RNA–Protein interactions for RNA: ENST00000491188.1

ZNF239-204, Transcript of zinc finger protein 239, humanhuman

TSL 2

Gene ZNF239, Length 701 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF239-204ENST00000491188 NISCHQ9Y2I1 1504 aa35.37■■■■□ 3.25
ZNF239-204ENST00000491188 CCDC180Q9P1Z9 1646 aa31.65■■■□□ 2.66
ZNF239-204ENST00000491188 ABCC9O60706 1549 aa31.1■■■□□ 2.57
ZNF239-204ENST00000491188 RB1CC1Q8TDY2 1594 aa29.86■■■□□ 2.37
ZNF239-204ENST00000491188 NACADO15069 1562 aa29.77■■■□□ 2.36
ZNF239-204ENST00000491188 DCAF8L2P0C7V8 631 aa29.56■■■□□ 2.32
ZNF239-204ENST00000491188 MYO15BQ96JP2 1530 aa29.5■■■□□ 2.31
ZNF239-204ENST00000491188 ZCCHC6Q5VYS8 1495 aaKnown RBP29.41■■■□□ 2.3
ZNF239-204ENST00000491188 UNC13AQ9UPW8 1703 aa29.31■■■□□ 2.28
ZNF239-204ENST00000491188 DCAF1Q9Y4B6 1507 aa29.28■■■□□ 2.28
ZNF239-204ENST00000491188 BICRAQ9NZM4 1560 aa28.98■■■□□ 2.23
ZNF239-204ENST00000491188 PABPN1Q86U42 306 aaKnown RBP eCLIP28.97■■■□□ 2.23
ZNF239-204ENST00000491188 SCRIBQ14160 1630 aa28.78■■■□□ 2.2
ZNF239-204ENST00000491188 DNAJC5BQ9UF47 199 aa28.76■■■□□ 2.19
ZNF239-204ENST00000491188 SHROOM4Q9ULL8 1493 aa28.66■■■□□ 2.18
ZNF239-204ENST00000491188 EIF4G1Q04637 1599 aaKnown RBP28.22■■■□□ 2.11
ZNF239-204ENST00000491188 CC2D2AQ9P2K1 1620 aa28.18■■■□□ 2.1
ZNF239-204ENST00000491188 CECR2Q9BXF3 1484 aa27.98■■■□□ 2.07
ZNF239-204ENST00000491188 SMARCA4P51532 1647 aa27.53■■■□□ 2
ZNF239-204ENST00000491188 BAZ1AQ9NRL2 1556 aaPredicted RBP27.44■■□□□ 1.98
ZNF239-204ENST00000491188 NCAPD3P42695 1498 aa27.44■■□□□ 1.98
ZNF239-204ENST00000491188 ATAD2BQ9ULI0 1458 aa27.4■■□□□ 1.98
ZNF239-204ENST00000491188 SMARCA2P51531 1590 aa27.39■■□□□ 1.98
ZNF239-204ENST00000491188 HMGXB3Q12766 1538 aa27.31■■□□□ 1.96
ZNF239-204ENST00000491188 PEG3Q9GZU2 1588 aa27.28■■□□□ 1.96
ZNF239-204ENST00000491188 MROH2BQ7Z745 1585 aa27.24■■□□□ 1.95
ZNF239-204ENST00000491188 BAZ1BQ9UIG0 1483 aaKnown RBP27.17■■□□□ 1.94
ZNF239-204ENST00000491188 WIZO95785 1651 aa26.98■■□□□ 1.91
ZNF239-204ENST00000491188 NESP48681 1621 aa26.85■■□□□ 1.89
ZNF239-204ENST00000491188 ERCC6Q03468 1493 aa26.83■■□□□ 1.89
ZNF239-204ENST00000491188 RSF1Q96T23 1441 aaPredicted RBP26.82■■□□□ 1.88
ZNF239-204ENST00000491188 LAMC3Q9Y6N6 1575 aa26.8■■□□□ 1.88
ZNF239-204ENST00000491188 CUX2O14529 1486 aa26.68■■□□□ 1.86
ZNF239-204ENST00000491188 TOP2AP11388 1531 aaKnown RBP26.65■■□□□ 1.86
ZNF239-204ENST00000491188 KIF21AQ7Z4S6 1674 aa26.62■■□□□ 1.85
ZNF239-204ENST00000491188 CADPSQ9ULU8 1353 aa26.6■■□□□ 1.85
ZNF239-204ENST00000491188 PDS5BQ9NTI5 1447 aa26.57■■□□□ 1.84
ZNF239-204ENST00000491188 THOC2Q8NI27 1593 aaKnown RBP26.56■■□□□ 1.84
ZNF239-204ENST00000491188 CFTRP13569 1480 aa26.41■■□□□ 1.82
ZNF239-204ENST00000491188 PRDM2Q13029 1718 aa26.36■■□□□ 1.81
ZNF239-204ENST00000491188 MRC2Q9UBG0 1479 aa26.33■■□□□ 1.81
ZNF239-204ENST00000491188 FANCD2Q9BXW9 1451 aa26.31■■□□□ 1.8
ZNF239-204ENST00000491188 CEP164Q9UPV0 1460 aa26.31■■□□□ 1.8
ZNF239-204ENST00000491188 CCDC88BA6NC98 1476 aa26.3■■□□□ 1.8
ZNF239-204ENST00000491188 WDR62O43379 1518 aa26.28■■□□□ 1.8
ZNF239-204ENST00000491188 DNAJC5Q9H3Z4 198 aa26.13■■□□□ 1.77
ZNF239-204ENST00000491188 URB2Q14146 1524 aaKnown RBP26.07■■□□□ 1.76
ZNF239-204ENST00000491188 TOPBP1Q92547 1522 aa25.88■■□□□ 1.73
ZNF239-204ENST00000491188 ABCC8Q09428 1581 aa25.87■■□□□ 1.73
ZNF239-204ENST00000491188 SUPT5HO00267 1087 aaKnown RBP25.87■■□□□ 1.73
ZNF239-204ENST00000491188 DNMBPQ6XZF7 1577 aa25.84■■□□□ 1.73
ZNF239-204ENST00000491188 IFT140Q96RY7 1462 aa25.76■■□□□ 1.71
ZNF239-204ENST00000491188 ZNF608Q9ULD9 1512 aaPredicted RBP25.66■■□□□ 1.7
ZNF239-204ENST00000491188 TARBP1Q13395 1621 aaKnown RBP25.65■■□□□ 1.7
ZNF239-204ENST00000491188 POLA1P09884 1462 aaPredicted RBP25.63■■□□□ 1.69
ZNF239-204ENST00000491188 EIF4G3O43432 1585 aaKnown RBP25.6■■□□□ 1.69
ZNF239-204ENST00000491188 CUX1P39880 1505 aa25.58■■□□□ 1.69
ZNF239-204ENST00000491188 FGD5Q6ZNL6 1462 aa25.53■■□□□ 1.68
ZNF239-204ENST00000491188 SOGA1O94964 1423 aa25.5■■□□□ 1.67
ZNF239-204ENST00000491188 RAD54L2Q9Y4B4 1467 aa25.5■■□□□ 1.67
ZNF239-204ENST00000491188 OSCARQ8IYS5 282 aa25.48■■□□□ 1.67
ZNF239-204ENST00000491188 AQRO60306 1485 aaKnown RBP eCLIP25.47■■□□□ 1.67
ZNF239-204ENST00000491188 WDR97A6NE52 1622 aa25.46■■□□□ 1.67
ZNF239-204ENST00000491188 CHD1O14646 1710 aa25.38■■□□□ 1.65
ZNF239-204ENST00000491188 TDRD9Q8NDG6 1382 aaKnown RBP25.36■■□□□ 1.65
ZNF239-204ENST00000491188 BIVM-ERCC5R4GMW8 1640 aa25.35■■□□□ 1.65
ZNF239-204ENST00000491188 TOP2BQ02880 1626 aa25.32■■□□□ 1.64
ZNF239-204ENST00000491188 WRNQ14191 1432 aaPredicted RBP eCLIP25.29■■□□□ 1.64
ZNF239-204ENST00000491188 PBRM1Q86U86 1689 aa25.28■■□□□ 1.64
ZNF239-204ENST00000491188 ABCA10Q8WWZ4 1543 aa25.27■■□□□ 1.64
ZNF239-204ENST00000491188 SYNJ1O43426 1573 aa25.27■■□□□ 1.64
ZNF239-204ENST00000491188 GRIN2BQ13224 1484 aa25.25■■□□□ 1.63
ZNF239-204ENST00000491188 SNAPC4Q5SXM2 1469 aa25.24■■□□□ 1.63
ZNF239-204ENST00000491188 ABCA5Q8WWZ7 1642 aa25.23■■□□□ 1.63
ZNF239-204ENST00000491188 GAPVD1Q14C86 1478 aa25.22■■□□□ 1.63
ZNF239-204ENST00000491188 MAGI1Q96QZ7 1491 aaPredicted RBP25.22■■□□□ 1.63
ZNF239-204ENST00000491188 FBLN2P98095 1184 aa25.18■■□□□ 1.62
ZNF239-204ENST00000491188 RIMBP3CA6NJZ7 1639 aa25.17■■□□□ 1.62
ZNF239-204ENST00000491188 RIMBP3BA6NNM3 1639 aa25.17■■□□□ 1.62
ZNF239-204ENST00000491188 RIMBP3Q9UFD9 1639 aa25.17■■□□□ 1.62
ZNF239-204ENST00000491188 SYNJ2O15056 1496 aa25.13■■□□□ 1.61
ZNF239-204ENST00000491188 TRIM41Q8WV44 630 aa25.12■■□□□ 1.61
ZNF239-204ENST00000491188 ARHGEF11O15085 1522 aa25.11■■□□□ 1.61
ZNF239-204ENST00000491188 CHMP7Q8WUX9 453 aaPredicted RBP25.09■■□□□ 1.61
ZNF239-204ENST00000491188 CLASP1Q7Z460 1538 aa25.04■■□□□ 1.6
ZNF239-204ENST00000491188 ADAMTS12P58397 1594 aa25.01■■□□□ 1.59
ZNF239-204ENST00000491188 ERICH3Q5RHP9 1530 aa24.99■■□□□ 1.59
ZNF239-204ENST00000491188 GRIN2AQ12879 1464 aa24.93■■□□□ 1.58
ZNF239-204ENST00000491188 FHAD1B1AJZ9 1412 aa24.91■■□□□ 1.58
ZNF239-204ENST00000491188 ARAP1Q96P48 1450 aa24.88■■□□□ 1.57
ZNF239-204ENST00000491188 CEP170Q5SW79 1584 aa24.84■■□□□ 1.57
ZNF239-204ENST00000491188 CYB5RLQ6IPT4 315 aa24.83■■□□□ 1.57
ZNF239-204ENST00000491188 NUP160Q12769 1436 aa24.83■■□□□ 1.57
ZNF239-204ENST00000491188 KIF27Q86VH2 1401 aa24.78■■□□□ 1.56
ZNF239-204ENST00000491188 CUL7Q14999 1698 aa24.75■■□□□ 1.55
ZNF239-204ENST00000491188 SHROOM2Q13796 1616 aa24.73■■□□□ 1.55
ZNF239-204ENST00000491188 IGF1RP08069 1367 aa24.7■■□□□ 1.55
ZNF239-204ENST00000491188 ERCC6L2Q5T890 1561 aa24.65■■□□□ 1.54
ZNF239-204ENST00000491188 RUSC2Q8N2Y8 1516 aa24.64■■□□□ 1.53
ZNF239-204ENST00000491188 CARMIL1Q5VZK9 1371 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms