RNA–Protein interactions for RNA: ENST00000491193.1

NR1I3-215, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 2

Gene NR1I3, Length 1,435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-215ENST00000491193 NISCHQ9Y2I1 1504 aa35.5■■■■□ 3.27
NR1I3-215ENST00000491193 CCDC180Q9P1Z9 1646 aa31.58■■■□□ 2.65
NR1I3-215ENST00000491193 ABCC9O60706 1549 aa31.29■■■□□ 2.6
NR1I3-215ENST00000491193 DCAF8L2P0C7V8 631 aa29.95■■■□□ 2.38
NR1I3-215ENST00000491193 RB1CC1Q8TDY2 1594 aa29.91■■■□□ 2.38
NR1I3-215ENST00000491193 NACADO15069 1562 aa29.8■■■□□ 2.36
NR1I3-215ENST00000491193 MYO15BQ96JP2 1530 aa29.5■■■□□ 2.31
NR1I3-215ENST00000491193 ZCCHC6Q5VYS8 1495 aaKnown RBP29.48■■■□□ 2.31
NR1I3-215ENST00000491193 DCAF1Q9Y4B6 1507 aa29.29■■■□□ 2.28
NR1I3-215ENST00000491193 PABPN1Q86U42 306 aaKnown RBP eCLIP29.27■■■□□ 2.28
NR1I3-215ENST00000491193 UNC13AQ9UPW8 1703 aa29.2■■■□□ 2.26
NR1I3-215ENST00000491193 BICRAQ9NZM4 1560 aa29.02■■■□□ 2.24
NR1I3-215ENST00000491193 DNAJC5BQ9UF47 199 aa29.01■■■□□ 2.23
NR1I3-215ENST00000491193 SCRIBQ14160 1630 aa28.9■■■□□ 2.22
NR1I3-215ENST00000491193 SHROOM4Q9ULL8 1493 aa28.61■■■□□ 2.17
NR1I3-215ENST00000491193 EIF4G1Q04637 1599 aaKnown RBP28.28■■■□□ 2.12
NR1I3-215ENST00000491193 CC2D2AQ9P2K1 1620 aa28.24■■■□□ 2.11
NR1I3-215ENST00000491193 CECR2Q9BXF3 1484 aa28.12■■■□□ 2.09
NR1I3-215ENST00000491193 SMARCA4P51532 1647 aa27.58■■■□□ 2
NR1I3-215ENST00000491193 NCAPD3P42695 1498 aa27.53■■■□□ 2
NR1I3-215ENST00000491193 ATAD2BQ9ULI0 1458 aa27.53■■■□□ 2
NR1I3-215ENST00000491193 BAZ1AQ9NRL2 1556 aaPredicted RBP27.51■■□□□ 1.99
NR1I3-215ENST00000491193 SMARCA2P51531 1590 aa27.44■■□□□ 1.98
NR1I3-215ENST00000491193 MROH2BQ7Z745 1585 aa27.37■■□□□ 1.97
NR1I3-215ENST00000491193 HMGXB3Q12766 1538 aa27.33■■□□□ 1.97
NR1I3-215ENST00000491193 BAZ1BQ9UIG0 1483 aaKnown RBP27.29■■□□□ 1.96
NR1I3-215ENST00000491193 PEG3Q9GZU2 1588 aa27.28■■□□□ 1.96
NR1I3-215ENST00000491193 WIZO95785 1651 aa27.07■■□□□ 1.92
NR1I3-215ENST00000491193 NESP48681 1621 aa27■■□□□ 1.91
NR1I3-215ENST00000491193 RSF1Q96T23 1441 aaPredicted RBP26.98■■□□□ 1.91
NR1I3-215ENST00000491193 ERCC6Q03468 1493 aa26.98■■□□□ 1.91
NR1I3-215ENST00000491193 LAMC3Q9Y6N6 1575 aa26.82■■□□□ 1.88
NR1I3-215ENST00000491193 CADPSQ9ULU8 1353 aa26.75■■□□□ 1.87
NR1I3-215ENST00000491193 CUX2O14529 1486 aa26.72■■□□□ 1.87
NR1I3-215ENST00000491193 TOP2AP11388 1531 aaKnown RBP26.71■■□□□ 1.87
NR1I3-215ENST00000491193 PDS5BQ9NTI5 1447 aa26.7■■□□□ 1.86
NR1I3-215ENST00000491193 KIF21AQ7Z4S6 1674 aa26.61■■□□□ 1.85
NR1I3-215ENST00000491193 THOC2Q8NI27 1593 aaKnown RBP26.56■■□□□ 1.84
NR1I3-215ENST00000491193 CFTRP13569 1480 aa26.51■■□□□ 1.83
NR1I3-215ENST00000491193 CCDC88BA6NC98 1476 aa26.47■■□□□ 1.83
NR1I3-215ENST00000491193 FANCD2Q9BXW9 1451 aa26.44■■□□□ 1.82
NR1I3-215ENST00000491193 MRC2Q9UBG0 1479 aa26.41■■□□□ 1.82
NR1I3-215ENST00000491193 CEP164Q9UPV0 1460 aa26.41■■□□□ 1.82
NR1I3-215ENST00000491193 WDR62O43379 1518 aa26.31■■□□□ 1.8
NR1I3-215ENST00000491193 DNAJC5Q9H3Z4 198 aa26.29■■□□□ 1.8
NR1I3-215ENST00000491193 SUPT5HO00267 1087 aaKnown RBP26.22■■□□□ 1.79
NR1I3-215ENST00000491193 PRDM2Q13029 1718 aa26.19■■□□□ 1.78
NR1I3-215ENST00000491193 URB2Q14146 1524 aaKnown RBP26.17■■□□□ 1.78
NR1I3-215ENST00000491193 TOPBP1Q92547 1522 aa25.97■■□□□ 1.75
NR1I3-215ENST00000491193 ABCC8Q09428 1581 aa25.92■■□□□ 1.74
NR1I3-215ENST00000491193 DNMBPQ6XZF7 1577 aa25.89■■□□□ 1.73
NR1I3-215ENST00000491193 IFT140Q96RY7 1462 aa25.86■■□□□ 1.73
NR1I3-215ENST00000491193 ZNF608Q9ULD9 1512 aaPredicted RBP25.81■■□□□ 1.72
NR1I3-215ENST00000491193 POLA1P09884 1462 aaPredicted RBP25.74■■□□□ 1.71
NR1I3-215ENST00000491193 CUX1P39880 1505 aa25.68■■□□□ 1.7
NR1I3-215ENST00000491193 TARBP1Q13395 1621 aaKnown RBP25.68■■□□□ 1.7
NR1I3-215ENST00000491193 SOGA1O94964 1423 aa25.67■■□□□ 1.7
NR1I3-215ENST00000491193 OSCARQ8IYS5 282 aa25.67■■□□□ 1.7
NR1I3-215ENST00000491193 RAD54L2Q9Y4B4 1467 aa25.67■■□□□ 1.7
NR1I3-215ENST00000491193 AQRO60306 1485 aaKnown RBP eCLIP25.65■■□□□ 1.7
NR1I3-215ENST00000491193 FGD5Q6ZNL6 1462 aa25.65■■□□□ 1.7
NR1I3-215ENST00000491193 EIF4G3O43432 1585 aaKnown RBP25.63■■□□□ 1.69
NR1I3-215ENST00000491193 TDRD9Q8NDG6 1382 aaKnown RBP25.59■■□□□ 1.69
NR1I3-215ENST00000491193 FBLN2P98095 1184 aa25.47■■□□□ 1.67
NR1I3-215ENST00000491193 WRNQ14191 1432 aaPredicted RBP eCLIP25.44■■□□□ 1.66
NR1I3-215ENST00000491193 WDR97A6NE52 1622 aa25.4■■□□□ 1.66
NR1I3-215ENST00000491193 TRIM41Q8WV44 630 aa25.38■■□□□ 1.65
NR1I3-215ENST00000491193 SYNJ1O43426 1573 aa25.37■■□□□ 1.65
NR1I3-215ENST00000491193 SNAPC4Q5SXM2 1469 aa25.37■■□□□ 1.65
NR1I3-215ENST00000491193 TOP2BQ02880 1626 aa25.36■■□□□ 1.65
NR1I3-215ENST00000491193 GRIN2BQ13224 1484 aa25.36■■□□□ 1.65
NR1I3-215ENST00000491193 ABCA10Q8WWZ4 1543 aa25.36■■□□□ 1.65
NR1I3-215ENST00000491193 CHD1O14646 1710 aa25.36■■□□□ 1.65
NR1I3-215ENST00000491193 BIVM-ERCC5R4GMW8 1640 aa25.34■■□□□ 1.65
NR1I3-215ENST00000491193 GAPVD1Q14C86 1478 aa25.34■■□□□ 1.65
NR1I3-215ENST00000491193 CHMP7Q8WUX9 453 aaPredicted RBP25.32■■□□□ 1.64
NR1I3-215ENST00000491193 MAGI1Q96QZ7 1491 aaPredicted RBP25.29■■□□□ 1.64
NR1I3-215ENST00000491193 ABCA5Q8WWZ7 1642 aa25.25■■□□□ 1.63
NR1I3-215ENST00000491193 PBRM1Q86U86 1689 aa25.24■■□□□ 1.63
NR1I3-215ENST00000491193 SYNJ2O15056 1496 aa25.21■■□□□ 1.63
NR1I3-215ENST00000491193 RIMBP3CA6NJZ7 1639 aa25.21■■□□□ 1.63
NR1I3-215ENST00000491193 RIMBP3BA6NNM3 1639 aa25.21■■□□□ 1.63
NR1I3-215ENST00000491193 RIMBP3Q9UFD9 1639 aa25.21■■□□□ 1.63
NR1I3-215ENST00000491193 ARHGEF11O15085 1522 aa25.19■■□□□ 1.62
NR1I3-215ENST00000491193 CYB5RLQ6IPT4 315 aa25.08■■□□□ 1.61
NR1I3-215ENST00000491193 CLASP1Q7Z460 1538 aa25.07■■□□□ 1.6
NR1I3-215ENST00000491193 ERICH3Q5RHP9 1530 aa25.04■■□□□ 1.6
NR1I3-215ENST00000491193 ADAMTS12P58397 1594 aa25.03■■□□□ 1.6
NR1I3-215ENST00000491193 GRIN2AQ12879 1464 aa25.03■■□□□ 1.6
NR1I3-215ENST00000491193 FHAD1B1AJZ9 1412 aa25.03■■□□□ 1.6
NR1I3-215ENST00000491193 ARAP1Q96P48 1450 aa24.97■■□□□ 1.59
NR1I3-215ENST00000491193 KIF27Q86VH2 1401 aa24.93■■□□□ 1.58
NR1I3-215ENST00000491193 NUP160Q12769 1436 aa24.91■■□□□ 1.58
NR1I3-215ENST00000491193 CEP170Q5SW79 1584 aa24.91■■□□□ 1.58
NR1I3-215ENST00000491193 IGF1RP08069 1367 aa24.89■■□□□ 1.58
NR1I3-215ENST00000491193 ERCC6L2Q5T890 1561 aa24.77■■□□□ 1.56
NR1I3-215ENST00000491193 JPH4Q96JJ6 628 aa24.75■■□□□ 1.55
NR1I3-215ENST00000491193 CUL7Q14999 1698 aa24.74■■□□□ 1.55
NR1I3-215ENST00000491193 CARMIL1Q5VZK9 1371 aa24.73■■□□□ 1.55
NR1I3-215ENST00000491193 SHROOM2Q13796 1616 aa24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms