RNA–Protein interactions for RNA: ENST00000491553.1

TBC1D1-212, Transcript of TBC1 domain family member 1, humanhuman

TSL 2

Gene TBC1D1, Length 455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D1-212ENST00000491553 AEBP2Q6ZN18 517 aaPredicted RBP17.99■□□□□ 0.47
TBC1D1-212ENST00000491553 NISCHQ9Y2I1 1504 aa17.33■□□□□ 0.37
TBC1D1-212ENST00000491553 CHIC1Q5VXU3 224 aa16.76■□□□□ 0.27
TBC1D1-212ENST00000491553 ABCC9O60706 1549 aa16.35■□□□□ 0.21
TBC1D1-212ENST00000491553 DNAJC5BQ9UF47 199 aa15.85■□□□□ 0.13
TBC1D1-212ENST00000491553 CCDC180Q9P1Z9 1646 aa15.76■□□□□ 0.11
TBC1D1-212ENST00000491553 SENP3Q9H4L4 574 aaPredicted RBP15.4■□□□□ 0.06
TBC1D1-212ENST00000491553 RB1CC1Q8TDY2 1594 aa15.24■□□□□ 0.03
TBC1D1-212ENST00000491553 PABPN1Q86U42 306 aaKnown RBP eCLIP15.14■□□□□ 0.01
TBC1D1-212ENST00000491553 PHF23Q9BUL5 403 aaPredicted RBP15.11■□□□□ 0.01
TBC1D1-212ENST00000491553 NACADO15069 1562 aa15□□□□□ -0.01
TBC1D1-212ENST00000491553 UNC13AQ9UPW8 1703 aa15□□□□□ -0.01
TBC1D1-212ENST00000491553 BICRAQ9NZM4 1560 aa14.91□□□□□ -0.02
TBC1D1-212ENST00000491553 DCAF8L2P0C7V8 631 aa14.86□□□□□ -0.03
TBC1D1-212ENST00000491553 DNAJC5Q9H3Z4 198 aa14.85□□□□□ -0.03
TBC1D1-212ENST00000491553 CECR2Q9BXF3 1484 aa14.75□□□□□ -0.05
TBC1D1-212ENST00000491553 CC2D2AQ9P2K1 1620 aa14.72□□□□□ -0.05
TBC1D1-212ENST00000491553 POTEDQ86YR6 584 aa14.63□□□□□ -0.07
TBC1D1-212ENST00000491553 MYO15BQ96JP2 1530 aa14.59□□□□□ -0.07
TBC1D1-212ENST00000491553 EIF4G1Q04637 1599 aaKnown RBP14.55□□□□□ -0.08
TBC1D1-212ENST00000491553 SHROOM4Q9ULL8 1493 aa14.51□□□□□ -0.09
TBC1D1-212ENST00000491553 FOXD1Q16676 465 aa14.44□□□□□ -0.1
TBC1D1-212ENST00000491553 SCRIBQ14160 1630 aa14.41□□□□□ -0.1
TBC1D1-212ENST00000491553 ZCCHC6Q5VYS8 1495 aaKnown RBP14.26□□□□□ -0.13
TBC1D1-212ENST00000491553 DCAF1Q9Y4B6 1507 aa14.23□□□□□ -0.13
TBC1D1-212ENST00000491553 CUX2O14529 1486 aa14.22□□□□□ -0.13
TBC1D1-212ENST00000491553 ERCC6Q03468 1493 aa14.1□□□□□ -0.15
TBC1D1-212ENST00000491553 TRIM41Q8WV44 630 aa14.02□□□□□ -0.17
TBC1D1-212ENST00000491553 NESP48681 1621 aa13.92□□□□□ -0.18
TBC1D1-212ENST00000491553 NCAPD3P42695 1498 aa13.87□□□□□ -0.19
TBC1D1-212ENST00000491553 THOC2Q8NI27 1593 aaKnown RBP13.85□□□□□ -0.19
TBC1D1-212ENST00000491553 ATAD2BQ9ULI0 1458 aa13.79□□□□□ -0.2
TBC1D1-212ENST00000491553 MSH5O43196 834 aa13.77□□□□□ -0.21
TBC1D1-212ENST00000491553 SMARCA2P51531 1590 aa13.75□□□□□ -0.21
TBC1D1-212ENST00000491553 HMGXB3Q12766 1538 aa13.72□□□□□ -0.21
TBC1D1-212ENST00000491553 KIF21AQ7Z4S6 1674 aa13.71□□□□□ -0.21
TBC1D1-212ENST00000491553 SMARCA4P51532 1647 aa13.65□□□□□ -0.22
TBC1D1-212ENST00000491553 LAMC3Q9Y6N6 1575 aa13.63□□□□□ -0.23
TBC1D1-212ENST00000491553 BAZ1BQ9UIG0 1483 aaKnown RBP13.61□□□□□ -0.23
TBC1D1-212ENST00000491553 BAZ1AQ9NRL2 1556 aaPredicted RBP13.58□□□□□ -0.23
TBC1D1-212ENST00000491553 PDS5BQ9NTI5 1447 aa13.56□□□□□ -0.24
TBC1D1-212ENST00000491553 MRC2Q9UBG0 1479 aa13.52□□□□□ -0.25
TBC1D1-212ENST00000491553 WDR62O43379 1518 aa13.51□□□□□ -0.25
TBC1D1-212ENST00000491553 PEG3Q9GZU2 1588 aa13.49□□□□□ -0.25
TBC1D1-212ENST00000491553 OSCARQ8IYS5 282 aa13.47□□□□□ -0.25
TBC1D1-212ENST00000491553 RIMBP3CA6NJZ7 1639 aa13.44□□□□□ -0.26
TBC1D1-212ENST00000491553 RIMBP3BA6NNM3 1639 aa13.44□□□□□ -0.26
TBC1D1-212ENST00000491553 RIMBP3Q9UFD9 1639 aa13.44□□□□□ -0.26
TBC1D1-212ENST00000491553 CADPSQ9ULU8 1353 aa13.43□□□□□ -0.26
TBC1D1-212ENST00000491553 MROH2BQ7Z745 1585 aa13.4□□□□□ -0.26
TBC1D1-212ENST00000491553 CEP164Q9UPV0 1460 aa13.36□□□□□ -0.27
TBC1D1-212ENST00000491553 PIAS4Q8N2W9 510 aaPredicted RBP13.34□□□□□ -0.27
TBC1D1-212ENST00000491553 ARHGEF11O15085 1522 aa13.33□□□□□ -0.28
TBC1D1-212ENST00000491553 FANCD2Q9BXW9 1451 aa13.3□□□□□ -0.28
TBC1D1-212ENST00000491553 PPP6R1Q9UPN7 881 aa13.29□□□□□ -0.28
TBC1D1-212ENST00000491553 URB2Q14146 1524 aaKnown RBP13.27□□□□□ -0.29
TBC1D1-212ENST00000491553 TRHP20396 242 aaPredicted RBP13.25□□□□□ -0.29
TBC1D1-212ENST00000491553 CYB5RLQ6IPT4 315 aa13.25□□□□□ -0.29
TBC1D1-212ENST00000491553 PLPPR3Q6T4P5 718 aa13.23□□□□□ -0.29
TBC1D1-212ENST00000491553 ADRA2BP18089 450 aa13.22□□□□□ -0.29
TBC1D1-212ENST00000491553 WIZO95785 1651 aa13.21□□□□□ -0.29
TBC1D1-212ENST00000491553 ZNF608Q9ULD9 1512 aaPredicted RBP13.21□□□□□ -0.29
TBC1D1-212ENST00000491553 ARAP1Q96P48 1450 aa13.19□□□□□ -0.3
TBC1D1-212ENST00000491553 CFTRP13569 1480 aa13.17□□□□□ -0.3
TBC1D1-212ENST00000491553 CHD1O14646 1710 aa13.1□□□□□ -0.31
TBC1D1-212ENST00000491553 IFT140Q96RY7 1462 aa13.09□□□□□ -0.31
TBC1D1-212ENST00000491553 EIF4G3O43432 1585 aaKnown RBP13.08□□□□□ -0.32
TBC1D1-212ENST00000491553 PRDM2Q13029 1718 aa13.02□□□□□ -0.33
TBC1D1-212ENST00000491553 RSF1Q96T23 1441 aaPredicted RBP13.01□□□□□ -0.33
TBC1D1-212ENST00000491553 TOPBP1Q92547 1522 aa13□□□□□ -0.33
TBC1D1-212ENST00000491553 AQRO60306 1485 aaKnown RBP eCLIP12.99□□□□□ -0.33
TBC1D1-212ENST00000491553 FBLN2P98095 1184 aa12.98□□□□□ -0.33
TBC1D1-212ENST00000491553 TOP2AP11388 1531 aaKnown RBP12.96□□□□□ -0.33
TBC1D1-212ENST00000491553 TARBP1Q13395 1621 aaKnown RBP12.94□□□□□ -0.34
TBC1D1-212ENST00000491553 CLASP1Q7Z460 1538 aa12.91□□□□□ -0.34
TBC1D1-212ENST00000491553 DNMBPQ6XZF7 1577 aa12.89□□□□□ -0.35
TBC1D1-212ENST00000491553 CCDC88BA6NC98 1476 aa12.85□□□□□ -0.35
TBC1D1-212ENST00000491553 SNAPC4Q5SXM2 1469 aa12.85□□□□□ -0.35
TBC1D1-212ENST00000491553 ABCC8Q09428 1581 aa12.84□□□□□ -0.35
TBC1D1-212ENST00000491553 POLA1P09884 1462 aaPredicted RBP12.84□□□□□ -0.35
TBC1D1-212ENST00000491553 RAD54L2Q9Y4B4 1467 aa12.83□□□□□ -0.36
TBC1D1-212ENST00000491553 TDRD9Q8NDG6 1382 aaKnown RBP12.82□□□□□ -0.36
TBC1D1-212ENST00000491553 SYNJ1O43426 1573 aa12.81□□□□□ -0.36
TBC1D1-212ENST00000491553 ILDR1Q86SU0 546 aaPredicted RBP12.8□□□□□ -0.36
TBC1D1-212ENST00000491553 GAPVD1Q14C86 1478 aa12.79□□□□□ -0.36
TBC1D1-212ENST00000491553 CHMP7Q8WUX9 453 aaPredicted RBP12.76□□□□□ -0.37
TBC1D1-212ENST00000491553 ERCC6L2Q5T890 1561 aa12.74□□□□□ -0.37
TBC1D1-212ENST00000491553 SOGA1O94964 1423 aa12.74□□□□□ -0.37
TBC1D1-212ENST00000491553 MAGI1Q96QZ7 1491 aaPredicted RBP12.72□□□□□ -0.37
TBC1D1-212ENST00000491553 SYNJ2O15056 1496 aa12.71□□□□□ -0.38
TBC1D1-212ENST00000491553 KIF13AQ9H1H9 1805 aa12.7□□□□□ -0.38
TBC1D1-212ENST00000491553 GRIN2BQ13224 1484 aa12.68□□□□□ -0.38
TBC1D1-212ENST00000491553 FGD5Q6ZNL6 1462 aa12.68□□□□□ -0.38
TBC1D1-212ENST00000491553 WDR97A6NE52 1622 aa12.68□□□□□ -0.38
TBC1D1-212ENST00000491553 PBRM1Q86U86 1689 aa12.65□□□□□ -0.38
TBC1D1-212ENST00000491553 KDM4FA0A1W2PPD8 638 aa12.65□□□□□ -0.38
TBC1D1-212ENST00000491553 CUX1P39880 1505 aa12.62□□□□□ -0.39
TBC1D1-212ENST00000491553 CEP170Q5SW79 1584 aa12.6□□□□□ -0.39
TBC1D1-212ENST00000491553 GRIN2AQ12879 1464 aa12.54□□□□□ -0.4
TBC1D1-212ENST00000491553 ABCA5Q8WWZ7 1642 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms