RNA–Protein interactions for RNA: ENST00000491282.5

SOX2-OT-212, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 882 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-212ENST00000491282 NISCHQ9Y2I1 1504 aa27.91■■■□□ 2.06
SOX2-OT-212ENST00000491282 AEBP2Q6ZN18 517 aaPredicted RBP25.8■■□□□ 1.72
SOX2-OT-212ENST00000491282 CHIC1Q5VXU3 224 aa25.72■■□□□ 1.71
SOX2-OT-212ENST00000491282 CCDC180Q9P1Z9 1646 aa24.76■■□□□ 1.55
SOX2-OT-212ENST00000491282 ABCC9O60706 1549 aa24.56■■□□□ 1.52
SOX2-OT-212ENST00000491282 DCAF8L2P0C7V8 631 aa23.57■■□□□ 1.36
SOX2-OT-212ENST00000491282 RB1CC1Q8TDY2 1594 aa23.45■■□□□ 1.34
SOX2-OT-212ENST00000491282 NACADO15069 1562 aa23.39■■□□□ 1.33
SOX2-OT-212ENST00000491282 ZCCHC6Q5VYS8 1495 aaKnown RBP23.19■■□□□ 1.3
SOX2-OT-212ENST00000491282 MYO15BQ96JP2 1530 aa23.16■■□□□ 1.3
SOX2-OT-212ENST00000491282 DCAF1Q9Y4B6 1507 aa23.02■■□□□ 1.28
SOX2-OT-212ENST00000491282 PABPN1Q86U42 306 aaKnown RBP eCLIP23.01■■□□□ 1.27
SOX2-OT-212ENST00000491282 UNC13AQ9UPW8 1703 aa22.86■■□□□ 1.25
SOX2-OT-212ENST00000491282 DNAJC5BQ9UF47 199 aa22.78■■□□□ 1.24
SOX2-OT-212ENST00000491282 BICRAQ9NZM4 1560 aa22.77■■□□□ 1.24
SOX2-OT-212ENST00000491282 SCRIBQ14160 1630 aa22.7■■□□□ 1.22
SOX2-OT-212ENST00000491282 PHF23Q9BUL5 403 aaPredicted RBP22.69■■□□□ 1.22
SOX2-OT-212ENST00000491282 SHROOM4Q9ULL8 1493 aa22.43■■□□□ 1.18
SOX2-OT-212ENST00000491282 EIF4G1Q04637 1599 aaKnown RBP22.18■■□□□ 1.14
SOX2-OT-212ENST00000491282 CC2D2AQ9P2K1 1620 aa22.14■■□□□ 1.14
SOX2-OT-212ENST00000491282 CECR2Q9BXF3 1484 aa22.07■■□□□ 1.12
SOX2-OT-212ENST00000491282 SENP3Q9H4L4 574 aaPredicted RBP21.76■■□□□ 1.07
SOX2-OT-212ENST00000491282 SMARCA4P51532 1647 aa21.66■■□□□ 1.06
SOX2-OT-212ENST00000491282 ATAD2BQ9ULI0 1458 aa21.64■■□□□ 1.05
SOX2-OT-212ENST00000491282 NCAPD3P42695 1498 aa21.63■■□□□ 1.05
SOX2-OT-212ENST00000491282 BAZ1AQ9NRL2 1556 aaPredicted RBP21.61■■□□□ 1.05
SOX2-OT-212ENST00000491282 MROH2BQ7Z745 1585 aa21.54■■□□□ 1.04
SOX2-OT-212ENST00000491282 SMARCA2P51531 1590 aa21.53■■□□□ 1.04
SOX2-OT-212ENST00000491282 HMGXB3Q12766 1538 aa21.45■■□□□ 1.02
SOX2-OT-212ENST00000491282 BAZ1BQ9UIG0 1483 aaKnown RBP21.44■■□□□ 1.02
SOX2-OT-212ENST00000491282 PEG3Q9GZU2 1588 aa21.41■■□□□ 1.02
SOX2-OT-212ENST00000491282 WIZO95785 1651 aa21.27■■□□□ 1
SOX2-OT-212ENST00000491282 RSF1Q96T23 1441 aaPredicted RBP21.26■□□□□ 0.99
SOX2-OT-212ENST00000491282 NESP48681 1621 aa21.21■□□□□ 0.99
SOX2-OT-212ENST00000491282 ERCC6Q03468 1493 aa21.15■□□□□ 0.98
SOX2-OT-212ENST00000491282 PLPPR3Q6T4P5 718 aa21.1■□□□□ 0.97
SOX2-OT-212ENST00000491282 LAMC3Q9Y6N6 1575 aa21.02■□□□□ 0.96
SOX2-OT-212ENST00000491282 CADPSQ9ULU8 1353 aa21.02■□□□□ 0.96
SOX2-OT-212ENST00000491282 TOP2AP11388 1531 aaKnown RBP21.02■□□□□ 0.96
SOX2-OT-212ENST00000491282 PDS5BQ9NTI5 1447 aa20.95■□□□□ 0.95
SOX2-OT-212ENST00000491282 CUX2O14529 1486 aa20.92■□□□□ 0.94
SOX2-OT-212ENST00000491282 KIF21AQ7Z4S6 1674 aa20.84■□□□□ 0.93
SOX2-OT-212ENST00000491282 CCDC88BA6NC98 1476 aa20.83■□□□□ 0.93
SOX2-OT-212ENST00000491282 CFTRP13569 1480 aa20.83■□□□□ 0.93
SOX2-OT-212ENST00000491282 THOC2Q8NI27 1593 aaKnown RBP20.81■□□□□ 0.92
SOX2-OT-212ENST00000491282 FANCD2Q9BXW9 1451 aa20.77■□□□□ 0.92
SOX2-OT-212ENST00000491282 MRC2Q9UBG0 1479 aa20.74■□□□□ 0.91
SOX2-OT-212ENST00000491282 CEP164Q9UPV0 1460 aa20.73■□□□□ 0.91
SOX2-OT-212ENST00000491282 SUPT5HO00267 1087 aaKnown RBP20.72■□□□□ 0.91
SOX2-OT-212ENST00000491282 WDR62O43379 1518 aa20.64■□□□□ 0.9
SOX2-OT-212ENST00000491282 URB2Q14146 1524 aaKnown RBP20.58■□□□□ 0.88
SOX2-OT-212ENST00000491282 DNAJC5Q9H3Z4 198 aa20.57■□□□□ 0.88
SOX2-OT-212ENST00000491282 PRDM2Q13029 1718 aa20.5■□□□□ 0.87
SOX2-OT-212ENST00000491282 TOPBP1Q92547 1522 aa20.41■□□□□ 0.86
SOX2-OT-212ENST00000491282 ABCC8Q09428 1581 aa20.36■□□□□ 0.85
SOX2-OT-212ENST00000491282 DNMBPQ6XZF7 1577 aa20.34■□□□□ 0.85
SOX2-OT-212ENST00000491282 IFT140Q96RY7 1462 aa20.3■□□□□ 0.84
SOX2-OT-212ENST00000491282 ZNF608Q9ULD9 1512 aaPredicted RBP20.28■□□□□ 0.84
SOX2-OT-212ENST00000491282 POLA1P09884 1462 aaPredicted RBP20.23■□□□□ 0.83
SOX2-OT-212ENST00000491282 RAD54L2Q9Y4B4 1467 aa20.2■□□□□ 0.82
SOX2-OT-212ENST00000491282 CUX1P39880 1505 aa20.2■□□□□ 0.82
SOX2-OT-212ENST00000491282 SOGA1O94964 1423 aa20.19■□□□□ 0.82
SOX2-OT-212ENST00000491282 AQRO60306 1485 aaKnown RBP eCLIP20.18■□□□□ 0.82
SOX2-OT-212ENST00000491282 FGD5Q6ZNL6 1462 aa20.18■□□□□ 0.82
SOX2-OT-212ENST00000491282 FOXD1Q16676 465 aa20.16■□□□□ 0.82
SOX2-OT-212ENST00000491282 TARBP1Q13395 1621 aaKnown RBP20.16■□□□□ 0.82
SOX2-OT-212ENST00000491282 OSCARQ8IYS5 282 aa20.14■□□□□ 0.81
SOX2-OT-212ENST00000491282 TDRD9Q8NDG6 1382 aaKnown RBP20.13■□□□□ 0.81
SOX2-OT-212ENST00000491282 EIF4G3O43432 1585 aaKnown RBP20.11■□□□□ 0.81
SOX2-OT-212ENST00000491282 WRNQ14191 1432 aaPredicted RBP eCLIP20.03■□□□□ 0.8
SOX2-OT-212ENST00000491282 FBLN2P98095 1184 aa20.02■□□□□ 0.8
SOX2-OT-212ENST00000491282 SYNJ1O43426 1573 aa19.97■□□□□ 0.79
SOX2-OT-212ENST00000491282 TOP2BQ02880 1626 aa19.94■□□□□ 0.78
SOX2-OT-212ENST00000491282 SNAPC4Q5SXM2 1469 aa19.93■□□□□ 0.78
SOX2-OT-212ENST00000491282 ABCA10Q8WWZ4 1543 aa19.93■□□□□ 0.78
SOX2-OT-212ENST00000491282 GRIN2BQ13224 1484 aa19.92■□□□□ 0.78
SOX2-OT-212ENST00000491282 GAPVD1Q14C86 1478 aa19.92■□□□□ 0.78
SOX2-OT-212ENST00000491282 WDR97A6NE52 1622 aa19.91■□□□□ 0.78
SOX2-OT-212ENST00000491282 BIVM-ERCC5R4GMW8 1640 aa19.91■□□□□ 0.78
SOX2-OT-212ENST00000491282 CHMP7Q8WUX9 453 aaPredicted RBP19.9■□□□□ 0.78
SOX2-OT-212ENST00000491282 TRIM41Q8WV44 630 aa19.9■□□□□ 0.78
SOX2-OT-212ENST00000491282 CHD1O14646 1710 aa19.86■□□□□ 0.77
SOX2-OT-212ENST00000491282 MAGI1Q96QZ7 1491 aaPredicted RBP19.86■□□□□ 0.77
SOX2-OT-212ENST00000491282 ADRA2BP18089 450 aa19.85■□□□□ 0.77
SOX2-OT-212ENST00000491282 PPP6R1Q9UPN7 881 aa19.83■□□□□ 0.77
SOX2-OT-212ENST00000491282 ABCA5Q8WWZ7 1642 aa19.83■□□□□ 0.76
SOX2-OT-212ENST00000491282 SYNJ2O15056 1496 aa19.8■□□□□ 0.76
SOX2-OT-212ENST00000491282 PBRM1Q86U86 1689 aa19.78■□□□□ 0.76
SOX2-OT-212ENST00000491282 RIMBP3CA6NJZ7 1639 aa19.74■□□□□ 0.75
SOX2-OT-212ENST00000491282 RIMBP3BA6NNM3 1639 aa19.74■□□□□ 0.75
SOX2-OT-212ENST00000491282 RIMBP3Q9UFD9 1639 aa19.74■□□□□ 0.75
SOX2-OT-212ENST00000491282 ARHGEF11O15085 1522 aa19.74■□□□□ 0.75
SOX2-OT-212ENST00000491282 CLASP1Q7Z460 1538 aa19.68■□□□□ 0.74
SOX2-OT-212ENST00000491282 CYB5RLQ6IPT4 315 aa19.68■□□□□ 0.74
SOX2-OT-212ENST00000491282 FHAD1B1AJZ9 1412 aa19.68■□□□□ 0.74
SOX2-OT-212ENST00000491282 GRIN2AQ12879 1464 aa19.67■□□□□ 0.74
SOX2-OT-212ENST00000491282 ERICH3Q5RHP9 1530 aa19.66■□□□□ 0.74
SOX2-OT-212ENST00000491282 ADAMTS12P58397 1594 aa19.66■□□□□ 0.74
SOX2-OT-212ENST00000491282 KIF27Q86VH2 1401 aa19.63■□□□□ 0.73
SOX2-OT-212ENST00000491282 IGF1RP08069 1367 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms