RNA–Protein interactions for RNA: ENST00000491251.1

MTMR3-210, Transcript of myotubularin related protein 3, humanhuman

TSL 2

Gene MTMR3, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTMR3-210ENST00000491251 NISCHQ9Y2I1 1504 aa27.84■■■□□ 2.05
MTMR3-210ENST00000491251 CCDC180Q9P1Z9 1646 aa25.11■■□□□ 1.61
MTMR3-210ENST00000491251 ABCC9O60706 1549 aa24.79■■□□□ 1.56
MTMR3-210ENST00000491251 RB1CC1Q8TDY2 1594 aa23.82■■□□□ 1.4
MTMR3-210ENST00000491251 NACADO15069 1562 aa23.69■■□□□ 1.38
MTMR3-210ENST00000491251 MYO15BQ96JP2 1530 aa23.48■■□□□ 1.35
MTMR3-210ENST00000491251 UNC13AQ9UPW8 1703 aa23.23■■□□□ 1.31
MTMR3-210ENST00000491251 DCAF8L2P0C7V8 631 aa23.23■■□□□ 1.31
MTMR3-210ENST00000491251 DCAF1Q9Y4B6 1507 aa23.14■■□□□ 1.3
MTMR3-210ENST00000491251 DNAJC5BQ9UF47 199 aa23.13■■□□□ 1.29
MTMR3-210ENST00000491251 ZCCHC6Q5VYS8 1495 aaKnown RBP23.09■■□□□ 1.29
MTMR3-210ENST00000491251 BICRAQ9NZM4 1560 aa23.03■■□□□ 1.28
MTMR3-210ENST00000491251 PABPN1Q86U42 306 aaKnown RBP eCLIP22.99■■□□□ 1.27
MTMR3-210ENST00000491251 SHROOM4Q9ULL8 1493 aa22.97■■□□□ 1.27
MTMR3-210ENST00000491251 SCRIBQ14160 1630 aa22.65■■□□□ 1.22
MTMR3-210ENST00000491251 CC2D2AQ9P2K1 1620 aa22.49■■□□□ 1.19
MTMR3-210ENST00000491251 EIF4G1Q04637 1599 aaKnown RBP22.49■■□□□ 1.19
MTMR3-210ENST00000491251 CECR2Q9BXF3 1484 aa22.41■■□□□ 1.18
MTMR3-210ENST00000491251 NCAPD3P42695 1498 aa21.83■■□□□ 1.08
MTMR3-210ENST00000491251 SMARCA2P51531 1590 aa21.74■■□□□ 1.07
MTMR3-210ENST00000491251 SMARCA4P51532 1647 aa21.72■■□□□ 1.07
MTMR3-210ENST00000491251 HMGXB3Q12766 1538 aa21.71■■□□□ 1.07
MTMR3-210ENST00000491251 ATAD2BQ9ULI0 1458 aa21.7■■□□□ 1.06
MTMR3-210ENST00000491251 BAZ1AQ9NRL2 1556 aaPredicted RBP21.66■■□□□ 1.06
MTMR3-210ENST00000491251 PEG3Q9GZU2 1588 aa21.61■■□□□ 1.05
MTMR3-210ENST00000491251 CUX2O14529 1486 aa21.55■■□□□ 1.04
MTMR3-210ENST00000491251 BAZ1BQ9UIG0 1483 aaKnown RBP21.5■■□□□ 1.03
MTMR3-210ENST00000491251 ERCC6Q03468 1493 aa21.48■■□□□ 1.03
MTMR3-210ENST00000491251 LAMC3Q9Y6N6 1575 aa21.37■■□□□ 1.01
MTMR3-210ENST00000491251 DNAJC5Q9H3Z4 198 aa21.37■■□□□ 1.01
MTMR3-210ENST00000491251 MROH2BQ7Z745 1585 aa21.36■■□□□ 1.01
MTMR3-210ENST00000491251 NESP48681 1621 aa21.29■■□□□ 1
MTMR3-210ENST00000491251 THOC2Q8NI27 1593 aaKnown RBP21.21■□□□□ 0.99
MTMR3-210ENST00000491251 PDS5BQ9NTI5 1447 aa21.2■□□□□ 0.98
MTMR3-210ENST00000491251 KIF21AQ7Z4S6 1674 aa21.13■□□□□ 0.97
MTMR3-210ENST00000491251 WIZO95785 1651 aa21.12■□□□□ 0.97
MTMR3-210ENST00000491251 CADPSQ9ULU8 1353 aa21.11■□□□□ 0.97
MTMR3-210ENST00000491251 MRC2Q9UBG0 1479 aa20.98■□□□□ 0.95
MTMR3-210ENST00000491251 WDR62O43379 1518 aa20.96■□□□□ 0.95
MTMR3-210ENST00000491251 RSF1Q96T23 1441 aaPredicted RBP20.95■□□□□ 0.95
MTMR3-210ENST00000491251 TOP2AP11388 1531 aaKnown RBP20.94■□□□□ 0.94
MTMR3-210ENST00000491251 CFTRP13569 1480 aa20.91■□□□□ 0.94
MTMR3-210ENST00000491251 CEP164Q9UPV0 1460 aa20.9■□□□□ 0.94
MTMR3-210ENST00000491251 FANCD2Q9BXW9 1451 aa20.85■□□□□ 0.93
MTMR3-210ENST00000491251 PRDM2Q13029 1718 aa20.82■□□□□ 0.92
MTMR3-210ENST00000491251 URB2Q14146 1524 aaKnown RBP20.64■□□□□ 0.9
MTMR3-210ENST00000491251 CCDC88BA6NC98 1476 aa20.62■□□□□ 0.89
MTMR3-210ENST00000491251 ABCC8Q09428 1581 aa20.57■□□□□ 0.88
MTMR3-210ENST00000491251 IFT140Q96RY7 1462 aa20.51■□□□□ 0.87
MTMR3-210ENST00000491251 OSCARQ8IYS5 282 aa20.47■□□□□ 0.87
MTMR3-210ENST00000491251 TOPBP1Q92547 1522 aa20.47■□□□□ 0.87
MTMR3-210ENST00000491251 DNMBPQ6XZF7 1577 aa20.45■□□□□ 0.86
MTMR3-210ENST00000491251 ZNF608Q9ULD9 1512 aaPredicted RBP20.33■□□□□ 0.85
MTMR3-210ENST00000491251 EIF4G3O43432 1585 aaKnown RBP20.33■□□□□ 0.84
MTMR3-210ENST00000491251 TARBP1Q13395 1621 aaKnown RBP20.31■□□□□ 0.84
MTMR3-210ENST00000491251 WDR97A6NE52 1622 aa20.28■□□□□ 0.84
MTMR3-210ENST00000491251 TRIM41Q8WV44 630 aa20.28■□□□□ 0.84
MTMR3-210ENST00000491251 POLA1P09884 1462 aaPredicted RBP20.25■□□□□ 0.83
MTMR3-210ENST00000491251 RIMBP3CA6NJZ7 1639 aa20.2■□□□□ 0.82
MTMR3-210ENST00000491251 RIMBP3BA6NNM3 1639 aa20.2■□□□□ 0.82
MTMR3-210ENST00000491251 RIMBP3Q9UFD9 1639 aa20.2■□□□□ 0.82
MTMR3-210ENST00000491251 CHD1O14646 1710 aa20.16■□□□□ 0.82
MTMR3-210ENST00000491251 SOGA1O94964 1423 aa20.15■□□□□ 0.82
MTMR3-210ENST00000491251 AQRO60306 1485 aaKnown RBP eCLIP20.15■□□□□ 0.82
MTMR3-210ENST00000491251 ARHGEF11O15085 1522 aa20.14■□□□□ 0.81
MTMR3-210ENST00000491251 FGD5Q6ZNL6 1462 aa20.11■□□□□ 0.81
MTMR3-210ENST00000491251 CUX1P39880 1505 aa20.08■□□□□ 0.81
MTMR3-210ENST00000491251 RAD54L2Q9Y4B4 1467 aa20.08■□□□□ 0.81
MTMR3-210ENST00000491251 MAGI1Q96QZ7 1491 aaPredicted RBP20.06■□□□□ 0.8
MTMR3-210ENST00000491251 TDRD9Q8NDG6 1382 aaKnown RBP20.02■□□□□ 0.8
MTMR3-210ENST00000491251 GRIN2BQ13224 1484 aa20.02■□□□□ 0.8
MTMR3-210ENST00000491251 SNAPC4Q5SXM2 1469 aa19.99■□□□□ 0.79
MTMR3-210ENST00000491251 SYNJ1O43426 1573 aa19.99■□□□□ 0.79
MTMR3-210ENST00000491251 ABCA10Q8WWZ4 1543 aa19.97■□□□□ 0.79
MTMR3-210ENST00000491251 FBLN2P98095 1184 aa19.96■□□□□ 0.79
MTMR3-210ENST00000491251 SYNJ2O15056 1496 aa19.96■□□□□ 0.79
MTMR3-210ENST00000491251 PBRM1Q86U86 1689 aa19.96■□□□□ 0.79
MTMR3-210ENST00000491251 CLASP1Q7Z460 1538 aa19.96■□□□□ 0.79
MTMR3-210ENST00000491251 GAPVD1Q14C86 1478 aa19.93■□□□□ 0.78
MTMR3-210ENST00000491251 ABCA5Q8WWZ7 1642 aa19.93■□□□□ 0.78
MTMR3-210ENST00000491251 CHMP7Q8WUX9 453 aaPredicted RBP19.91■□□□□ 0.78
MTMR3-210ENST00000491251 ARAP1Q96P48 1450 aa19.91■□□□□ 0.78
MTMR3-210ENST00000491251 BIVM-ERCC5R4GMW8 1640 aa19.88■□□□□ 0.77
MTMR3-210ENST00000491251 SUPT5HO00267 1087 aaKnown RBP19.88■□□□□ 0.77
MTMR3-210ENST00000491251 CYB5RLQ6IPT4 315 aa19.88■□□□□ 0.77
MTMR3-210ENST00000491251 WRNQ14191 1432 aaPredicted RBP eCLIP19.87■□□□□ 0.77
MTMR3-210ENST00000491251 TOP2BQ02880 1626 aa19.87■□□□□ 0.77
MTMR3-210ENST00000491251 ADAMTS12P58397 1594 aa19.75■□□□□ 0.75
MTMR3-210ENST00000491251 GRIN2AQ12879 1464 aa19.75■□□□□ 0.75
MTMR3-210ENST00000491251 ERICH3Q5RHP9 1530 aa19.75■□□□□ 0.75
MTMR3-210ENST00000491251 FHAD1B1AJZ9 1412 aa19.7■□□□□ 0.74
MTMR3-210ENST00000491251 NUP160Q12769 1436 aa19.7■□□□□ 0.74
MTMR3-210ENST00000491251 SHROOM2Q13796 1616 aa19.65■□□□□ 0.74
MTMR3-210ENST00000491251 TRHP20396 242 aaPredicted RBP19.64■□□□□ 0.73
MTMR3-210ENST00000491251 CEP170Q5SW79 1584 aa19.64■□□□□ 0.73
MTMR3-210ENST00000491251 ERCC6L2Q5T890 1561 aa19.51■□□□□ 0.71
MTMR3-210ENST00000491251 CUL7Q14999 1698 aa19.49■□□□□ 0.71
MTMR3-210ENST00000491251 RUSC2Q8N2Y8 1516 aa19.48■□□□□ 0.71
MTMR3-210ENST00000491251 KIF27Q86VH2 1401 aa19.46■□□□□ 0.71
MTMR3-210ENST00000491251 PRG4Q92954 1404 aaPredicted RBP19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 166 ms