1P39880 1505 aa18.41■□□□□ 0.54
SMARCA2-217ENST00000491574 SYNJ2O15056 1496 aa18.39■□□□□ 0.54
SMARCA2-217ENST00000491574 GAPVD1Q14C86 1478 aa18.39■□□□□ 0.53
SMARCA2-217ENST00000491574 WDR97A6NE52 1622 aa18.34■□□□□ 0.53
SMARCA2-217ENST00000491574 ERCC6L2Q5T890 1561 aa18.29■□□□□ 0.52
SMARCA2-217ENST00000491574 PBRM1Q86U86 1689 aa18.26■□□□□ 0.51
SMARCA2-217ENST00000491574 ABCA10Q8WWZ4 1543 aa18.2■□□□□ 0.5
SMARCA2-217ENST00000491574 ABCA5Q8WWZ7 1642 aa18.18■□□□□ 0.5
SMARCA2-217ENST00000491574 GRIN2AQ12879 1464 aa18.18■□□□□ 0.5
SMARCA2-217ENST00000491574 CEP170Q5SW79 1584 aa18.16■□□□□ 0.5
SMARCA2-217ENST00000491574 NUP160Q12769 1436 aa18.13■□□□□ 0.49
SMARCA2-217ENST00000491574 ADAMTS12P58397 1594 aa18.08■□□□□ 0.49
SMARCA2-217ENST00000491574 WRNQ14191 1432 aaPredicted RBP eCLIP18.08■□□□□ 0.49
SMARCA2-217ENST00000491574 FHAD1B1AJZ9 1412 aa18.06■□□□□ 0.48
SMARCA2-217ENST00000491574 SUPT5HO00267 1087 aaKnown RBP18.05■□□□□ 0.48
SMARCA2-217ENST00000491574 PRG4Q92954 1404 aaPredicted RBP18.05■□□□□ 0.48
SMARCA2-217ENST00000491574 SHROOM2Q13796 1616 aa18.05■□□□□ 0.48
SMARCA2-217ENST00000491574 FAM69CQ0P6D2 419 aa18.04■□□□□ 0.48
SMARCA2-217ENST00000491574 KIF13AQ9H1H9 1805 aa18.04■□□□□ 0.48
SMARCA2-217ENST00000491574 JPH4Q96JJ6 628 aa18.03■□□□□ 0.48
SMARCA2-217ENST00000491574 KDM4FA0A1W2PPD8 638 aa17.95■□□□□ 0.46
SMARCA2-217ENST00000491574 NPM1P06748 294 aaKnown RBP eCLIP17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms