RNA–Protein interactions for RNA: ENST00000491563.1

CCDC148-208, Transcript of coiled-coil domain containing 148, humanhuman

TSL 5

Gene CCDC148, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148-208ENST00000491563 NISCHQ9Y2I1 1504 aa41.59■■■■■ 4.25
CCDC148-208ENST00000491563 CCDC180Q9P1Z9 1646 aa37.21■■■■□ 3.55
CCDC148-208ENST00000491563 ABCC9O60706 1549 aa37.05■■■■□ 3.52
CCDC148-208ENST00000491563 RB1CC1Q8TDY2 1594 aa35.34■■■■□ 3.25
CCDC148-208ENST00000491563 NACADO15069 1562 aa35.15■■■■□ 3.22
CCDC148-208ENST00000491563 DCAF8L2P0C7V8 631 aa34.95■■■■□ 3.19
CCDC148-208ENST00000491563 MYO15BQ96JP2 1530 aa34.76■■■■□ 3.15
CCDC148-208ENST00000491563 DNAJC5BQ9UF47 199 aa34.67■■■■□ 3.14
CCDC148-208ENST00000491563 UNC13AQ9UPW8 1703 aa34.56■■■■□ 3.12
CCDC148-208ENST00000491563 PABPN1Q86U42 306 aaKnown RBP eCLIP34.53■■■■□ 3.12
CCDC148-208ENST00000491563 ZCCHC6Q5VYS8 1495 aaKnown RBP34.51■■■■□ 3.11
CCDC148-208ENST00000491563 DCAF1Q9Y4B6 1507 aa34.37■■■■□ 3.09
CCDC148-208ENST00000491563 BICRAQ9NZM4 1560 aa34.36■■■■□ 3.09
CCDC148-208ENST00000491563 SCRIBQ14160 1630 aa33.91■■■■□ 3.02
CCDC148-208ENST00000491563 SHROOM4Q9ULL8 1493 aa33.88■■■■□ 3.01
CCDC148-208ENST00000491563 CC2D2AQ9P2K1 1620 aa33.5■■■□□ 2.95
CCDC148-208ENST00000491563 EIF4G1Q04637 1599 aaKnown RBP33.47■■■□□ 2.95
CCDC148-208ENST00000491563 CECR2Q9BXF3 1484 aa33.37■■■□□ 2.93
CCDC148-208ENST00000491563 NCAPD3P42695 1498 aa32.48■■■□□ 2.79
CCDC148-208ENST00000491563 ATAD2BQ9ULI0 1458 aa32.4■■■□□ 2.78
CCDC148-208ENST00000491563 SMARCA4P51532 1647 aa32.39■■■□□ 2.78
CCDC148-208ENST00000491563 SMARCA2P51531 1590 aa32.28■■■□□ 2.76
CCDC148-208ENST00000491563 BAZ1AQ9NRL2 1556 aaPredicted RBP32.24■■■□□ 2.75
CCDC148-208ENST00000491563 HMGXB3Q12766 1538 aa32.23■■■□□ 2.75
CCDC148-208ENST00000491563 PEG3Q9GZU2 1588 aa32.1■■■□□ 2.73
CCDC148-208ENST00000491563 BAZ1BQ9UIG0 1483 aaKnown RBP32.05■■■□□ 2.72
CCDC148-208ENST00000491563 MROH2BQ7Z745 1585 aa32.05■■■□□ 2.72
CCDC148-208ENST00000491563 ERCC6Q03468 1493 aa31.95■■■□□ 2.7
CCDC148-208ENST00000491563 NESP48681 1621 aa31.9■■■□□ 2.7
CCDC148-208ENST00000491563 CUX2O14529 1486 aa31.87■■■□□ 2.69
CCDC148-208ENST00000491563 DNAJC5Q9H3Z4 198 aa31.69■■■□□ 2.66
CCDC148-208ENST00000491563 LAMC3Q9Y6N6 1575 aa31.68■■■□□ 2.66
CCDC148-208ENST00000491563 WIZO95785 1651 aa31.65■■■□□ 2.66
CCDC148-208ENST00000491563 THOC2Q8NI27 1593 aaKnown RBP31.54■■■□□ 2.64
CCDC148-208ENST00000491563 PDS5BQ9NTI5 1447 aa31.49■■■□□ 2.63
CCDC148-208ENST00000491563 CADPSQ9ULU8 1353 aa31.49■■■□□ 2.63
CCDC148-208ENST00000491563 KIF21AQ7Z4S6 1674 aa31.46■■■□□ 2.63
CCDC148-208ENST00000491563 RSF1Q96T23 1441 aaPredicted RBP31.45■■■□□ 2.63
CCDC148-208ENST00000491563 TOP2AP11388 1531 aaKnown RBP31.26■■■□□ 2.59
CCDC148-208ENST00000491563 MRC2Q9UBG0 1479 aa31.21■■■□□ 2.59
CCDC148-208ENST00000491563 CFTRP13569 1480 aa31.17■■■□□ 2.58
CCDC148-208ENST00000491563 WDR62O43379 1518 aa31.15■■■□□ 2.58
CCDC148-208ENST00000491563 FANCD2Q9BXW9 1451 aa31.12■■■□□ 2.57
CCDC148-208ENST00000491563 CEP164Q9UPV0 1460 aa31.12■■■□□ 2.57
CCDC148-208ENST00000491563 CCDC88BA6NC98 1476 aa30.92■■■□□ 2.54
CCDC148-208ENST00000491563 URB2Q14146 1524 aaKnown RBP30.87■■■□□ 2.53
CCDC148-208ENST00000491563 PRDM2Q13029 1718 aa30.83■■■□□ 2.53
CCDC148-208ENST00000491563 TOPBP1Q92547 1522 aa30.55■■■□□ 2.48
CCDC148-208ENST00000491563 IFT140Q96RY7 1462 aa30.5■■■□□ 2.47
CCDC148-208ENST00000491563 ABCC8Q09428 1581 aa30.48■■■□□ 2.47
CCDC148-208ENST00000491563 ZNF608Q9ULD9 1512 aaPredicted RBP30.47■■■□□ 2.47
CCDC148-208ENST00000491563 OSCARQ8IYS5 282 aa30.44■■■□□ 2.46
CCDC148-208ENST00000491563 DNMBPQ6XZF7 1577 aa30.44■■■□□ 2.46
CCDC148-208ENST00000491563 TRIM41Q8WV44 630 aa30.3■■■□□ 2.44
CCDC148-208ENST00000491563 TARBP1Q13395 1621 aaKnown RBP30.28■■■□□ 2.44
CCDC148-208ENST00000491563 EIF4G3O43432 1585 aaKnown RBP30.28■■■□□ 2.44
CCDC148-208ENST00000491563 POLA1P09884 1462 aaPredicted RBP30.26■■■□□ 2.44
CCDC148-208ENST00000491563 AQRO60306 1485 aaKnown RBP eCLIP30.19■■■□□ 2.42
CCDC148-208ENST00000491563 RAD54L2Q9Y4B4 1467 aa30.13■■■□□ 2.41
CCDC148-208ENST00000491563 SUPT5HO00267 1087 aaKnown RBP30.12■■■□□ 2.41
CCDC148-208ENST00000491563 SOGA1O94964 1423 aa30.1■■■□□ 2.41
CCDC148-208ENST00000491563 CUX1P39880 1505 aa30.1■■■□□ 2.41
CCDC148-208ENST00000491563 FGD5Q6ZNL6 1462 aa30.08■■■□□ 2.41
CCDC148-208ENST00000491563 RIMBP3CA6NJZ7 1639 aa30.03■■■□□ 2.4
CCDC148-208ENST00000491563 RIMBP3BA6NNM3 1639 aa30.03■■■□□ 2.4
CCDC148-208ENST00000491563 RIMBP3Q9UFD9 1639 aa30.03■■■□□ 2.4
CCDC148-208ENST00000491563 TDRD9Q8NDG6 1382 aaKnown RBP30.03■■■□□ 2.4
CCDC148-208ENST00000491563 CHD1O14646 1710 aa30.01■■■□□ 2.39
CCDC148-208ENST00000491563 ARHGEF11O15085 1522 aa29.96■■■□□ 2.39
CCDC148-208ENST00000491563 WDR97A6NE52 1622 aa29.96■■■□□ 2.39
CCDC148-208ENST00000491563 FBLN2P98095 1184 aa29.91■■■□□ 2.38
CCDC148-208ENST00000491563 SNAPC4Q5SXM2 1469 aa29.88■■■□□ 2.37
CCDC148-208ENST00000491563 GRIN2BQ13224 1484 aa29.82■■■□□ 2.36
CCDC148-208ENST00000491563 MAGI1Q96QZ7 1491 aaPredicted RBP29.81■■■□□ 2.36
CCDC148-208ENST00000491563 ABCA10Q8WWZ4 1543 aa29.76■■■□□ 2.36
CCDC148-208ENST00000491563 GAPVD1Q14C86 1478 aa29.74■■■□□ 2.35
CCDC148-208ENST00000491563 CHMP7Q8WUX9 453 aaPredicted RBP29.73■■■□□ 2.35
CCDC148-208ENST00000491563 CYB5RLQ6IPT4 315 aa29.71■■■□□ 2.35
CCDC148-208ENST00000491563 SYNJ2O15056 1496 aa29.71■■■□□ 2.35
CCDC148-208ENST00000491563 CLASP1Q7Z460 1538 aa29.71■■■□□ 2.35
CCDC148-208ENST00000491563 ARAP1Q96P48 1450 aa29.7■■■□□ 2.35
CCDC148-208ENST00000491563 ABCA5Q8WWZ7 1642 aa29.7■■■□□ 2.34
CCDC148-208ENST00000491563 PBRM1Q86U86 1689 aa29.69■■■□□ 2.34
CCDC148-208ENST00000491563 SYNJ1O43426 1573 aa29.66■■■□□ 2.34
CCDC148-208ENST00000491563 WRNQ14191 1432 aaPredicted RBP eCLIP29.65■■■□□ 2.34
CCDC148-208ENST00000491563 TOP2BQ02880 1626 aa29.64■■■□□ 2.34
CCDC148-208ENST00000491563 BIVM-ERCC5R4GMW8 1640 aa29.63■■■□□ 2.33
CCDC148-208ENST00000491563 ADAMTS12P58397 1594 aa29.46■■■□□ 2.31
CCDC148-208ENST00000491563 GRIN2AQ12879 1464 aa29.44■■■□□ 2.3
CCDC148-208ENST00000491563 ERICH3Q5RHP9 1530 aa29.38■■■□□ 2.29
CCDC148-208ENST00000491563 FHAD1B1AJZ9 1412 aa29.37■■■□□ 2.29
CCDC148-208ENST00000491563 NUP160Q12769 1436 aa29.37■■■□□ 2.29
CCDC148-208ENST00000491563 CEP170Q5SW79 1584 aa29.35■■■□□ 2.29
CCDC148-208ENST00000491563 TRHP20396 242 aaPredicted RBP29.28■■■□□ 2.28
CCDC148-208ENST00000491563 ERCC6L2Q5T890 1561 aa29.26■■■□□ 2.28
CCDC148-208ENST00000491563 SHROOM2Q13796 1616 aa29.2■■■□□ 2.27
CCDC148-208ENST00000491563 IGF1RP08069 1367 aa29.07■■■□□ 2.24
CCDC148-208ENST00000491563 KIF27Q86VH2 1401 aa29.05■■■□□ 2.24
CCDC148-208ENST00000491563 JPH4Q96JJ6 628 aa29.05■■■□□ 2.24
CCDC148-208ENST00000491563 RUSC2Q8N2Y8 1516 aa29.04■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms