RNA–Protein interactions for RNA: ENST00000491288.5

DNMT3A-214, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-214ENST00000491288 NISCHQ9Y2I1 1504 aa32.77■■■□□ 2.84
DNMT3A-214ENST00000491288 ABCC9O60706 1549 aa29.36■■■□□ 2.29
DNMT3A-214ENST00000491288 CCDC180Q9P1Z9 1646 aa29.34■■■□□ 2.29
DNMT3A-214ENST00000491288 RB1CC1Q8TDY2 1594 aa27.95■■■□□ 2.07
DNMT3A-214ENST00000491288 NACADO15069 1562 aa27.81■■■□□ 2.04
DNMT3A-214ENST00000491288 DNAJC5BQ9UF47 199 aa27.7■■■□□ 2.02
DNMT3A-214ENST00000491288 DCAF8L2P0C7V8 631 aa27.53■■■□□ 2
DNMT3A-214ENST00000491288 MYO15BQ96JP2 1530 aa27.52■■■□□ 2
DNMT3A-214ENST00000491288 PABPN1Q86U42 306 aaKnown RBP eCLIP27.36■■□□□ 1.97
DNMT3A-214ENST00000491288 UNC13AQ9UPW8 1703 aa27.21■■□□□ 1.95
DNMT3A-214ENST00000491288 BICRAQ9NZM4 1560 aa27.2■■□□□ 1.94
DNMT3A-214ENST00000491288 ZCCHC6Q5VYS8 1495 aaKnown RBP27.16■■□□□ 1.94
DNMT3A-214ENST00000491288 DCAF1Q9Y4B6 1507 aa27.13■■□□□ 1.93
DNMT3A-214ENST00000491288 SHROOM4Q9ULL8 1493 aa26.9■■□□□ 1.9
DNMT3A-214ENST00000491288 SCRIBQ14160 1630 aa26.66■■□□□ 1.86
DNMT3A-214ENST00000491288 CC2D2AQ9P2K1 1620 aa26.53■■□□□ 1.84
DNMT3A-214ENST00000491288 EIF4G1Q04637 1599 aaKnown RBP26.5■■□□□ 1.83
DNMT3A-214ENST00000491288 CECR2Q9BXF3 1484 aa26.5■■□□□ 1.83
DNMT3A-214ENST00000491288 NCAPD3P42695 1498 aa25.75■■□□□ 1.71
DNMT3A-214ENST00000491288 ATAD2BQ9ULI0 1458 aa25.61■■□□□ 1.69
DNMT3A-214ENST00000491288 SMARCA4P51532 1647 aa25.5■■□□□ 1.67
DNMT3A-214ENST00000491288 SMARCA2P51531 1590 aa25.49■■□□□ 1.67
DNMT3A-214ENST00000491288 HMGXB3Q12766 1538 aa25.48■■□□□ 1.67
DNMT3A-214ENST00000491288 DNAJC5Q9H3Z4 198 aa25.47■■□□□ 1.67
DNMT3A-214ENST00000491288 BAZ1AQ9NRL2 1556 aaPredicted RBP25.41■■□□□ 1.66
DNMT3A-214ENST00000491288 CUX2O14529 1486 aa25.4■■□□□ 1.66
DNMT3A-214ENST00000491288 PEG3Q9GZU2 1588 aa25.35■■□□□ 1.65
DNMT3A-214ENST00000491288 ERCC6Q03468 1493 aa25.33■■□□□ 1.65
DNMT3A-214ENST00000491288 BAZ1BQ9UIG0 1483 aaKnown RBP25.29■■□□□ 1.64
DNMT3A-214ENST00000491288 NESP48681 1621 aa25.24■■□□□ 1.63
DNMT3A-214ENST00000491288 MROH2BQ7Z745 1585 aa25.22■■□□□ 1.63
DNMT3A-214ENST00000491288 LAMC3Q9Y6N6 1575 aa25.07■■□□□ 1.6
DNMT3A-214ENST00000491288 THOC2Q8NI27 1593 aaKnown RBP24.98■■□□□ 1.59
DNMT3A-214ENST00000491288 PDS5BQ9NTI5 1447 aa24.96■■□□□ 1.59
DNMT3A-214ENST00000491288 CADPSQ9ULU8 1353 aa24.93■■□□□ 1.58
DNMT3A-214ENST00000491288 WIZO95785 1651 aa24.84■■□□□ 1.57
DNMT3A-214ENST00000491288 KIF21AQ7Z4S6 1674 aa24.81■■□□□ 1.56
DNMT3A-214ENST00000491288 RSF1Q96T23 1441 aaPredicted RBP24.74■■□□□ 1.55
DNMT3A-214ENST00000491288 MRC2Q9UBG0 1479 aa24.72■■□□□ 1.55
DNMT3A-214ENST00000491288 WDR62O43379 1518 aa24.68■■□□□ 1.54
DNMT3A-214ENST00000491288 CFTRP13569 1480 aa24.65■■□□□ 1.54
DNMT3A-214ENST00000491288 FANCD2Q9BXW9 1451 aa24.59■■□□□ 1.53
DNMT3A-214ENST00000491288 CEP164Q9UPV0 1460 aa24.59■■□□□ 1.53
DNMT3A-214ENST00000491288 TOP2AP11388 1531 aaKnown RBP24.59■■□□□ 1.53
DNMT3A-214ENST00000491288 URB2Q14146 1524 aaKnown RBP24.4■■□□□ 1.5
DNMT3A-214ENST00000491288 CCDC88BA6NC98 1476 aa24.33■■□□□ 1.49
DNMT3A-214ENST00000491288 SUPT5HO00267 1087 aaKnown RBP24.24■■□□□ 1.47
DNMT3A-214ENST00000491288 OSCARQ8IYS5 282 aa24.23■■□□□ 1.47
DNMT3A-214ENST00000491288 PRDM2Q13029 1718 aa24.17■■□□□ 1.46
DNMT3A-214ENST00000491288 TRIM41Q8WV44 630 aa24.16■■□□□ 1.46
DNMT3A-214ENST00000491288 IFT140Q96RY7 1462 aa24.15■■□□□ 1.46
DNMT3A-214ENST00000491288 TOPBP1Q92547 1522 aa24.12■■□□□ 1.45
DNMT3A-214ENST00000491288 ABCC8Q09428 1581 aa24.1■■□□□ 1.45
DNMT3A-214ENST00000491288 ZNF608Q9ULD9 1512 aaPredicted RBP24.1■■□□□ 1.45
DNMT3A-214ENST00000491288 DNMBPQ6XZF7 1577 aa24■■□□□ 1.43
DNMT3A-214ENST00000491288 TARBP1Q13395 1621 aaKnown RBP23.91■■□□□ 1.42
DNMT3A-214ENST00000491288 EIF4G3O43432 1585 aaKnown RBP23.9■■□□□ 1.42
DNMT3A-214ENST00000491288 POLA1P09884 1462 aaPredicted RBP23.89■■□□□ 1.42
DNMT3A-214ENST00000491288 AQRO60306 1485 aaKnown RBP eCLIP23.87■■□□□ 1.412e-7■■■□□ 18.4
DNMT3A-214ENST00000491288 RIMBP3CA6NJZ7 1639 aa23.83■■□□□ 1.41
DNMT3A-214ENST00000491288 RIMBP3BA6NNM3 1639 aa23.83■■□□□ 1.41
DNMT3A-214ENST00000491288 RIMBP3Q9UFD9 1639 aa23.83■■□□□ 1.41
DNMT3A-214ENST00000491288 ARHGEF11O15085 1522 aa23.81■■□□□ 1.4
DNMT3A-214ENST00000491288 SOGA1O94964 1423 aa23.77■■□□□ 1.4
DNMT3A-214ENST00000491288 RAD54L2Q9Y4B4 1467 aa23.77■■□□□ 1.4
DNMT3A-214ENST00000491288 TDRD9Q8NDG6 1382 aaKnown RBP23.73■■□□□ 1.39
DNMT3A-214ENST00000491288 FGD5Q6ZNL6 1462 aa23.7■■□□□ 1.38
DNMT3A-214ENST00000491288 CUX1P39880 1505 aa23.69■■□□□ 1.38
DNMT3A-214ENST00000491288 WDR97A6NE52 1622 aa23.68■■□□□ 1.38
DNMT3A-214ENST00000491288 CHD1O14646 1710 aa23.64■■□□□ 1.38
DNMT3A-214ENST00000491288 FBLN2P98095 1184 aa23.64■■□□□ 1.37
DNMT3A-214ENST00000491288 CYB5RLQ6IPT4 315 aa23.62■■□□□ 1.37
DNMT3A-214ENST00000491288 SNAPC4Q5SXM2 1469 aa23.6■■□□□ 1.37
DNMT3A-214ENST00000491288 ARAP1Q96P48 1450 aa23.58■■□□□ 1.37
DNMT3A-214ENST00000491288 MAGI1Q96QZ7 1491 aaPredicted RBP23.58■■□□□ 1.37
DNMT3A-214ENST00000491288 GRIN2BQ13224 1484 aa23.57■■□□□ 1.36
DNMT3A-214ENST00000491288 CHMP7Q8WUX9 453 aaPredicted RBP23.53■■□□□ 1.36
DNMT3A-214ENST00000491288 CLASP1Q7Z460 1538 aa23.53■■□□□ 1.36
DNMT3A-214ENST00000491288 SYNJ2O15056 1496 aa23.5■■□□□ 1.35
DNMT3A-214ENST00000491288 ABCA10Q8WWZ4 1543 aa23.49■■□□□ 1.35
DNMT3A-214ENST00000491288 GAPVD1Q14C86 1478 aa23.47■■□□□ 1.35
DNMT3A-214ENST00000491288 SYNJ1O43426 1573 aa23.45■■□□□ 1.34
DNMT3A-214ENST00000491288 ABCA5Q8WWZ7 1642 aa23.4■■□□□ 1.34
DNMT3A-214ENST00000491288 WRNQ14191 1432 aaPredicted RBP eCLIP23.37■■□□□ 1.33
DNMT3A-214ENST00000491288 PBRM1Q86U86 1689 aa23.33■■□□□ 1.33
DNMT3A-214ENST00000491288 TRHP20396 242 aaPredicted RBP23.3■■□□□ 1.32
DNMT3A-214ENST00000491288 TOP2BQ02880 1626 aa23.29■■□□□ 1.32
DNMT3A-214ENST00000491288 BIVM-ERCC5R4GMW8 1640 aa23.26■■□□□ 1.31
DNMT3A-214ENST00000491288 GRIN2AQ12879 1464 aa23.26■■□□□ 1.31
DNMT3A-214ENST00000491288 NUP160Q12769 1436 aa23.25■■□□□ 1.31
DNMT3A-214ENST00000491288 ADAMTS12P58397 1594 aa23.2■■□□□ 1.3
DNMT3A-214ENST00000491288 FHAD1B1AJZ9 1412 aa23.2■■□□□ 1.3
DNMT3A-214ENST00000491288 ERICH3Q5RHP9 1530 aa23.17■■□□□ 1.3
DNMT3A-214ENST00000491288 CEP170Q5SW79 1584 aa23.15■■□□□ 1.3
DNMT3A-214ENST00000491288 ERCC6L2Q5T890 1561 aa23.11■■□□□ 1.29
DNMT3A-214ENST00000491288 SHROOM2Q13796 1616 aa23.08■■□□□ 1.29
DNMT3A-214ENST00000491288 JPH4Q96JJ6 628 aa22.98■■□□□ 1.27
DNMT3A-214ENST00000491288 PRG4Q92954 1404 aaPredicted RBP22.96■■□□□ 1.27
DNMT3A-214ENST00000491288 IGF1RP08069 1367 aa22.92■■□□□ 1.26
DNMT3A-214ENST00000491288 RUSC2Q8N2Y8 1516 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms