RNA–Protein interactions for RNA: ENST00000490970.5

ARHGEF39-206, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 5

Gene ARHGEF39, Length 1,270 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-206ENST00000490970 NISCHQ9Y2I1 1504 aa39.67■■■■□ 3.94
ARHGEF39-206ENST00000490970 CCDC180Q9P1Z9 1646 aa35.38■■■■□ 3.25
ARHGEF39-206ENST00000490970 ABCC9O60706 1549 aa35.16■■■■□ 3.22
ARHGEF39-206ENST00000490970 RB1CC1Q8TDY2 1594 aa33.55■■■□□ 2.96
ARHGEF39-206ENST00000490970 DCAF8L2P0C7V8 631 aa33.47■■■□□ 2.95
ARHGEF39-206ENST00000490970 NACADO15069 1562 aa33.39■■■□□ 2.94
ARHGEF39-206ENST00000490970 MYO15BQ96JP2 1530 aa33.02■■■□□ 2.88
ARHGEF39-206ENST00000490970 ZCCHC6Q5VYS8 1495 aaKnown RBP32.93■■■□□ 2.86
ARHGEF39-206ENST00000490970 PABPN1Q86U42 306 aaKnown RBP eCLIP32.84■■■□□ 2.85
ARHGEF39-206ENST00000490970 UNC13AQ9UPW8 1703 aa32.8■■■□□ 2.84
ARHGEF39-206ENST00000490970 DCAF1Q9Y4B6 1507 aa32.73■■■□□ 2.83
ARHGEF39-206ENST00000490970 DNAJC5BQ9UF47 199 aa32.73■■■□□ 2.83
ARHGEF39-206ENST00000490970 BICRAQ9NZM4 1560 aa32.58■■■□□ 2.81
ARHGEF39-206ENST00000490970 SCRIBQ14160 1630 aa32.33■■■□□ 2.77
ARHGEF39-206ENST00000490970 SHROOM4Q9ULL8 1493 aa32.09■■■□□ 2.73
ARHGEF39-206ENST00000490970 EIF4G1Q04637 1599 aaKnown RBP31.75■■■□□ 2.67
ARHGEF39-206ENST00000490970 CC2D2AQ9P2K1 1620 aa31.74■■■□□ 2.67
ARHGEF39-206ENST00000490970 CECR2Q9BXF3 1484 aa31.61■■■□□ 2.65
ARHGEF39-206ENST00000490970 SMARCA4P51532 1647 aa30.85■■■□□ 2.53
ARHGEF39-206ENST00000490970 NCAPD3P42695 1498 aa30.85■■■□□ 2.53
ARHGEF39-206ENST00000490970 ATAD2BQ9ULI0 1458 aa30.82■■■□□ 2.53
ARHGEF39-206ENST00000490970 BAZ1AQ9NRL2 1556 aaPredicted RBP30.75■■■□□ 2.51
ARHGEF39-206ENST00000490970 SMARCA2P51531 1590 aa30.71■■■□□ 2.51
ARHGEF39-206ENST00000490970 HMGXB3Q12766 1538 aa30.62■■■□□ 2.49
ARHGEF39-206ENST00000490970 MROH2BQ7Z745 1585 aa30.6■■■□□ 2.49
ARHGEF39-206ENST00000490970 BAZ1BQ9UIG0 1483 aaKnown RBP30.53■■■□□ 2.48
ARHGEF39-206ENST00000490970 PEG3Q9GZU2 1588 aa30.52■■■□□ 2.48
ARHGEF39-206ENST00000490970 NESP48681 1621 aa30.3■■■□□ 2.44
ARHGEF39-206ENST00000490970 ERCC6Q03468 1493 aa30.3■■■□□ 2.44
ARHGEF39-206ENST00000490970 WIZO95785 1651 aa30.24■■■□□ 2.43
ARHGEF39-206ENST00000490970 RSF1Q96T23 1441 aaPredicted RBP30.09■■■□□ 2.41
ARHGEF39-206ENST00000490970 CUX2O14529 1486 aa30.08■■■□□ 2.41
ARHGEF39-206ENST00000490970 LAMC3Q9Y6N6 1575 aa30.07■■■□□ 2.4
ARHGEF39-206ENST00000490970 CADPSQ9ULU8 1353 aa29.95■■■□□ 2.39
ARHGEF39-206ENST00000490970 PDS5BQ9NTI5 1447 aa29.92■■■□□ 2.38
ARHGEF39-206ENST00000490970 KIF21AQ7Z4S6 1674 aa29.88■■■□□ 2.37
ARHGEF39-206ENST00000490970 THOC2Q8NI27 1593 aaKnown RBP29.86■■■□□ 2.37
ARHGEF39-206ENST00000490970 TOP2AP11388 1531 aaKnown RBP29.85■■■□□ 2.37
ARHGEF39-206ENST00000490970 DNAJC5Q9H3Z4 198 aa29.76■■■□□ 2.35
ARHGEF39-206ENST00000490970 CFTRP13569 1480 aa29.67■■■□□ 2.34
ARHGEF39-206ENST00000490970 MRC2Q9UBG0 1479 aa29.63■■■□□ 2.33
ARHGEF39-206ENST00000490970 FANCD2Q9BXW9 1451 aa29.61■■■□□ 2.33
ARHGEF39-206ENST00000490970 CEP164Q9UPV0 1460 aa29.59■■■□□ 2.33
ARHGEF39-206ENST00000490970 CCDC88BA6NC98 1476 aa29.55■■■□□ 2.32
ARHGEF39-206ENST00000490970 WDR62O43379 1518 aa29.53■■■□□ 2.32
ARHGEF39-206ENST00000490970 URB2Q14146 1524 aaKnown RBP29.35■■■□□ 2.29
ARHGEF39-206ENST00000490970 PRDM2Q13029 1718 aa29.34■■■□□ 2.29
ARHGEF39-206ENST00000490970 SUPT5HO00267 1087 aaKnown RBP29.11■■■□□ 2.25
ARHGEF39-206ENST00000490970 TOPBP1Q92547 1522 aa29.09■■■□□ 2.25
ARHGEF39-206ENST00000490970 ABCC8Q09428 1581 aa29.01■■■□□ 2.24
ARHGEF39-206ENST00000490970 IFT140Q96RY7 1462 aa28.98■■■□□ 2.23
ARHGEF39-206ENST00000490970 DNMBPQ6XZF7 1577 aa28.98■■■□□ 2.23
ARHGEF39-206ENST00000490970 ZNF608Q9ULD9 1512 aaPredicted RBP28.95■■■□□ 2.23
ARHGEF39-206ENST00000490970 OSCARQ8IYS5 282 aa28.85■■■□□ 2.21
ARHGEF39-206ENST00000490970 POLA1P09884 1462 aaPredicted RBP28.81■■■□□ 2.2
ARHGEF39-206ENST00000490970 TARBP1Q13395 1621 aaKnown RBP28.78■■■□□ 2.2
ARHGEF39-206ENST00000490970 EIF4G3O43432 1585 aaKnown RBP28.75■■■□□ 2.19
ARHGEF39-206ENST00000490970 AQRO60306 1485 aaKnown RBP eCLIP28.74■■■□□ 2.19
ARHGEF39-206ENST00000490970 RAD54L2Q9Y4B4 1467 aa28.74■■■□□ 2.19
ARHGEF39-206ENST00000490970 SOGA1O94964 1423 aa28.71■■■□□ 2.19
ARHGEF39-206ENST00000490970 CUX1P39880 1505 aa28.71■■■□□ 2.19
ARHGEF39-206ENST00000490970 FGD5Q6ZNL6 1462 aa28.69■■■□□ 2.18
ARHGEF39-206ENST00000490970 TRIM41Q8WV44 630 aa28.65■■■□□ 2.18
ARHGEF39-206ENST00000490970 TDRD9Q8NDG6 1382 aaKnown RBP28.63■■■□□ 2.17
ARHGEF39-206ENST00000490970 FBLN2P98095 1184 aa28.53■■■□□ 2.16
ARHGEF39-206ENST00000490970 CHD1O14646 1710 aa28.48■■■□□ 2.15
ARHGEF39-206ENST00000490970 WDR97A6NE52 1622 aa28.44■■■□□ 2.14
ARHGEF39-206ENST00000490970 SNAPC4Q5SXM2 1469 aa28.43■■■□□ 2.14
ARHGEF39-206ENST00000490970 RIMBP3CA6NJZ7 1639 aa28.39■■■□□ 2.13
ARHGEF39-206ENST00000490970 RIMBP3BA6NNM3 1639 aa28.39■■■□□ 2.13
ARHGEF39-206ENST00000490970 RIMBP3Q9UFD9 1639 aa28.39■■■□□ 2.13
ARHGEF39-206ENST00000490970 GRIN2BQ13224 1484 aa28.39■■■□□ 2.13
ARHGEF39-206ENST00000490970 WRNQ14191 1432 aaPredicted RBP eCLIP28.37■■■□□ 2.13
ARHGEF39-206ENST00000490970 ABCA10Q8WWZ4 1543 aa28.36■■■□□ 2.13
ARHGEF39-206ENST00000490970 GAPVD1Q14C86 1478 aa28.34■■■□□ 2.13
ARHGEF39-206ENST00000490970 CHMP7Q8WUX9 453 aaPredicted RBP28.34■■■□□ 2.13
ARHGEF39-206ENST00000490970 ARHGEF11O15085 1522 aa28.33■■■□□ 2.13
ARHGEF39-206ENST00000490970 MAGI1Q96QZ7 1491 aaPredicted RBP28.33■■■□□ 2.13
ARHGEF39-206ENST00000490970 SYNJ1O43426 1573 aa28.33■■■□□ 2.12
ARHGEF39-206ENST00000490970 TOP2BQ02880 1626 aa28.32■■■□□ 2.12
ARHGEF39-206ENST00000490970 BIVM-ERCC5R4GMW8 1640 aa28.31■■■□□ 2.12
ARHGEF39-206ENST00000490970 PBRM1Q86U86 1689 aa28.27■■■□□ 2.12
ARHGEF39-206ENST00000490970 ABCA5Q8WWZ7 1642 aa28.27■■■□□ 2.12
ARHGEF39-206ENST00000490970 SYNJ2O15056 1496 aa28.25■■■□□ 2.11
ARHGEF39-206ENST00000490970 CYB5RLQ6IPT4 315 aa28.19■■■□□ 2.1
ARHGEF39-206ENST00000490970 CLASP1Q7Z460 1538 aa28.15■■■□□ 2.1
ARHGEF39-206ENST00000490970 ARAP1Q96P48 1450 aa28.09■■■□□ 2.09
ARHGEF39-206ENST00000490970 ADAMTS12P58397 1594 aa28.03■■■□□ 2.08
ARHGEF39-206ENST00000490970 GRIN2AQ12879 1464 aa28.02■■■□□ 2.08
ARHGEF39-206ENST00000490970 FHAD1B1AJZ9 1412 aa28■■■□□ 2.07
ARHGEF39-206ENST00000490970 ERICH3Q5RHP9 1530 aa27.99■■■□□ 2.07
ARHGEF39-206ENST00000490970 CEP170Q5SW79 1584 aa27.91■■■□□ 2.06
ARHGEF39-206ENST00000490970 NUP160Q12769 1436 aa27.91■■■□□ 2.06
ARHGEF39-206ENST00000490970 KIF27Q86VH2 1401 aa27.8■■■□□ 2.04
ARHGEF39-206ENST00000490970 ERCC6L2Q5T890 1561 aa27.8■■■□□ 2.04
ARHGEF39-206ENST00000490970 IGF1RP08069 1367 aa27.78■■■□□ 2.04
ARHGEF39-206ENST00000490970 TRHP20396 242 aaPredicted RBP27.76■■■□□ 2.03
ARHGEF39-206ENST00000490970 SHROOM2Q13796 1616 aa27.72■■■□□ 2.03
ARHGEF39-206ENST00000490970 JPH4Q96JJ6 628 aa27.69■■■□□ 2.02
ARHGEF39-206ENST00000490970 PRG4Q92954 1404 aaPredicted RBP27.65■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 210.4 ms