RNA–Protein interactions for RNA: ENST00000491162.1

CLCN2-209, Transcript of chloride voltage-gated channel 2, humanhuman

TSL 4

Gene CLCN2, Length 557 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-209ENST00000491162 NISCHQ9Y2I1 1504 aa28.82■■■□□ 2.2
CLCN2-209ENST00000491162 ABCC9O60706 1549 aa25.93■■□□□ 1.74
CLCN2-209ENST00000491162 CCDC180Q9P1Z9 1646 aa25.88■■□□□ 1.73
CLCN2-209ENST00000491162 RB1CC1Q8TDY2 1594 aa24.59■■□□□ 1.53
CLCN2-209ENST00000491162 NACADO15069 1562 aa24.4■■□□□ 1.5
CLCN2-209ENST00000491162 DNAJC5BQ9UF47 199 aa24.35■■□□□ 1.49
CLCN2-209ENST00000491162 DCAF8L2P0C7V8 631 aa24.32■■□□□ 1.48
CLCN2-209ENST00000491162 UNC13AQ9UPW8 1703 aa24.27■■□□□ 1.48
CLCN2-209ENST00000491162 PABPN1Q86U42 306 aaKnown RBP eCLIP24.13■■□□□ 1.45
CLCN2-209ENST00000491162 BICRAQ9NZM4 1560 aa24■■□□□ 1.43
CLCN2-209ENST00000491162 MYO15BQ96JP2 1530 aa24■■□□□ 1.43
CLCN2-209ENST00000491162 ZCCHC6Q5VYS8 1495 aaKnown RBP23.9■■□□□ 1.42
CLCN2-209ENST00000491162 DCAF1Q9Y4B6 1507 aa23.73■■□□□ 1.39
CLCN2-209ENST00000491162 SCRIBQ14160 1630 aa23.68■■□□□ 1.38
CLCN2-209ENST00000491162 SHROOM4Q9ULL8 1493 aa23.43■■□□□ 1.34
CLCN2-209ENST00000491162 CC2D2AQ9P2K1 1620 aa23.43■■□□□ 1.34
CLCN2-209ENST00000491162 EIF4G1Q04637 1599 aaKnown RBP23.35■■□□□ 1.33
CLCN2-209ENST00000491162 CECR2Q9BXF3 1484 aa23.3■■□□□ 1.32
CLCN2-209ENST00000491162 SMARCA4P51532 1647 aa22.53■■□□□ 1.2
CLCN2-209ENST00000491162 NCAPD3P42695 1498 aa22.51■■□□□ 1.19
CLCN2-209ENST00000491162 ATAD2BQ9ULI0 1458 aa22.5■■□□□ 1.19
CLCN2-209ENST00000491162 SMARCA2P51531 1590 aa22.39■■□□□ 1.18
CLCN2-209ENST00000491162 HMGXB3Q12766 1538 aa22.38■■□□□ 1.17
CLCN2-209ENST00000491162 BAZ1AQ9NRL2 1556 aaPredicted RBP22.34■■□□□ 1.17
CLCN2-209ENST00000491162 NESP48681 1621 aa22.32■■□□□ 1.16
CLCN2-209ENST00000491162 ERCC6Q03468 1493 aa22.3■■□□□ 1.16
CLCN2-209ENST00000491162 MROH2BQ7Z745 1585 aa22.28■■□□□ 1.16
CLCN2-209ENST00000491162 BAZ1BQ9UIG0 1483 aaKnown RBP22.28■■□□□ 1.16
CLCN2-209ENST00000491162 PEG3Q9GZU2 1588 aa22.25■■□□□ 1.15
CLCN2-209ENST00000491162 CUX2O14529 1486 aa22.22■■□□□ 1.15
CLCN2-209ENST00000491162 DNAJC5Q9H3Z4 198 aa22.22■■□□□ 1.15
CLCN2-209ENST00000491162 THOC2Q8NI27 1593 aaKnown RBP22.08■■□□□ 1.13
CLCN2-209ENST00000491162 KIF21AQ7Z4S6 1674 aa22.08■■□□□ 1.13
CLCN2-209ENST00000491162 WIZO95785 1651 aa22.07■■□□□ 1.12
CLCN2-209ENST00000491162 LAMC3Q9Y6N6 1575 aa22.04■■□□□ 1.12
CLCN2-209ENST00000491162 PDS5BQ9NTI5 1447 aa21.83■■□□□ 1.09
CLCN2-209ENST00000491162 CADPSQ9ULU8 1353 aa21.83■■□□□ 1.08
CLCN2-209ENST00000491162 RSF1Q96T23 1441 aaPredicted RBP21.75■■□□□ 1.07
CLCN2-209ENST00000491162 MRC2Q9UBG0 1479 aa21.73■■□□□ 1.07
CLCN2-209ENST00000491162 WDR62O43379 1518 aa21.7■■□□□ 1.07
CLCN2-209ENST00000491162 TOP2AP11388 1531 aaKnown RBP21.68■■□□□ 1.06
CLCN2-209ENST00000491162 CEP164Q9UPV0 1460 aa21.64■■□□□ 1.06
CLCN2-209ENST00000491162 FANCD2Q9BXW9 1451 aa21.64■■□□□ 1.05
CLCN2-209ENST00000491162 CFTRP13569 1480 aa21.6■■□□□ 1.05
CLCN2-209ENST00000491162 PRDM2Q13029 1718 aa21.53■■□□□ 1.04
CLCN2-209ENST00000491162 URB2Q14146 1524 aaKnown RBP21.52■■□□□ 1.04
CLCN2-209ENST00000491162 CCDC88BA6NC98 1476 aa21.45■■□□□ 1.02
CLCN2-209ENST00000491162 TRIM41Q8WV44 630 aa21.33■■□□□ 1.01
CLCN2-209ENST00000491162 ZNF608Q9ULD9 1512 aaPredicted RBP21.27■■□□□ 1
CLCN2-209ENST00000491162 TOPBP1Q92547 1522 aa21.25■□□□□ 0.99
CLCN2-209ENST00000491162 IFT140Q96RY7 1462 aa21.18■□□□□ 0.98
CLCN2-209ENST00000491162 OSCARQ8IYS5 282 aa21.17■□□□□ 0.98
CLCN2-209ENST00000491162 EIF4G3O43432 1585 aaKnown RBP21.16■□□□□ 0.98
CLCN2-209ENST00000491162 DNMBPQ6XZF7 1577 aa21.16■□□□□ 0.98
CLCN2-209ENST00000491162 TARBP1Q13395 1621 aaKnown RBP21.11■□□□□ 0.97
CLCN2-209ENST00000491162 RIMBP3CA6NJZ7 1639 aa21.08■□□□□ 0.97
CLCN2-209ENST00000491162 RIMBP3BA6NNM3 1639 aa21.08■□□□□ 0.97
CLCN2-209ENST00000491162 RIMBP3Q9UFD9 1639 aa21.08■□□□□ 0.97
CLCN2-209ENST00000491162 CHD1O14646 1710 aa21.07■□□□□ 0.96
CLCN2-209ENST00000491162 ABCC8Q09428 1581 aa21.06■□□□□ 0.96
CLCN2-209ENST00000491162 AQRO60306 1485 aaKnown RBP eCLIP21.04■□□□□ 0.962e-7■■■■□ 25.7
CLCN2-209ENST00000491162 POLA1P09884 1462 aaPredicted RBP21.03■□□□□ 0.96
CLCN2-209ENST00000491162 RAD54L2Q9Y4B4 1467 aa21.01■□□□□ 0.95
CLCN2-209ENST00000491162 ARHGEF11O15085 1522 aa20.96■□□□□ 0.95
CLCN2-209ENST00000491162 CUX1P39880 1505 aa20.93■□□□□ 0.94
CLCN2-209ENST00000491162 FGD5Q6ZNL6 1462 aa20.91■□□□□ 0.94
CLCN2-209ENST00000491162 TDRD9Q8NDG6 1382 aaKnown RBP20.89■□□□□ 0.93
CLCN2-209ENST00000491162 SOGA1O94964 1423 aa20.88■□□□□ 0.93
CLCN2-209ENST00000491162 WDR97A6NE52 1622 aa20.85■□□□□ 0.93
CLCN2-209ENST00000491162 FBLN2P98095 1184 aa20.84■□□□□ 0.93
CLCN2-209ENST00000491162 SNAPC4Q5SXM2 1469 aa20.82■□□□□ 0.92
CLCN2-209ENST00000491162 SUPT5HO00267 1087 aaKnown RBP20.81■□□□□ 0.92
CLCN2-209ENST00000491162 ARAP1Q96P48 1450 aa20.78■□□□□ 0.92
CLCN2-209ENST00000491162 PBRM1Q86U86 1689 aa20.77■□□□□ 0.92
CLCN2-209ENST00000491162 CYB5RLQ6IPT4 315 aa20.75■□□□□ 0.91
CLCN2-209ENST00000491162 CLASP1Q7Z460 1538 aa20.73■□□□□ 0.91
CLCN2-209ENST00000491162 GRIN2BQ13224 1484 aa20.69■□□□□ 0.9
CLCN2-209ENST00000491162 MAGI1Q96QZ7 1491 aaPredicted RBP20.69■□□□□ 0.9
CLCN2-209ENST00000491162 ABCA5Q8WWZ7 1642 aa20.67■□□□□ 0.9
CLCN2-209ENST00000491162 SYNJ1O43426 1573 aa20.65■□□□□ 0.9
CLCN2-209ENST00000491162 GAPVD1Q14C86 1478 aa20.64■□□□□ 0.89
CLCN2-209ENST00000491162 SYNJ2O15056 1496 aa20.63■□□□□ 0.89
CLCN2-209ENST00000491162 CHMP7Q8WUX9 453 aaPredicted RBP20.63■□□□□ 0.89
CLCN2-209ENST00000491162 ABCA10Q8WWZ4 1543 aa20.63■□□□□ 0.89
CLCN2-209ENST00000491162 BIVM-ERCC5R4GMW8 1640 aa20.59■□□□□ 0.89
CLCN2-209ENST00000491162 TOP2BQ02880 1626 aa20.56■□□□□ 0.88
CLCN2-209ENST00000491162 ADAMTS12P58397 1594 aa20.51■□□□□ 0.87
CLCN2-209ENST00000491162 ERCC6L2Q5T890 1561 aa20.51■□□□□ 0.87
CLCN2-209ENST00000491162 TRHP20396 242 aaPredicted RBP20.5■□□□□ 0.87
CLCN2-209ENST00000491162 WRNQ14191 1432 aaPredicted RBP eCLIP20.49■□□□□ 0.87
CLCN2-209ENST00000491162 CEP170Q5SW79 1584 aa20.48■□□□□ 0.87
CLCN2-209ENST00000491162 GRIN2AQ12879 1464 aa20.46■□□□□ 0.87
CLCN2-209ENST00000491162 NUP160Q12769 1436 aa20.38■□□□□ 0.85
CLCN2-209ENST00000491162 SHROOM2Q13796 1616 aa20.35■□□□□ 0.85
CLCN2-209ENST00000491162 AEBP2Q6ZN18 517 aaPredicted RBP20.35■□□□□ 0.85
CLCN2-209ENST00000491162 ERICH3Q5RHP9 1530 aa20.35■□□□□ 0.85
CLCN2-209ENST00000491162 FHAD1B1AJZ9 1412 aa20.35■□□□□ 0.85
CLCN2-209ENST00000491162 RUSC2Q8N2Y8 1516 aa20.23■□□□□ 0.83
CLCN2-209ENST00000491162 PRG4Q92954 1404 aaPredicted RBP20.19■□□□□ 0.82
CLCN2-209ENST00000491162 KIF13AQ9H1H9 1805 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms