RNA–Protein interactions for RNA: ENST00000490953.5

SBDS-204, Transcript of SBDS, ribosome maturation factor, humanhuman

TSL 1 (best)

Gene SBDS, Length 841 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDS-204ENST00000490953 NISCHQ9Y2I1 1504 aa45.2■■■■■ 4.83
SBDS-204ENST00000490953 CCDC180Q9P1Z9 1646 aa40.45■■■■■ 4.07
SBDS-204ENST00000490953 ABCC9O60706 1549 aa40.01■■■■□ 3.99
SBDS-204ENST00000490953 RB1CC1Q8TDY2 1594 aa38.29■■■■□ 3.72
SBDS-204ENST00000490953 NACADO15069 1562 aa38.1■■■■□ 3.69
SBDS-204ENST00000490953 DCAF8L2P0C7V8 631 aa37.95■■■■□ 3.67
SBDS-204ENST00000490953 MYO15BQ96JP2 1530 aa37.68■■■■□ 3.62
SBDS-204ENST00000490953 ZCCHC6Q5VYS8 1495 aaKnown RBP37.56■■■■□ 3.6
SBDS-204ENST00000490953 UNC13AQ9UPW8 1703 aa37.47■■■■□ 3.59
SBDS-204ENST00000490953 DCAF1Q9Y4B6 1507 aa37.36■■■■□ 3.57
SBDS-204ENST00000490953 PABPN1Q86U42 306 aaKnown RBP eCLIP37.26■■■■□ 3.56
SBDS-204ENST00000490953 BICRAQ9NZM4 1560 aa37.13■■■■□ 3.53
SBDS-204ENST00000490953 DNAJC5BQ9UF47 199 aa37.08■■■■□ 3.53
SBDS-204ENST00000490953 SCRIBQ14160 1630 aa36.88■■■■□ 3.5
SBDS-204ENST00000490953 SHROOM4Q9ULL8 1493 aa36.69■■■■□ 3.46
SBDS-204ENST00000490953 EIF4G1Q04637 1599 aaKnown RBP36.2■■■■□ 3.39
SBDS-204ENST00000490953 CC2D2AQ9P2K1 1620 aa36.19■■■■□ 3.38
SBDS-204ENST00000490953 CECR2Q9BXF3 1484 aa35.99■■■■□ 3.35
SBDS-204ENST00000490953 SMARCA4P51532 1647 aa35.21■■■■□ 3.23
SBDS-204ENST00000490953 NCAPD3P42695 1498 aa35.12■■■■□ 3.21
SBDS-204ENST00000490953 ATAD2BQ9ULI0 1458 aa35.09■■■■□ 3.21
SBDS-204ENST00000490953 BAZ1AQ9NRL2 1556 aaPredicted RBP35.08■■■■□ 3.21
SBDS-204ENST00000490953 SMARCA2P51531 1590 aa35.06■■■■□ 3.2
SBDS-204ENST00000490953 HMGXB3Q12766 1538 aa34.96■■■■□ 3.19
SBDS-204ENST00000490953 PEG3Q9GZU2 1588 aa34.84■■■■□ 3.17
SBDS-204ENST00000490953 MROH2BQ7Z745 1585 aa34.83■■■■□ 3.17
SBDS-204ENST00000490953 BAZ1BQ9UIG0 1483 aaKnown RBP34.81■■■■□ 3.16
SBDS-204ENST00000490953 ERCC6Q03468 1493 aa34.54■■■■□ 3.12
SBDS-204ENST00000490953 NESP48681 1621 aa34.48■■■■□ 3.11
SBDS-204ENST00000490953 WIZO95785 1651 aa34.47■■■■□ 3.11
SBDS-204ENST00000490953 LAMC3Q9Y6N6 1575 aa34.33■■■■□ 3.09
SBDS-204ENST00000490953 CUX2O14529 1486 aa34.33■■■■□ 3.09
SBDS-204ENST00000490953 RSF1Q96T23 1441 aaPredicted RBP34.22■■■■□ 3.07
SBDS-204ENST00000490953 KIF21AQ7Z4S6 1674 aa34.12■■■■□ 3.05
SBDS-204ENST00000490953 THOC2Q8NI27 1593 aaKnown RBP34.1■■■■□ 3.05
SBDS-204ENST00000490953 PDS5BQ9NTI5 1447 aa34.08■■■■□ 3.05
SBDS-204ENST00000490953 CADPSQ9ULU8 1353 aa34.08■■■■□ 3.05
SBDS-204ENST00000490953 TOP2AP11388 1531 aaKnown RBP34.06■■■■□ 3.04
SBDS-204ENST00000490953 MRC2Q9UBG0 1479 aa33.79■■■■□ 3
SBDS-204ENST00000490953 CFTRP13569 1480 aa33.78■■■■□ 3
SBDS-204ENST00000490953 DNAJC5Q9H3Z4 198 aa33.77■■■■□ 3
SBDS-204ENST00000490953 CEP164Q9UPV0 1460 aa33.75■■■□□ 2.99
SBDS-204ENST00000490953 FANCD2Q9BXW9 1451 aa33.73■■■□□ 2.99
SBDS-204ENST00000490953 WDR62O43379 1518 aa33.7■■■□□ 2.99
SBDS-204ENST00000490953 CCDC88BA6NC98 1476 aa33.63■■■□□ 2.97
SBDS-204ENST00000490953 PRDM2Q13029 1718 aa33.62■■■□□ 2.97
SBDS-204ENST00000490953 URB2Q14146 1524 aaKnown RBP33.43■■■□□ 2.94
SBDS-204ENST00000490953 TOPBP1Q92547 1522 aa33.14■■■□□ 2.9
SBDS-204ENST00000490953 ABCC8Q09428 1581 aa33.09■■■□□ 2.89
SBDS-204ENST00000490953 DNMBPQ6XZF7 1577 aa33.08■■■□□ 2.89
SBDS-204ENST00000490953 IFT140Q96RY7 1462 aa33.04■■■□□ 2.88
SBDS-204ENST00000490953 SUPT5HO00267 1087 aaKnown RBP33.02■■■□□ 2.88
SBDS-204ENST00000490953 ZNF608Q9ULD9 1512 aaPredicted RBP32.93■■■□□ 2.86
SBDS-204ENST00000490953 EIF4G3O43432 1585 aaKnown RBP32.84■■■□□ 2.85
SBDS-204ENST00000490953 POLA1P09884 1462 aaPredicted RBP32.82■■■□□ 2.84
SBDS-204ENST00000490953 TARBP1Q13395 1621 aaKnown RBP32.82■■■□□ 2.84
SBDS-204ENST00000490953 OSCARQ8IYS5 282 aa32.76■■■□□ 2.83
SBDS-204ENST00000490953 CUX1P39880 1505 aa32.72■■■□□ 2.83
SBDS-204ENST00000490953 FGD5Q6ZNL6 1462 aa32.68■■■□□ 2.82
SBDS-204ENST00000490953 RAD54L2Q9Y4B4 1467 aa32.68■■■□□ 2.82
SBDS-204ENST00000490953 AQRO60306 1485 aaKnown RBP eCLIP32.67■■■□□ 2.827e-7■■□□□ 14.1
SBDS-204ENST00000490953 SOGA1O94964 1423 aa32.66■■■□□ 2.82
SBDS-204ENST00000490953 WDR97A6NE52 1622 aa32.55■■■□□ 2.8
SBDS-204ENST00000490953 CHD1O14646 1710 aa32.54■■■□□ 2.8
SBDS-204ENST00000490953 TDRD9Q8NDG6 1382 aaKnown RBP32.53■■■□□ 2.8
SBDS-204ENST00000490953 TRIM41Q8WV44 630 aa32.51■■■□□ 2.79
SBDS-204ENST00000490953 SNAPC4Q5SXM2 1469 aa32.4■■■□□ 2.78
SBDS-204ENST00000490953 FBLN2P98095 1184 aa32.39■■■□□ 2.78
SBDS-204ENST00000490953 RIMBP3CA6NJZ7 1639 aa32.39■■■□□ 2.78
SBDS-204ENST00000490953 RIMBP3BA6NNM3 1639 aa32.39■■■□□ 2.78
SBDS-204ENST00000490953 RIMBP3Q9UFD9 1639 aa32.39■■■□□ 2.78
SBDS-204ENST00000490953 GRIN2BQ13224 1484 aa32.35■■■□□ 2.77
SBDS-204ENST00000490953 PBRM1Q86U86 1689 aa32.34■■■□□ 2.77
SBDS-204ENST00000490953 BIVM-ERCC5R4GMW8 1640 aa32.34■■■□□ 2.77
SBDS-204ENST00000490953 ABCA10Q8WWZ4 1543 aa32.32■■■□□ 2.76
SBDS-204ENST00000490953 MAGI1Q96QZ7 1491 aaPredicted RBP32.32■■■□□ 2.76
SBDS-204ENST00000490953 TOP2BQ02880 1626 aa32.32■■■□□ 2.76
SBDS-204ENST00000490953 WRNQ14191 1432 aaPredicted RBP eCLIP32.31■■■□□ 2.76
SBDS-204ENST00000490953 ARHGEF11O15085 1522 aa32.3■■■□□ 2.76
SBDS-204ENST00000490953 SYNJ1O43426 1573 aa32.29■■■□□ 2.76
SBDS-204ENST00000490953 GAPVD1Q14C86 1478 aa32.29■■■□□ 2.76
SBDS-204ENST00000490953 ABCA5Q8WWZ7 1642 aa32.28■■■□□ 2.76
SBDS-204ENST00000490953 CHMP7Q8WUX9 453 aaPredicted RBP32.2■■■□□ 2.75
SBDS-204ENST00000490953 SYNJ2O15056 1496 aa32.2■■■□□ 2.75
SBDS-204ENST00000490953 CLASP1Q7Z460 1538 aa32.12■■■□□ 2.73
SBDS-204ENST00000490953 ADAMTS12P58397 1594 aa32.02■■■□□ 2.72
SBDS-204ENST00000490953 ARAP1Q96P48 1450 aa32■■■□□ 2.71
SBDS-204ENST00000490953 CYB5RLQ6IPT4 315 aa31.98■■■□□ 2.71
SBDS-204ENST00000490953 GRIN2AQ12879 1464 aa31.94■■■□□ 2.7
SBDS-204ENST00000490953 ERICH3Q5RHP9 1530 aa31.94■■■□□ 2.7
SBDS-204ENST00000490953 FHAD1B1AJZ9 1412 aa31.89■■■□□ 2.7
SBDS-204ENST00000490953 CEP170Q5SW79 1584 aa31.83■■■□□ 2.69
SBDS-204ENST00000490953 NUP160Q12769 1436 aa31.8■■■□□ 2.68
SBDS-204ENST00000490953 KIF27Q86VH2 1401 aa31.67■■■□□ 2.66
SBDS-204ENST00000490953 SHROOM2Q13796 1616 aa31.66■■■□□ 2.66
SBDS-204ENST00000490953 ERCC6L2Q5T890 1561 aa31.64■■■□□ 2.66
SBDS-204ENST00000490953 CUL7Q14999 1698 aa31.6■■■□□ 2.65
SBDS-204ENST00000490953 RUSC2Q8N2Y8 1516 aa31.56■■■□□ 2.64
SBDS-204ENST00000490953 IGF1RP08069 1367 aa31.56■■■□□ 2.64
SBDS-204ENST00000490953 TRHP20396 242 aaPredicted RBP31.53■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms