RNA–Protein interactions for RNA: ENST00000491460.5

CPA1-208, Transcript of carboxypeptidase A1, humanhuman

TSL 2

Gene CPA1, Length 1,063 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPA1-208ENST00000491460 NISCHQ9Y2I1 1504 aa36.34■■■■□ 3.41
CPA1-208ENST00000491460 ABCC9O60706 1549 aa32.79■■■□□ 2.84
CPA1-208ENST00000491460 CCDC180Q9P1Z9 1646 aa32.66■■■□□ 2.82
CPA1-208ENST00000491460 RB1CC1Q8TDY2 1594 aa31.18■■■□□ 2.58
CPA1-208ENST00000491460 NACADO15069 1562 aa30.94■■■□□ 2.54
CPA1-208ENST00000491460 DNAJC5BQ9UF47 199 aa30.84■■■□□ 2.53
CPA1-208ENST00000491460 DCAF8L2P0C7V8 631 aa30.74■■■□□ 2.51
CPA1-208ENST00000491460 PABPN1Q86U42 306 aaKnown RBP eCLIP30.5■■■□□ 2.47
CPA1-208ENST00000491460 MYO15BQ96JP2 1530 aa30.49■■■□□ 2.47
CPA1-208ENST00000491460 UNC13AQ9UPW8 1703 aa30.34■■■□□ 2.45
CPA1-208ENST00000491460 BICRAQ9NZM4 1560 aa30.22■■■□□ 2.43
CPA1-208ENST00000491460 ZCCHC6Q5VYS8 1495 aaKnown RBP30.11■■■□□ 2.41
CPA1-208ENST00000491460 DCAF1Q9Y4B6 1507 aa30.04■■■□□ 2.4
CPA1-208ENST00000491460 SHROOM4Q9ULL8 1493 aa29.92■■■□□ 2.38
CPA1-208ENST00000491460 SCRIBQ14160 1630 aa29.74■■■□□ 2.35
CPA1-208ENST00000491460 CC2D2AQ9P2K1 1620 aa29.6■■■□□ 2.33
CPA1-208ENST00000491460 CECR2Q9BXF3 1484 aa29.58■■■□□ 2.33
CPA1-208ENST00000491460 EIF4G1Q04637 1599 aaKnown RBP29.52■■■□□ 2.32
CPA1-208ENST00000491460 NCAPD3P42695 1498 aa28.57■■■□□ 2.16
CPA1-208ENST00000491460 DNAJC5Q9H3Z4 198 aa28.47■■■□□ 2.15
CPA1-208ENST00000491460 ATAD2BQ9ULI0 1458 aa28.46■■■□□ 2.15
CPA1-208ENST00000491460 SMARCA2P51531 1590 aa28.38■■■□□ 2.13
CPA1-208ENST00000491460 CUX2O14529 1486 aa28.37■■■□□ 2.13
CPA1-208ENST00000491460 ERCC6Q03468 1493 aa28.37■■■□□ 2.13
CPA1-208ENST00000491460 SMARCA4P51532 1647 aa28.36■■■□□ 2.13
CPA1-208ENST00000491460 HMGXB3Q12766 1538 aa28.34■■■□□ 2.13
CPA1-208ENST00000491460 BAZ1AQ9NRL2 1556 aaPredicted RBP28.24■■■□□ 2.11
CPA1-208ENST00000491460 BAZ1BQ9UIG0 1483 aaKnown RBP28.18■■■□□ 2.1
CPA1-208ENST00000491460 NESP48681 1621 aa28.11■■■□□ 2.09
CPA1-208ENST00000491460 PEG3Q9GZU2 1588 aa28.11■■■□□ 2.09
CPA1-208ENST00000491460 MROH2BQ7Z745 1585 aa27.98■■■□□ 2.07
CPA1-208ENST00000491460 LAMC3Q9Y6N6 1575 aa27.93■■■□□ 2.06
CPA1-208ENST00000491460 THOC2Q8NI27 1593 aaKnown RBP27.86■■■□□ 2.05
CPA1-208ENST00000491460 PDS5BQ9NTI5 1447 aa27.82■■■□□ 2.04
CPA1-208ENST00000491460 KIF21AQ7Z4S6 1674 aa27.71■■■□□ 2.03
CPA1-208ENST00000491460 CADPSQ9ULU8 1353 aa27.71■■■□□ 2.03
CPA1-208ENST00000491460 WIZO95785 1651 aa27.6■■■□□ 2.01
CPA1-208ENST00000491460 MRC2Q9UBG0 1479 aa27.56■■■□□ 2
CPA1-208ENST00000491460 WDR62O43379 1518 aa27.48■■□□□ 1.99
CPA1-208ENST00000491460 CEP164Q9UPV0 1460 aa27.43■■□□□ 1.98
CPA1-208ENST00000491460 RSF1Q96T23 1441 aaPredicted RBP27.38■■□□□ 1.97
CPA1-208ENST00000491460 FANCD2Q9BXW9 1451 aa27.38■■□□□ 1.97
CPA1-208ENST00000491460 CFTRP13569 1480 aa27.35■■□□□ 1.97
CPA1-208ENST00000491460 TOP2AP11388 1531 aaKnown RBP27.31■■□□□ 1.96
CPA1-208ENST00000491460 TRIM41Q8WV44 630 aa27.16■■□□□ 1.94
CPA1-208ENST00000491460 URB2Q14146 1524 aaKnown RBP27.13■■□□□ 1.93
CPA1-208ENST00000491460 OSCARQ8IYS5 282 aa27.04■■□□□ 1.92
CPA1-208ENST00000491460 CCDC88BA6NC98 1476 aa26.99■■□□□ 1.91
CPA1-208ENST00000491460 PRDM2Q13029 1718 aa26.98■■□□□ 1.91
CPA1-208ENST00000491460 IFT140Q96RY7 1462 aa26.9■■□□□ 1.9
CPA1-208ENST00000491460 TOPBP1Q92547 1522 aa26.83■■□□□ 1.89
CPA1-208ENST00000491460 ZNF608Q9ULD9 1512 aaPredicted RBP26.81■■□□□ 1.88
CPA1-208ENST00000491460 ABCC8Q09428 1581 aa26.8■■□□□ 1.88
CPA1-208ENST00000491460 DNMBPQ6XZF7 1577 aa26.72■■□□□ 1.87
CPA1-208ENST00000491460 EIF4G3O43432 1585 aaKnown RBP26.66■■□□□ 1.86
CPA1-208ENST00000491460 RIMBP3CA6NJZ7 1639 aa26.65■■□□□ 1.86
CPA1-208ENST00000491460 RIMBP3BA6NNM3 1639 aa26.65■■□□□ 1.86
CPA1-208ENST00000491460 RIMBP3Q9UFD9 1639 aa26.65■■□□□ 1.86
CPA1-208ENST00000491460 ARHGEF11O15085 1522 aa26.59■■□□□ 1.85
CPA1-208ENST00000491460 TARBP1Q13395 1621 aaKnown RBP26.57■■□□□ 1.84
CPA1-208ENST00000491460 AQRO60306 1485 aaKnown RBP eCLIP26.56■■□□□ 1.84
CPA1-208ENST00000491460 POLA1P09884 1462 aaPredicted RBP26.55■■□□□ 1.84
CPA1-208ENST00000491460 RAD54L2Q9Y4B4 1467 aa26.44■■□□□ 1.82
CPA1-208ENST00000491460 FBLN2P98095 1184 aa26.44■■□□□ 1.82
CPA1-208ENST00000491460 SOGA1O94964 1423 aa26.44■■□□□ 1.82
CPA1-208ENST00000491460 CHD1O14646 1710 aa26.44■■□□□ 1.82
CPA1-208ENST00000491460 TDRD9Q8NDG6 1382 aaKnown RBP26.39■■□□□ 1.82
CPA1-208ENST00000491460 CYB5RLQ6IPT4 315 aa26.39■■□□□ 1.82
CPA1-208ENST00000491460 FGD5Q6ZNL6 1462 aa26.36■■□□□ 1.81
CPA1-208ENST00000491460 WDR97A6NE52 1622 aa26.36■■□□□ 1.81
CPA1-208ENST00000491460 SNAPC4Q5SXM2 1469 aa26.31■■□□□ 1.8
CPA1-208ENST00000491460 ARAP1Q96P48 1450 aa26.31■■□□□ 1.8
CPA1-208ENST00000491460 CUX1P39880 1505 aa26.3■■□□□ 1.8
CPA1-208ENST00000491460 MAGI1Q96QZ7 1491 aaPredicted RBP26.25■■□□□ 1.79
CPA1-208ENST00000491460 GRIN2BQ13224 1484 aa26.24■■□□□ 1.79
CPA1-208ENST00000491460 CHMP7Q8WUX9 453 aaPredicted RBP26.24■■□□□ 1.79
CPA1-208ENST00000491460 SYNJ1O43426 1573 aa26.2■■□□□ 1.78
CPA1-208ENST00000491460 CLASP1Q7Z460 1538 aa26.19■■□□□ 1.78
CPA1-208ENST00000491460 SYNJ2O15056 1496 aa26.17■■□□□ 1.78
CPA1-208ENST00000491460 TRHP20396 242 aaPredicted RBP26.16■■□□□ 1.78
CPA1-208ENST00000491460 GAPVD1Q14C86 1478 aa26.11■■□□□ 1.77
CPA1-208ENST00000491460 ABCA10Q8WWZ4 1543 aa26.08■■□□□ 1.77
CPA1-208ENST00000491460 SUPT5HO00267 1087 aaKnown RBP26.06■■□□□ 1.76
CPA1-208ENST00000491460 PBRM1Q86U86 1689 aa26.05■■□□□ 1.76
CPA1-208ENST00000491460 ABCA5Q8WWZ7 1642 aa26.02■■□□□ 1.76
CPA1-208ENST00000491460 WRNQ14191 1432 aaPredicted RBP eCLIP25.96■■□□□ 1.75
CPA1-208ENST00000491460 GRIN2AQ12879 1464 aa25.89■■□□□ 1.73
CPA1-208ENST00000491460 TOP2BQ02880 1626 aa25.85■■□□□ 1.73
CPA1-208ENST00000491460 ADAMTS12P58397 1594 aa25.85■■□□□ 1.73
CPA1-208ENST00000491460 BIVM-ERCC5R4GMW8 1640 aa25.84■■□□□ 1.73
CPA1-208ENST00000491460 NUP160Q12769 1436 aa25.81■■□□□ 1.72
CPA1-208ENST00000491460 FHAD1B1AJZ9 1412 aa25.8■■□□□ 1.72
CPA1-208ENST00000491460 CEP170Q5SW79 1584 aa25.77■■□□□ 1.72
CPA1-208ENST00000491460 ERICH3Q5RHP9 1530 aa25.74■■□□□ 1.71
CPA1-208ENST00000491460 ERCC6L2Q5T890 1561 aa25.73■■□□□ 1.71
CPA1-208ENST00000491460 SHROOM2Q13796 1616 aa25.67■■□□□ 1.7
CPA1-208ENST00000491460 PRG4Q92954 1404 aaPredicted RBP25.57■■□□□ 1.68
CPA1-208ENST00000491460 JPH4Q96JJ6 628 aa25.54■■□□□ 1.68
CPA1-208ENST00000491460 AEBP2Q6ZN18 517 aaPredicted RBP25.52■■□□□ 1.68
CPA1-208ENST00000491460 RUSC2Q8N2Y8 1516 aa25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms