RNA–Protein interactions for RNA: ENST00000491257.1

SLC22A4-203, Transcript of solute carrier family 22 member 4, humanhuman

TSL 4

Gene SLC22A4, Length 564 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC22A4-203ENST00000491257 NISCHQ9Y2I1 1504 aa27.37■■□□□ 1.97
SLC22A4-203ENST00000491257 CCDC180Q9P1Z9 1646 aa24.47■■□□□ 1.51
SLC22A4-203ENST00000491257 ABCC9O60706 1549 aa24.03■■□□□ 1.44
SLC22A4-203ENST00000491257 RB1CC1Q8TDY2 1594 aa23.07■■□□□ 1.28
SLC22A4-203ENST00000491257 NACADO15069 1562 aa23■■□□□ 1.27
SLC22A4-203ENST00000491257 DCAF8L2P0C7V8 631 aa22.9■■□□□ 1.26
SLC22A4-203ENST00000491257 MYO15BQ96JP2 1530 aa22.81■■□□□ 1.24
SLC22A4-203ENST00000491257 ZCCHC6Q5VYS8 1495 aaKnown RBP22.77■■□□□ 1.24
SLC22A4-203ENST00000491257 DCAF1Q9Y4B6 1507 aa22.65■■□□□ 1.22
SLC22A4-203ENST00000491257 UNC13AQ9UPW8 1703 aa22.62■■□□□ 1.21
SLC22A4-203ENST00000491257 PABPN1Q86U42 306 aaKnown RBP eCLIP22.39■■□□□ 1.17
SLC22A4-203ENST00000491257 BICRAQ9NZM4 1560 aa22.38■■□□□ 1.17
SLC22A4-203ENST00000491257 SCRIBQ14160 1630 aa22.28■■□□□ 1.16
SLC22A4-203ENST00000491257 DNAJC5BQ9UF47 199 aa22.17■■□□□ 1.14
SLC22A4-203ENST00000491257 SHROOM4Q9ULL8 1493 aa22.13■■□□□ 1.13
SLC22A4-203ENST00000491257 EIF4G1Q04637 1599 aaKnown RBP21.8■■□□□ 1.08
SLC22A4-203ENST00000491257 CC2D2AQ9P2K1 1620 aa21.76■■□□□ 1.07
SLC22A4-203ENST00000491257 CECR2Q9BXF3 1484 aa21.61■■□□□ 1.05
SLC22A4-203ENST00000491257 SMARCA4P51532 1647 aa21.3■■□□□ 1
SLC22A4-203ENST00000491257 BAZ1AQ9NRL2 1556 aaPredicted RBP21.24■□□□□ 0.99
SLC22A4-203ENST00000491257 NCAPD3P42695 1498 aa21.2■□□□□ 0.98
SLC22A4-203ENST00000491257 ATAD2BQ9ULI0 1458 aa21.19■□□□□ 0.98
SLC22A4-203ENST00000491257 SMARCA2P51531 1590 aa21.19■□□□□ 0.98
SLC22A4-203ENST00000491257 HMGXB3Q12766 1538 aa21.11■□□□□ 0.97
SLC22A4-203ENST00000491257 MROH2BQ7Z745 1585 aa21.09■□□□□ 0.97
SLC22A4-203ENST00000491257 PEG3Q9GZU2 1588 aa21.09■□□□□ 0.97
SLC22A4-203ENST00000491257 BAZ1BQ9UIG0 1483 aaKnown RBP21.02■□□□□ 0.96
SLC22A4-203ENST00000491257 WIZO95785 1651 aa20.89■□□□□ 0.93
SLC22A4-203ENST00000491257 RSF1Q96T23 1441 aaPredicted RBP20.78■□□□□ 0.92
SLC22A4-203ENST00000491257 NESP48681 1621 aa20.75■□□□□ 0.91
SLC22A4-203ENST00000491257 ERCC6Q03468 1493 aa20.73■□□□□ 0.91
SLC22A4-203ENST00000491257 LAMC3Q9Y6N6 1575 aa20.71■□□□□ 0.91
SLC22A4-203ENST00000491257 TOP2AP11388 1531 aaKnown RBP20.63■□□□□ 0.89
SLC22A4-203ENST00000491257 CUX2O14529 1486 aa20.57■□□□□ 0.88
SLC22A4-203ENST00000491257 CADPSQ9ULU8 1353 aa20.57■□□□□ 0.88
SLC22A4-203ENST00000491257 KIF21AQ7Z4S6 1674 aa20.56■□□□□ 0.88
SLC22A4-203ENST00000491257 PDS5BQ9NTI5 1447 aa20.53■□□□□ 0.88
SLC22A4-203ENST00000491257 THOC2Q8NI27 1593 aaKnown RBP20.51■□□□□ 0.87
SLC22A4-203ENST00000491257 CFTRP13569 1480 aa20.43■□□□□ 0.86
SLC22A4-203ENST00000491257 CCDC88BA6NC98 1476 aa20.37■□□□□ 0.85
SLC22A4-203ENST00000491257 PRDM2Q13029 1718 aa20.36■□□□□ 0.85
SLC22A4-203ENST00000491257 MRC2Q9UBG0 1479 aa20.35■□□□□ 0.85
SLC22A4-203ENST00000491257 CEP164Q9UPV0 1460 aa20.35■□□□□ 0.85
SLC22A4-203ENST00000491257 FANCD2Q9BXW9 1451 aa20.34■□□□□ 0.85
SLC22A4-203ENST00000491257 WDR62O43379 1518 aa20.3■□□□□ 0.84
SLC22A4-203ENST00000491257 URB2Q14146 1524 aaKnown RBP20.15■□□□□ 0.82
SLC22A4-203ENST00000491257 DNAJC5Q9H3Z4 198 aa20.11■□□□□ 0.81
SLC22A4-203ENST00000491257 SUPT5HO00267 1087 aaKnown RBP20.1■□□□□ 0.81
SLC22A4-203ENST00000491257 TOPBP1Q92547 1522 aa20.01■□□□□ 0.79
SLC22A4-203ENST00000491257 ABCC8Q09428 1581 aa20■□□□□ 0.79
SLC22A4-203ENST00000491257 DNMBPQ6XZF7 1577 aa19.99■□□□□ 0.79
SLC22A4-203ENST00000491257 IFT140Q96RY7 1462 aa19.91■□□□□ 0.78
SLC22A4-203ENST00000491257 ZNF608Q9ULD9 1512 aaPredicted RBP19.84■□□□□ 0.77
SLC22A4-203ENST00000491257 TARBP1Q13395 1621 aaKnown RBP19.83■□□□□ 0.76
SLC22A4-203ENST00000491257 POLA1P09884 1462 aaPredicted RBP19.82■□□□□ 0.76
SLC22A4-203ENST00000491257 CUX1P39880 1505 aa19.81■□□□□ 0.76
SLC22A4-203ENST00000491257 EIF4G3O43432 1585 aaKnown RBP19.79■□□□□ 0.76
SLC22A4-203ENST00000491257 FGD5Q6ZNL6 1462 aa19.75■□□□□ 0.75
SLC22A4-203ENST00000491257 RAD54L2Q9Y4B4 1467 aa19.73■□□□□ 0.75
SLC22A4-203ENST00000491257 SOGA1O94964 1423 aa19.72■□□□□ 0.75
SLC22A4-203ENST00000491257 AQRO60306 1485 aaKnown RBP eCLIP19.69■□□□□ 0.749e-8■■■■□ 22.1
SLC22A4-203ENST00000491257 OSCARQ8IYS5 282 aa19.67■□□□□ 0.74
SLC22A4-203ENST00000491257 WDR97A6NE52 1622 aa19.66■□□□□ 0.74
SLC22A4-203ENST00000491257 TDRD9Q8NDG6 1382 aaKnown RBP19.63■□□□□ 0.73
SLC22A4-203ENST00000491257 BIVM-ERCC5R4GMW8 1640 aa19.62■□□□□ 0.73
SLC22A4-203ENST00000491257 TOP2BQ02880 1626 aa19.61■□□□□ 0.73
SLC22A4-203ENST00000491257 WRNQ14191 1432 aaPredicted RBP eCLIP19.6■□□□□ 0.73
SLC22A4-203ENST00000491257 CHD1O14646 1710 aa19.6■□□□□ 0.73
SLC22A4-203ENST00000491257 SYNJ1O43426 1573 aa19.58■□□□□ 0.73
SLC22A4-203ENST00000491257 ABCA10Q8WWZ4 1543 aa19.56■□□□□ 0.72
SLC22A4-203ENST00000491257 PBRM1Q86U86 1689 aa19.54■□□□□ 0.72
SLC22A4-203ENST00000491257 GRIN2BQ13224 1484 aa19.53■□□□□ 0.72
SLC22A4-203ENST00000491257 SNAPC4Q5SXM2 1469 aa19.52■□□□□ 0.72
SLC22A4-203ENST00000491257 ABCA5Q8WWZ7 1642 aa19.51■□□□□ 0.71
SLC22A4-203ENST00000491257 GAPVD1Q14C86 1478 aa19.51■□□□□ 0.71
SLC22A4-203ENST00000491257 MAGI1Q96QZ7 1491 aaPredicted RBP19.5■□□□□ 0.71
SLC22A4-203ENST00000491257 FBLN2P98095 1184 aa19.48■□□□□ 0.71
SLC22A4-203ENST00000491257 SYNJ2O15056 1496 aa19.42■□□□□ 0.7
SLC22A4-203ENST00000491257 RIMBP3CA6NJZ7 1639 aa19.42■□□□□ 0.7
SLC22A4-203ENST00000491257 RIMBP3BA6NNM3 1639 aa19.42■□□□□ 0.7
SLC22A4-203ENST00000491257 RIMBP3Q9UFD9 1639 aa19.42■□□□□ 0.7
SLC22A4-203ENST00000491257 CHMP7Q8WUX9 453 aaPredicted RBP19.41■□□□□ 0.7
SLC22A4-203ENST00000491257 ARHGEF11O15085 1522 aa19.38■□□□□ 0.69
SLC22A4-203ENST00000491257 TRIM41Q8WV44 630 aa19.37■□□□□ 0.69
SLC22A4-203ENST00000491257 ADAMTS12P58397 1594 aa19.34■□□□□ 0.69
SLC22A4-203ENST00000491257 CLASP1Q7Z460 1538 aa19.34■□□□□ 0.69
SLC22A4-203ENST00000491257 ERICH3Q5RHP9 1530 aa19.33■□□□□ 0.68
SLC22A4-203ENST00000491257 GRIN2AQ12879 1464 aa19.28■□□□□ 0.68
SLC22A4-203ENST00000491257 FHAD1B1AJZ9 1412 aa19.26■□□□□ 0.67
SLC22A4-203ENST00000491257 CEP170Q5SW79 1584 aa19.2■□□□□ 0.66
SLC22A4-203ENST00000491257 KIF27Q86VH2 1401 aa19.2■□□□□ 0.66
SLC22A4-203ENST00000491257 ARAP1Q96P48 1450 aa19.2■□□□□ 0.66
SLC22A4-203ENST00000491257 NUP160Q12769 1436 aa19.19■□□□□ 0.66
SLC22A4-203ENST00000491257 CYB5RLQ6IPT4 315 aa19.17■□□□□ 0.66
SLC22A4-203ENST00000491257 CUL7Q14999 1698 aa19.15■□□□□ 0.66
SLC22A4-203ENST00000491257 IGF1RP08069 1367 aa19.12■□□□□ 0.65
SLC22A4-203ENST00000491257 SHROOM2Q13796 1616 aa19.11■□□□□ 0.65
SLC22A4-203ENST00000491257 RUSC2Q8N2Y8 1516 aa19.06■□□□□ 0.64
SLC22A4-203ENST00000491257 ERCC6L2Q5T890 1561 aa19.06■□□□□ 0.64
SLC22A4-203ENST00000491257 CARMIL1Q5VZK9 1371 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms