RNA–Protein interactions for RNA: ENST00000490947.2

VWA3B-219, Transcript of von Willebrand factor A domain containing 3B, humanhuman

TSL 2

Gene VWA3B, Length 1,501 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VWA3B-219ENST00000490947 NISCHQ9Y2I1 1504 aa28.78■■■□□ 2.2
VWA3B-219ENST00000490947 CCDC180Q9P1Z9 1646 aa25.16■■□□□ 1.62
VWA3B-219ENST00000490947 ZCCHC6Q5VYS8 1495 aaKnown RBP24.26■■□□□ 1.47
VWA3B-219ENST00000490947 ABCC9O60706 1549 aa24.01■■□□□ 1.43
VWA3B-219ENST00000490947 DCAF1Q9Y4B6 1507 aa23.82■■□□□ 1.4
VWA3B-219ENST00000490947 DCAF8L2P0C7V8 631 aa23.53■■□□□ 1.36
VWA3B-219ENST00000490947 SHROOM4Q9ULL8 1493 aa23.52■■□□□ 1.36
VWA3B-219ENST00000490947 MYO15BQ96JP2 1530 aa23.47■■□□□ 1.35
VWA3B-219ENST00000490947 NACADO15069 1562 aa23.3■■□□□ 1.32
VWA3B-219ENST00000490947 SCRIBQ14160 1630 aa23.11■■□□□ 1.29
VWA3B-219ENST00000490947 RB1CC1Q8TDY2 1594 aa23.09■■□□□ 1.29
VWA3B-219ENST00000490947 DNAJC5BQ9UF47 199 aa22.75■■□□□ 1.23
VWA3B-219ENST00000490947 UNC13AQ9UPW8 1703 aa22.71■■□□□ 1.23
VWA3B-219ENST00000490947 SUPT5HO00267 1087 aaKnown RBP22.62■■□□□ 1.21
VWA3B-219ENST00000490947 PABPN1Q86U42 306 aaKnown RBP eCLIP22.4■■□□□ 1.18
VWA3B-219ENST00000490947 BICRAQ9NZM4 1560 aa22.39■■□□□ 1.17
VWA3B-219ENST00000490947 RSF1Q96T23 1441 aaPredicted RBP22.34■■□□□ 1.17
VWA3B-219ENST00000490947 CECR2Q9BXF3 1484 aa22.32■■□□□ 1.16
VWA3B-219ENST00000490947 MROH2BQ7Z745 1585 aa22.25■■□□□ 1.15
VWA3B-219ENST00000490947 BAZ1AQ9NRL2 1556 aaPredicted RBP22.24■■□□□ 1.15
VWA3B-219ENST00000490947 SMARCA4P51532 1647 aa22.16■■□□□ 1.14
VWA3B-219ENST00000490947 WIZO95785 1651 aa22.12■■□□□ 1.13
VWA3B-219ENST00000490947 TOP2AP11388 1531 aaKnown RBP21.91■■□□□ 1.1
VWA3B-219ENST00000490947 PEG3Q9GZU2 1588 aa21.87■■□□□ 1.09
VWA3B-219ENST00000490947 CHIC1Q5VXU3 224 aa21.75■■□□□ 1.07
VWA3B-219ENST00000490947 SMARCA2P51531 1590 aa21.72■■□□□ 1.07
VWA3B-219ENST00000490947 EIF4G1Q04637 1599 aaKnown RBP21.7■■□□□ 1.06
VWA3B-219ENST00000490947 ATAD2BQ9ULI0 1458 aa21.67■■□□□ 1.06
VWA3B-219ENST00000490947 CC2D2AQ9P2K1 1620 aa21.65■■□□□ 1.06
VWA3B-219ENST00000490947 BAZ1BQ9UIG0 1483 aaKnown RBP21.59■■□□□ 1.05
VWA3B-219ENST00000490947 CCDC88BA6NC98 1476 aa21.59■■□□□ 1.05
VWA3B-219ENST00000490947 HMGXB3Q12766 1538 aa21.53■■□□□ 1.04
VWA3B-219ENST00000490947 NCAPD3P42695 1498 aa21.44■■□□□ 1.02
VWA3B-219ENST00000490947 TRIM41Q8WV44 630 aa21.26■□□□□ 0.99
VWA3B-219ENST00000490947 ABCC8Q09428 1581 aa21.25■□□□□ 0.99
VWA3B-219ENST00000490947 PRDM2Q13029 1718 aa21.13■□□□□ 0.97
VWA3B-219ENST00000490947 WRNQ14191 1432 aaPredicted RBP eCLIP21.05■□□□□ 0.96
VWA3B-219ENST00000490947 SYNJ1O43426 1573 aa21.04■□□□□ 0.96
VWA3B-219ENST00000490947 CFTRP13569 1480 aa21.02■□□□□ 0.96
VWA3B-219ENST00000490947 BIVM-ERCC5R4GMW8 1640 aa20.95■□□□□ 0.94
VWA3B-219ENST00000490947 TOP2BQ02880 1626 aa20.93■□□□□ 0.94
VWA3B-219ENST00000490947 FAM9AQ8IZU1 332 aaPredicted RBP20.88■□□□□ 0.93
VWA3B-219ENST00000490947 CADPSQ9ULU8 1353 aa20.87■□□□□ 0.93
VWA3B-219ENST00000490947 LOC105371045A0A1W2PR82 267 aa20.87■□□□□ 0.93
VWA3B-219ENST00000490947 EEA1Q15075 1411 aa20.83■□□□□ 0.93
VWA3B-219ENST00000490947 DNAJC5Q9H3Z4 198 aa20.83■□□□□ 0.92
VWA3B-219ENST00000490947 CUX1P39880 1505 aa20.81■□□□□ 0.92
VWA3B-219ENST00000490947 SOGA1O94964 1423 aa20.8■□□□□ 0.92
VWA3B-219ENST00000490947 LAMC3Q9Y6N6 1575 aa20.77■□□□□ 0.92
VWA3B-219ENST00000490947 RUSC2Q8N2Y8 1516 aa20.73■□□□□ 0.91
VWA3B-219ENST00000490947 FANCD2Q9BXW9 1451 aa20.71■□□□□ 0.91
VWA3B-219ENST00000490947 NESP48681 1621 aa20.7■□□□□ 0.9
VWA3B-219ENST00000490947 KIF21BO75037 1637 aa20.64■□□□□ 0.9
VWA3B-219ENST00000490947 ERCC6Q03468 1493 aa20.64■□□□□ 0.89
VWA3B-219ENST00000490947 CUX2O14529 1486 aa20.63■□□□□ 0.89
VWA3B-219ENST00000490947 DNMBPQ6XZF7 1577 aa20.62■□□□□ 0.89
VWA3B-219ENST00000490947 GOLGA3Q08378 1498 aa20.59■□□□□ 0.89
VWA3B-219ENST00000490947 CEP164Q9UPV0 1460 aa20.59■□□□□ 0.89
VWA3B-219ENST00000490947 EHMT2Q96KQ7 1210 aa20.58■□□□□ 0.89
VWA3B-219ENST00000490947 CSRNP3Q8WYN3 585 aa20.58■□□□□ 0.88
VWA3B-219ENST00000490947 KIF21AQ7Z4S6 1674 aa20.57■□□□□ 0.88
VWA3B-219ENST00000490947 FGD5Q6ZNL6 1462 aa20.56■□□□□ 0.88
VWA3B-219ENST00000490947 TOPBP1Q92547 1522 aa20.52■□□□□ 0.88
VWA3B-219ENST00000490947 PDS5BQ9NTI5 1447 aa20.51■□□□□ 0.87
VWA3B-219ENST00000490947 KIF27Q86VH2 1401 aa20.48■□□□□ 0.87
VWA3B-219ENST00000490947 TNIKQ9UKE5 1360 aa20.47■□□□□ 0.87
VWA3B-219ENST00000490947 URB2Q14146 1524 aaKnown RBP20.46■□□□□ 0.87
VWA3B-219ENST00000490947 ERICH3Q5RHP9 1530 aa20.45■□□□□ 0.86
VWA3B-219ENST00000490947 POLA1P09884 1462 aaPredicted RBP20.42■□□□□ 0.86
VWA3B-219ENST00000490947 CEP162Q5TB80 1403 aa20.42■□□□□ 0.86
VWA3B-219ENST00000490947 WDR97A6NE52 1622 aa20.42■□□□□ 0.86
VWA3B-219ENST00000490947 PRXQ9BXM0 1461 aa20.4■□□□□ 0.86
VWA3B-219ENST00000490947 RAPGEF2Q9Y4G8 1499 aa20.4■□□□□ 0.86
VWA3B-219ENST00000490947 THOC2Q8NI27 1593 aaKnown RBP20.37■□□□□ 0.85
VWA3B-219ENST00000490947 ABCA10Q8WWZ4 1543 aa20.37■□□□□ 0.85
VWA3B-219ENST00000490947 UBTFP17480 764 aaKnown RBP20.33■□□□□ 0.85
VWA3B-219ENST00000490947 RAD54L2Q9Y4B4 1467 aa20.33■□□□□ 0.84
VWA3B-219ENST00000490947 MRC2Q9UBG0 1479 aa20.32■□□□□ 0.84
VWA3B-219ENST00000490947 ABCA5Q8WWZ7 1642 aa20.27■□□□□ 0.84
VWA3B-219ENST00000490947 CUL7Q14999 1698 aa20.25■□□□□ 0.83
VWA3B-219ENST00000490947 TARBP1Q13395 1621 aaKnown RBP20.24■□□□□ 0.83
VWA3B-219ENST00000490947 WDR62O43379 1518 aa20.24■□□□□ 0.83
VWA3B-219ENST00000490947 CLIP1P30622 1438 aa20.22■□□□□ 0.83
VWA3B-219ENST00000490947 IGF1RP08069 1367 aa20.22■□□□□ 0.83
VWA3B-219ENST00000490947 PBRM1Q86U86 1689 aa20.14■□□□□ 0.82
VWA3B-219ENST00000490947 CARMIL1Q5VZK9 1371 aa20.14■□□□□ 0.81
VWA3B-219ENST00000490947 GAPVD1Q14C86 1478 aa20.11■□□□□ 0.81
VWA3B-219ENST00000490947 PCGF6Q9BYE7 350 aa20.09■□□□□ 0.81
VWA3B-219ENST00000490947 CTTNBP2Q8WZ74 1663 aa20.09■□□□□ 0.81
VWA3B-219ENST00000490947 VPS8Q8N3P4 1428 aa20.08■□□□□ 0.8
VWA3B-219ENST00000490947 IFT140Q96RY7 1462 aa20.07■□□□□ 0.8
VWA3B-219ENST00000490947 TRIM26Q12899 539 aaPredicted RBP20.07■□□□□ 0.8
VWA3B-219ENST00000490947 TDRD9Q8NDG6 1382 aaKnown RBP20.06■□□□□ 0.8
VWA3B-219ENST00000490947 ARAP1Q96P48 1450 aa20.05■□□□□ 0.8
VWA3B-219ENST00000490947 ADAMTS12P58397 1594 aa20.01■□□□□ 0.79
VWA3B-219ENST00000490947 ARHGAP35Q9NRY4 1499 aa19.99■□□□□ 0.79
VWA3B-219ENST00000490947 EIF4G3O43432 1585 aaKnown RBP19.99■□□□□ 0.79
VWA3B-219ENST00000490947 RANGAP1P46060 587 aaPredicted RBP19.96■□□□□ 0.79
VWA3B-219ENST00000490947 GRIN2BQ13224 1484 aa19.94■□□□□ 0.78
VWA3B-219ENST00000490947 ZNF608Q9ULD9 1512 aaPredicted RBP19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms