RNA–Protein interactions for RNA: ENST00000491021.1

POLDIP3-208, Transcript of DNA polymerase delta interacting protein 3, humanhuman

TSL 5

Gene POLDIP3, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLDIP3-208ENST00000491021 NISCHQ9Y2I1 1504 aa26.04■■□□□ 1.76
POLDIP3-208ENST00000491021 CCDC180Q9P1Z9 1646 aa23.35■■□□□ 1.33
POLDIP3-208ENST00000491021 ABCC9O60706 1549 aa23.14■■□□□ 1.3
POLDIP3-208ENST00000491021 RB1CC1Q8TDY2 1594 aa22.12■■□□□ 1.13
POLDIP3-208ENST00000491021 NACADO15069 1562 aa21.99■■□□□ 1.11
POLDIP3-208ENST00000491021 DCAF8L2P0C7V8 631 aa21.96■■□□□ 1.11
POLDIP3-208ENST00000491021 MYO15BQ96JP2 1530 aa21.68■■□□□ 1.06
POLDIP3-208ENST00000491021 UNC13AQ9UPW8 1703 aa21.66■■□□□ 1.06
POLDIP3-208ENST00000491021 ZCCHC6Q5VYS8 1495 aaKnown RBP21.64■■□□□ 1.06
POLDIP3-208ENST00000491021 PABPN1Q86U42 306 aaKnown RBP eCLIP21.54■■□□□ 1.04
POLDIP3-208ENST00000491021 DCAF1Q9Y4B6 1507 aa21.5■■□□□ 1.03
POLDIP3-208ENST00000491021 BICRAQ9NZM4 1560 aa21.4■■□□□ 1.02
POLDIP3-208ENST00000491021 DNAJC5BQ9UF47 199 aa21.38■■□□□ 1.01
POLDIP3-208ENST00000491021 SCRIBQ14160 1630 aa21.33■■□□□ 1.01
POLDIP3-208ENST00000491021 SHROOM4Q9ULL8 1493 aa21.14■□□□□ 0.98
POLDIP3-208ENST00000491021 CC2D2AQ9P2K1 1620 aa20.91■□□□□ 0.94
POLDIP3-208ENST00000491021 EIF4G1Q04637 1599 aaKnown RBP20.9■□□□□ 0.94
POLDIP3-208ENST00000491021 CECR2Q9BXF3 1484 aa20.8■□□□□ 0.92
POLDIP3-208ENST00000491021 SMARCA4P51532 1647 aa20.33■□□□□ 0.84
POLDIP3-208ENST00000491021 SMARCA2P51531 1590 aa20.24■□□□□ 0.83
POLDIP3-208ENST00000491021 BAZ1AQ9NRL2 1556 aaPredicted RBP20.24■□□□□ 0.83
POLDIP3-208ENST00000491021 ATAD2BQ9ULI0 1458 aa20.24■□□□□ 0.83
POLDIP3-208ENST00000491021 NCAPD3P42695 1498 aa20.23■□□□□ 0.83
POLDIP3-208ENST00000491021 HMGXB3Q12766 1538 aa20.17■□□□□ 0.82
POLDIP3-208ENST00000491021 BAZ1BQ9UIG0 1483 aaKnown RBP20.11■□□□□ 0.81
POLDIP3-208ENST00000491021 MROH2BQ7Z745 1585 aa20.08■□□□□ 0.8
POLDIP3-208ENST00000491021 PEG3Q9GZU2 1588 aa20.06■□□□□ 0.8
POLDIP3-208ENST00000491021 ERCC6Q03468 1493 aa20.01■□□□□ 0.79
POLDIP3-208ENST00000491021 NESP48681 1621 aa19.91■□□□□ 0.78
POLDIP3-208ENST00000491021 WIZO95785 1651 aa19.91■□□□□ 0.78
POLDIP3-208ENST00000491021 CUX2O14529 1486 aa19.84■□□□□ 0.77
POLDIP3-208ENST00000491021 LAMC3Q9Y6N6 1575 aa19.83■□□□□ 0.76
POLDIP3-208ENST00000491021 KIF21AQ7Z4S6 1674 aa19.75■□□□□ 0.75
POLDIP3-208ENST00000491021 THOC2Q8NI27 1593 aaKnown RBP19.7■□□□□ 0.74
POLDIP3-208ENST00000491021 RSF1Q96T23 1441 aaPredicted RBP19.7■□□□□ 0.74
POLDIP3-208ENST00000491021 PDS5BQ9NTI5 1447 aa19.68■□□□□ 0.74
POLDIP3-208ENST00000491021 CADPSQ9ULU8 1353 aa19.65■□□□□ 0.74
POLDIP3-208ENST00000491021 TOP2AP11388 1531 aaKnown RBP19.65■□□□□ 0.74
POLDIP3-208ENST00000491021 MRC2Q9UBG0 1479 aa19.53■□□□□ 0.72
POLDIP3-208ENST00000491021 CEP164Q9UPV0 1460 aa19.51■□□□□ 0.71
POLDIP3-208ENST00000491021 DNAJC5Q9H3Z4 198 aa19.5■□□□□ 0.71
POLDIP3-208ENST00000491021 FANCD2Q9BXW9 1451 aa19.48■□□□□ 0.71
POLDIP3-208ENST00000491021 CFTRP13569 1480 aa19.47■□□□□ 0.71
POLDIP3-208ENST00000491021 WDR62O43379 1518 aa19.46■□□□□ 0.71
POLDIP3-208ENST00000491021 PRDM2Q13029 1718 aa19.45■□□□□ 0.7
POLDIP3-208ENST00000491021 CCDC88BA6NC98 1476 aa19.37■□□□□ 0.69
POLDIP3-208ENST00000491021 URB2Q14146 1524 aaKnown RBP19.28■□□□□ 0.68
POLDIP3-208ENST00000491021 TOPBP1Q92547 1522 aa19.13■□□□□ 0.65
POLDIP3-208ENST00000491021 DNMBPQ6XZF7 1577 aa19.1■□□□□ 0.65
POLDIP3-208ENST00000491021 ABCC8Q09428 1581 aa19.09■□□□□ 0.65
POLDIP3-208ENST00000491021 IFT140Q96RY7 1462 aa19.08■□□□□ 0.64
POLDIP3-208ENST00000491021 SUPT5HO00267 1087 aaKnown RBP19.06■□□□□ 0.64
POLDIP3-208ENST00000491021 ZNF608Q9ULD9 1512 aaPredicted RBP19.01■□□□□ 0.63
POLDIP3-208ENST00000491021 EIF4G3O43432 1585 aaKnown RBP18.98■□□□□ 0.63
POLDIP3-208ENST00000491021 POLA1P09884 1462 aaPredicted RBP18.94■□□□□ 0.62
POLDIP3-208ENST00000491021 TARBP1Q13395 1621 aaKnown RBP18.93■□□□□ 0.62
POLDIP3-208ENST00000491021 OSCARQ8IYS5 282 aa18.93■□□□□ 0.62
POLDIP3-208ENST00000491021 CUX1P39880 1505 aa18.87■□□□□ 0.61
POLDIP3-208ENST00000491021 FGD5Q6ZNL6 1462 aa18.87■□□□□ 0.61
POLDIP3-208ENST00000491021 TRIM41Q8WV44 630 aa18.87■□□□□ 0.61
POLDIP3-208ENST00000491021 AQRO60306 1485 aaKnown RBP eCLIP18.86■□□□□ 0.613e-7■■■■■ 39.4
POLDIP3-208ENST00000491021 RAD54L2Q9Y4B4 1467 aa18.86■□□□□ 0.61
POLDIP3-208ENST00000491021 SOGA1O94964 1423 aa18.84■□□□□ 0.61
POLDIP3-208ENST00000491021 CHD1O14646 1710 aa18.84■□□□□ 0.61
POLDIP3-208ENST00000491021 TDRD9Q8NDG6 1382 aaKnown RBP18.78■□□□□ 0.6
POLDIP3-208ENST00000491021 WDR97A6NE52 1622 aa18.78■□□□□ 0.6
POLDIP3-208ENST00000491021 FBLN2P98095 1184 aa18.75■□□□□ 0.59
POLDIP3-208ENST00000491021 RIMBP3CA6NJZ7 1639 aa18.74■□□□□ 0.59
POLDIP3-208ENST00000491021 RIMBP3BA6NNM3 1639 aa18.74■□□□□ 0.59
POLDIP3-208ENST00000491021 RIMBP3Q9UFD9 1639 aa18.74■□□□□ 0.59
POLDIP3-208ENST00000491021 SNAPC4Q5SXM2 1469 aa18.72■□□□□ 0.59
POLDIP3-208ENST00000491021 PBRM1Q86U86 1689 aa18.72■□□□□ 0.59
POLDIP3-208ENST00000491021 GRIN2BQ13224 1484 aa18.68■□□□□ 0.58
POLDIP3-208ENST00000491021 ARHGEF11O15085 1522 aa18.67■□□□□ 0.58
POLDIP3-208ENST00000491021 BIVM-ERCC5R4GMW8 1640 aa18.66■□□□□ 0.58
POLDIP3-208ENST00000491021 MAGI1Q96QZ7 1491 aaPredicted RBP18.65■□□□□ 0.58
POLDIP3-208ENST00000491021 GAPVD1Q14C86 1478 aa18.65■□□□□ 0.58
POLDIP3-208ENST00000491021 WRNQ14191 1432 aaPredicted RBP eCLIP18.64■□□□□ 0.57
POLDIP3-208ENST00000491021 ABCA10Q8WWZ4 1543 aa18.64■□□□□ 0.57
POLDIP3-208ENST00000491021 TOP2BQ02880 1626 aa18.63■□□□□ 0.57
POLDIP3-208ENST00000491021 SYNJ1O43426 1573 aa18.63■□□□□ 0.57
POLDIP3-208ENST00000491021 ABCA5Q8WWZ7 1642 aa18.63■□□□□ 0.57
POLDIP3-208ENST00000491021 CHMP7Q8WUX9 453 aaPredicted RBP18.61■□□□□ 0.57
POLDIP3-208ENST00000491021 SYNJ2O15056 1496 aa18.58■□□□□ 0.57
POLDIP3-208ENST00000491021 CLASP1Q7Z460 1538 aa18.54■□□□□ 0.56
POLDIP3-208ENST00000491021 ARAP1Q96P48 1450 aa18.5■□□□□ 0.55
POLDIP3-208ENST00000491021 ADAMTS12P58397 1594 aa18.5■□□□□ 0.55
POLDIP3-208ENST00000491021 CYB5RLQ6IPT4 315 aa18.49■□□□□ 0.55
POLDIP3-208ENST00000491021 GRIN2AQ12879 1464 aa18.44■□□□□ 0.54
POLDIP3-208ENST00000491021 ERICH3Q5RHP9 1530 aa18.42■□□□□ 0.54
POLDIP3-208ENST00000491021 FHAD1B1AJZ9 1412 aa18.4■□□□□ 0.54
POLDIP3-208ENST00000491021 CEP170Q5SW79 1584 aa18.38■□□□□ 0.53
POLDIP3-208ENST00000491021 NUP160Q12769 1436 aa18.33■□□□□ 0.53
POLDIP3-208ENST00000491021 TRHP20396 242 aaPredicted RBP18.29■□□□□ 0.52
POLDIP3-208ENST00000491021 ERCC6L2Q5T890 1561 aa18.27■□□□□ 0.52
POLDIP3-208ENST00000491021 KIF27Q86VH2 1401 aa18.27■□□□□ 0.52
POLDIP3-208ENST00000491021 SHROOM2Q13796 1616 aa18.26■□□□□ 0.51
POLDIP3-208ENST00000491021 CUL7Q14999 1698 aa18.25■□□□□ 0.51
POLDIP3-208ENST00000491021 RUSC2Q8N2Y8 1516 aa18.23■□□□□ 0.51
POLDIP3-208ENST00000491021 PRG4Q92954 1404 aaPredicted RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms