RNA–Protein interactions for RNA: ENST00000490915.5

REEP1-206, Transcript of receptor accessory protein 1, humanhuman

TSL 4

Gene REEP1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
REEP1-206ENST00000490915 NISCHQ9Y2I1 1504 aa43.11■■■■■ 4.49
REEP1-206ENST00000490915 CCDC180Q9P1Z9 1646 aa38.53■■■■□ 3.76
REEP1-206ENST00000490915 ABCC9O60706 1549 aa38.26■■■■□ 3.72
REEP1-206ENST00000490915 RB1CC1Q8TDY2 1594 aa36.52■■■■□ 3.44
REEP1-206ENST00000490915 NACADO15069 1562 aa36.35■■■■□ 3.41
REEP1-206ENST00000490915 DCAF8L2P0C7V8 631 aa36.26■■■■□ 3.4
REEP1-206ENST00000490915 MYO15BQ96JP2 1530 aa35.93■■■■□ 3.34
REEP1-206ENST00000490915 ZCCHC6Q5VYS8 1495 aaKnown RBP35.8■■■■□ 3.32
REEP1-206ENST00000490915 UNC13AQ9UPW8 1703 aa35.77■■■■□ 3.32
REEP1-206ENST00000490915 PABPN1Q86U42 306 aaKnown RBP eCLIP35.68■■■■□ 3.3
REEP1-206ENST00000490915 DNAJC5BQ9UF47 199 aa35.63■■■■□ 3.29
REEP1-206ENST00000490915 DCAF1Q9Y4B6 1507 aa35.6■■■■□ 3.29
REEP1-206ENST00000490915 BICRAQ9NZM4 1560 aa35.49■■■■□ 3.27
REEP1-206ENST00000490915 SCRIBQ14160 1630 aa35.17■■■■□ 3.22
REEP1-206ENST00000490915 SHROOM4Q9ULL8 1493 aa34.96■■■■□ 3.19
REEP1-206ENST00000490915 CC2D2AQ9P2K1 1620 aa34.58■■■■□ 3.13
REEP1-206ENST00000490915 EIF4G1Q04637 1599 aaKnown RBP34.57■■■■□ 3.13
REEP1-206ENST00000490915 CECR2Q9BXF3 1484 aa34.41■■■■□ 3.1
REEP1-206ENST00000490915 SMARCA4P51532 1647 aa33.57■■■□□ 2.97
REEP1-206ENST00000490915 NCAPD3P42695 1498 aa33.55■■■□□ 2.96
REEP1-206ENST00000490915 ATAD2BQ9ULI0 1458 aa33.51■■■□□ 2.96
REEP1-206ENST00000490915 BAZ1AQ9NRL2 1556 aaPredicted RBP33.43■■■□□ 2.94
REEP1-206ENST00000490915 SMARCA2P51531 1590 aa33.42■■■□□ 2.94
REEP1-206ENST00000490915 HMGXB3Q12766 1538 aa33.33■■■□□ 2.93
REEP1-206ENST00000490915 MROH2BQ7Z745 1585 aa33.24■■■□□ 2.91
REEP1-206ENST00000490915 PEG3Q9GZU2 1588 aa33.23■■■□□ 2.91
REEP1-206ENST00000490915 BAZ1BQ9UIG0 1483 aaKnown RBP33.2■■■□□ 2.91
REEP1-206ENST00000490915 ERCC6Q03468 1493 aa32.99■■■□□ 2.87
REEP1-206ENST00000490915 NESP48681 1621 aa32.97■■■□□ 2.87
REEP1-206ENST00000490915 WIZO95785 1651 aa32.88■■■□□ 2.85
REEP1-206ENST00000490915 CUX2O14529 1486 aa32.8■■■□□ 2.84
REEP1-206ENST00000490915 LAMC3Q9Y6N6 1575 aa32.75■■■□□ 2.83
REEP1-206ENST00000490915 RSF1Q96T23 1441 aaPredicted RBP32.66■■■□□ 2.82
REEP1-206ENST00000490915 KIF21AQ7Z4S6 1674 aa32.57■■■□□ 2.8
REEP1-206ENST00000490915 THOC2Q8NI27 1593 aaKnown RBP32.56■■■□□ 2.8
REEP1-206ENST00000490915 CADPSQ9ULU8 1353 aa32.55■■■□□ 2.8
REEP1-206ENST00000490915 PDS5BQ9NTI5 1447 aa32.53■■■□□ 2.8
REEP1-206ENST00000490915 TOP2AP11388 1531 aaKnown RBP32.45■■■□□ 2.78
REEP1-206ENST00000490915 DNAJC5Q9H3Z4 198 aa32.43■■■□□ 2.78
REEP1-206ENST00000490915 CFTRP13569 1480 aa32.25■■■□□ 2.75
REEP1-206ENST00000490915 MRC2Q9UBG0 1479 aa32.25■■■□□ 2.75
REEP1-206ENST00000490915 FANCD2Q9BXW9 1451 aa32.19■■■□□ 2.74
REEP1-206ENST00000490915 CEP164Q9UPV0 1460 aa32.18■■■□□ 2.74
REEP1-206ENST00000490915 WDR62O43379 1518 aa32.17■■■□□ 2.74
REEP1-206ENST00000490915 CCDC88BA6NC98 1476 aa32.1■■■□□ 2.73
REEP1-206ENST00000490915 PRDM2Q13029 1718 aa31.98■■■□□ 2.71
REEP1-206ENST00000490915 URB2Q14146 1524 aaKnown RBP31.92■■■□□ 2.7
REEP1-206ENST00000490915 TOPBP1Q92547 1522 aa31.63■■■□□ 2.65
REEP1-206ENST00000490915 ABCC8Q09428 1581 aa31.53■■■□□ 2.64
REEP1-206ENST00000490915 DNMBPQ6XZF7 1577 aa31.53■■■□□ 2.64
REEP1-206ENST00000490915 IFT140Q96RY7 1462 aa31.52■■■□□ 2.64
REEP1-206ENST00000490915 ZNF608Q9ULD9 1512 aaPredicted RBP31.49■■■□□ 2.63
REEP1-206ENST00000490915 SUPT5HO00267 1087 aaKnown RBP31.46■■■□□ 2.63
REEP1-206ENST00000490915 OSCARQ8IYS5 282 aa31.36■■■□□ 2.61
REEP1-206ENST00000490915 TARBP1Q13395 1621 aaKnown RBP31.34■■■□□ 2.61
REEP1-206ENST00000490915 POLA1P09884 1462 aaPredicted RBP31.33■■■□□ 2.61
REEP1-206ENST00000490915 EIF4G3O43432 1585 aaKnown RBP31.32■■■□□ 2.6
REEP1-206ENST00000490915 AQRO60306 1485 aaKnown RBP eCLIP31.24■■■□□ 2.59
REEP1-206ENST00000490915 RAD54L2Q9Y4B4 1467 aa31.22■■■□□ 2.59
REEP1-206ENST00000490915 CUX1P39880 1505 aa31.21■■■□□ 2.59
REEP1-206ENST00000490915 SOGA1O94964 1423 aa31.17■■■□□ 2.58
REEP1-206ENST00000490915 FGD5Q6ZNL6 1462 aa31.17■■■□□ 2.58
REEP1-206ENST00000490915 TRIM41Q8WV44 630 aa31.17■■■□□ 2.58
REEP1-206ENST00000490915 TDRD9Q8NDG6 1382 aaKnown RBP31.09■■■□□ 2.57
REEP1-206ENST00000490915 CHD1O14646 1710 aa31.04■■■□□ 2.56
REEP1-206ENST00000490915 WDR97A6NE52 1622 aa30.98■■■□□ 2.55
REEP1-206ENST00000490915 RIMBP3CA6NJZ7 1639 aa30.95■■■□□ 2.55
REEP1-206ENST00000490915 RIMBP3BA6NNM3 1639 aa30.95■■■□□ 2.55
REEP1-206ENST00000490915 RIMBP3Q9UFD9 1639 aa30.95■■■□□ 2.55
REEP1-206ENST00000490915 FBLN2P98095 1184 aa30.95■■■□□ 2.55
REEP1-206ENST00000490915 SNAPC4Q5SXM2 1469 aa30.92■■■□□ 2.54
REEP1-206ENST00000490915 ARHGEF11O15085 1522 aa30.88■■■□□ 2.53
REEP1-206ENST00000490915 GRIN2BQ13224 1484 aa30.86■■■□□ 2.53
REEP1-206ENST00000490915 ABCA10Q8WWZ4 1543 aa30.83■■■□□ 2.53
REEP1-206ENST00000490915 MAGI1Q96QZ7 1491 aaPredicted RBP30.82■■■□□ 2.53
REEP1-206ENST00000490915 GAPVD1Q14C86 1478 aa30.81■■■□□ 2.52
REEP1-206ENST00000490915 PBRM1Q86U86 1689 aa30.81■■■□□ 2.52
REEP1-206ENST00000490915 BIVM-ERCC5R4GMW8 1640 aa30.79■■■□□ 2.52
REEP1-206ENST00000490915 WRNQ14191 1432 aaPredicted RBP eCLIP30.79■■■□□ 2.52
REEP1-206ENST00000490915 SYNJ1O43426 1573 aa30.79■■■□□ 2.52
REEP1-206ENST00000490915 TOP2BQ02880 1626 aa30.78■■■□□ 2.52
REEP1-206ENST00000490915 ABCA5Q8WWZ7 1642 aa30.77■■■□□ 2.52
REEP1-206ENST00000490915 CHMP7Q8WUX9 453 aaPredicted RBP30.76■■■□□ 2.51
REEP1-206ENST00000490915 SYNJ2O15056 1496 aa30.73■■■□□ 2.51
REEP1-206ENST00000490915 CLASP1Q7Z460 1538 aa30.68■■■□□ 2.5
REEP1-206ENST00000490915 CYB5RLQ6IPT4 315 aa30.63■■■□□ 2.49
REEP1-206ENST00000490915 ARAP1Q96P48 1450 aa30.6■■■□□ 2.49
REEP1-206ENST00000490915 ADAMTS12P58397 1594 aa30.51■■■□□ 2.47
REEP1-206ENST00000490915 GRIN2AQ12879 1464 aa30.48■■■□□ 2.47
REEP1-206ENST00000490915 ERICH3Q5RHP9 1530 aa30.44■■■□□ 2.46
REEP1-206ENST00000490915 FHAD1B1AJZ9 1412 aa30.41■■■□□ 2.46
REEP1-206ENST00000490915 CEP170Q5SW79 1584 aa30.37■■■□□ 2.45
REEP1-206ENST00000490915 NUP160Q12769 1436 aa30.36■■■□□ 2.45
REEP1-206ENST00000490915 ERCC6L2Q5T890 1561 aa30.26■■■□□ 2.43
REEP1-206ENST00000490915 SHROOM2Q13796 1616 aa30.2■■■□□ 2.43
REEP1-206ENST00000490915 KIF27Q86VH2 1401 aa30.17■■■□□ 2.42
REEP1-206ENST00000490915 TRHP20396 242 aaPredicted RBP30.17■■■□□ 2.42
REEP1-206ENST00000490915 IGF1RP08069 1367 aa30.15■■■□□ 2.42
REEP1-206ENST00000490915 RUSC2Q8N2Y8 1516 aa30.08■■■□□ 2.41
REEP1-206ENST00000490915 CUL7Q14999 1698 aa30.07■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms