RNA–Protein interactions for RNA: ENST00000490909.1

PCOLCE-209, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 318 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-209ENST00000490909 NISCHQ9Y2I1 1504 aa21.67■■□□□ 1.06
PCOLCE-209ENST00000490909 CCDC180Q9P1Z9 1646 aa19.58■□□□□ 0.73
PCOLCE-209ENST00000490909 ABCC9O60706 1549 aa19.55■□□□□ 0.72
PCOLCE-209ENST00000490909 RB1CC1Q8TDY2 1594 aa18.58■□□□□ 0.56
PCOLCE-209ENST00000490909 NACADO15069 1562 aa18.42■□□□□ 0.54
PCOLCE-209ENST00000490909 DNAJC5BQ9UF47 199 aa18.36■□□□□ 0.53
PCOLCE-209ENST00000490909 UNC13AQ9UPW8 1703 aa18.35■□□□□ 0.53
PCOLCE-209ENST00000490909 MYO15BQ96JP2 1530 aa18.16■□□□□ 0.5
PCOLCE-209ENST00000490909 BICRAQ9NZM4 1560 aa18.15■□□□□ 0.5
PCOLCE-209ENST00000490909 PABPN1Q86U42 306 aaKnown RBP eCLIP18.08■□□□□ 0.48
PCOLCE-209ENST00000490909 DCAF8L2P0C7V8 631 aa18.05■□□□□ 0.48
PCOLCE-209ENST00000490909 ZCCHC6Q5VYS8 1495 aaKnown RBP18.01■□□□□ 0.47
PCOLCE-209ENST00000490909 DCAF1Q9Y4B6 1507 aa17.91■□□□□ 0.46
PCOLCE-209ENST00000490909 SCRIBQ14160 1630 aa17.82■□□□□ 0.44
PCOLCE-209ENST00000490909 SHROOM4Q9ULL8 1493 aa17.82■□□□□ 0.44
PCOLCE-209ENST00000490909 CC2D2AQ9P2K1 1620 aa17.71■□□□□ 0.43
PCOLCE-209ENST00000490909 EIF4G1Q04637 1599 aaKnown RBP17.66■□□□□ 0.42
PCOLCE-209ENST00000490909 CECR2Q9BXF3 1484 aa17.6■□□□□ 0.41
PCOLCE-209ENST00000490909 SMARCA4P51532 1647 aa16.99■□□□□ 0.31
PCOLCE-209ENST00000490909 NCAPD3P42695 1498 aa16.98■□□□□ 0.31
PCOLCE-209ENST00000490909 ATAD2BQ9ULI0 1458 aa16.94■□□□□ 0.3
PCOLCE-209ENST00000490909 DNAJC5Q9H3Z4 198 aa16.94■□□□□ 0.3
PCOLCE-209ENST00000490909 HMGXB3Q12766 1538 aa16.94■□□□□ 0.3
PCOLCE-209ENST00000490909 SMARCA2P51531 1590 aa16.89■□□□□ 0.3
PCOLCE-209ENST00000490909 CUX2O14529 1486 aa16.87■□□□□ 0.29
PCOLCE-209ENST00000490909 ERCC6Q03468 1493 aa16.83■□□□□ 0.28
PCOLCE-209ENST00000490909 PEG3Q9GZU2 1588 aa16.83■□□□□ 0.28
PCOLCE-209ENST00000490909 BAZ1AQ9NRL2 1556 aaPredicted RBP16.83■□□□□ 0.28
PCOLCE-209ENST00000490909 NESP48681 1621 aa16.81■□□□□ 0.28
PCOLCE-209ENST00000490909 BAZ1BQ9UIG0 1483 aaKnown RBP16.77■□□□□ 0.28
PCOLCE-209ENST00000490909 THOC2Q8NI27 1593 aaKnown RBP16.76■□□□□ 0.27
PCOLCE-209ENST00000490909 MROH2BQ7Z745 1585 aa16.72■□□□□ 0.27
PCOLCE-209ENST00000490909 KIF21AQ7Z4S6 1674 aa16.69■□□□□ 0.26
PCOLCE-209ENST00000490909 LAMC3Q9Y6N6 1575 aa16.66■□□□□ 0.26
PCOLCE-209ENST00000490909 WIZO95785 1651 aa16.56■□□□□ 0.24
PCOLCE-209ENST00000490909 PDS5BQ9NTI5 1447 aa16.45■□□□□ 0.22
PCOLCE-209ENST00000490909 WDR62O43379 1518 aa16.45■□□□□ 0.22
PCOLCE-209ENST00000490909 MRC2Q9UBG0 1479 aa16.42■□□□□ 0.22
PCOLCE-209ENST00000490909 CADPSQ9ULU8 1353 aa16.41■□□□□ 0.22
PCOLCE-209ENST00000490909 TOP2AP11388 1531 aaKnown RBP16.32■□□□□ 0.2
PCOLCE-209ENST00000490909 CEP164Q9UPV0 1460 aa16.32■□□□□ 0.2
PCOLCE-209ENST00000490909 RSF1Q96T23 1441 aaPredicted RBP16.29■□□□□ 0.2
PCOLCE-209ENST00000490909 FANCD2Q9BXW9 1451 aa16.29■□□□□ 0.2
PCOLCE-209ENST00000490909 PRDM2Q13029 1718 aa16.28■□□□□ 0.2
PCOLCE-209ENST00000490909 CFTRP13569 1480 aa16.28■□□□□ 0.2
PCOLCE-209ENST00000490909 URB2Q14146 1524 aaKnown RBP16.22■□□□□ 0.19
PCOLCE-209ENST00000490909 CCDC88BA6NC98 1476 aa16.06■□□□□ 0.16
PCOLCE-209ENST00000490909 TRIM41Q8WV44 630 aa16.04■□□□□ 0.16
PCOLCE-209ENST00000490909 ZNF608Q9ULD9 1512 aaPredicted RBP16.02■□□□□ 0.15
PCOLCE-209ENST00000490909 EIF4G3O43432 1585 aaKnown RBP16■□□□□ 0.15
PCOLCE-209ENST00000490909 TOPBP1Q92547 1522 aa16■□□□□ 0.15
PCOLCE-209ENST00000490909 RIMBP3CA6NJZ7 1639 aa15.97■□□□□ 0.15
PCOLCE-209ENST00000490909 RIMBP3BA6NNM3 1639 aa15.97■□□□□ 0.15
PCOLCE-209ENST00000490909 RIMBP3Q9UFD9 1639 aa15.97■□□□□ 0.15
PCOLCE-209ENST00000490909 IFT140Q96RY7 1462 aa15.97■□□□□ 0.15
PCOLCE-209ENST00000490909 DNMBPQ6XZF7 1577 aa15.96■□□□□ 0.15
PCOLCE-209ENST00000490909 TARBP1Q13395 1621 aaKnown RBP15.94■□□□□ 0.14
PCOLCE-209ENST00000490909 CHD1O14646 1710 aa15.92■□□□□ 0.14
PCOLCE-209ENST00000490909 OSCARQ8IYS5 282 aa15.91■□□□□ 0.14
PCOLCE-209ENST00000490909 ARHGEF11O15085 1522 aa15.88■□□□□ 0.13
PCOLCE-209ENST00000490909 ABCC8Q09428 1581 aa15.85■□□□□ 0.13
PCOLCE-209ENST00000490909 POLA1P09884 1462 aaPredicted RBP15.84■□□□□ 0.13
PCOLCE-209ENST00000490909 AQRO60306 1485 aaKnown RBP eCLIP15.79■□□□□ 0.128e-7■■■□□ 16.1
PCOLCE-209ENST00000490909 WDR97A6NE52 1622 aa15.76■□□□□ 0.11
PCOLCE-209ENST00000490909 RAD54L2Q9Y4B4 1467 aa15.76■□□□□ 0.11
PCOLCE-209ENST00000490909 CUX1P39880 1505 aa15.73■□□□□ 0.11
PCOLCE-209ENST00000490909 ARAP1Q96P48 1450 aa15.73■□□□□ 0.11
PCOLCE-209ENST00000490909 FGD5Q6ZNL6 1462 aa15.72■□□□□ 0.11
PCOLCE-209ENST00000490909 CLASP1Q7Z460 1538 aa15.7■□□□□ 0.1
PCOLCE-209ENST00000490909 SNAPC4Q5SXM2 1469 aa15.69■□□□□ 0.1
PCOLCE-209ENST00000490909 PBRM1Q86U86 1689 aa15.67■□□□□ 0.1
PCOLCE-209ENST00000490909 TDRD9Q8NDG6 1382 aaKnown RBP15.65■□□□□ 0.1
PCOLCE-209ENST00000490909 SOGA1O94964 1423 aa15.65■□□□□ 0.1
PCOLCE-209ENST00000490909 ABCA5Q8WWZ7 1642 aa15.62■□□□□ 0.09
PCOLCE-209ENST00000490909 MAGI1Q96QZ7 1491 aaPredicted RBP15.62■□□□□ 0.09
PCOLCE-209ENST00000490909 SYNJ1O43426 1573 aa15.6■□□□□ 0.09
PCOLCE-209ENST00000490909 GRIN2BQ13224 1484 aa15.58■□□□□ 0.08
PCOLCE-209ENST00000490909 CYB5RLQ6IPT4 315 aa15.56■□□□□ 0.08
PCOLCE-209ENST00000490909 SYNJ2O15056 1496 aa15.56■□□□□ 0.08
PCOLCE-209ENST00000490909 FBLN2P98095 1184 aa15.55■□□□□ 0.08
PCOLCE-209ENST00000490909 ABCA10Q8WWZ4 1543 aa15.53■□□□□ 0.08
PCOLCE-209ENST00000490909 GAPVD1Q14C86 1478 aa15.52■□□□□ 0.07
PCOLCE-209ENST00000490909 BIVM-ERCC5R4GMW8 1640 aa15.5■□□□□ 0.07
PCOLCE-209ENST00000490909 ADAMTS12P58397 1594 aa15.5■□□□□ 0.07
PCOLCE-209ENST00000490909 TOP2BQ02880 1626 aa15.46■□□□□ 0.07
PCOLCE-209ENST00000490909 ERCC6L2Q5T890 1561 aa15.46■□□□□ 0.07
PCOLCE-209ENST00000490909 CEP170Q5SW79 1584 aa15.45■□□□□ 0.06
PCOLCE-209ENST00000490909 CHMP7Q8WUX9 453 aaPredicted RBP15.43■□□□□ 0.06
PCOLCE-209ENST00000490909 GRIN2AQ12879 1464 aa15.43■□□□□ 0.06
PCOLCE-209ENST00000490909 SHROOM2Q13796 1616 aa15.41■□□□□ 0.06
PCOLCE-209ENST00000490909 NUP160Q12769 1436 aa15.38■□□□□ 0.05
PCOLCE-209ENST00000490909 TRHP20396 242 aaPredicted RBP15.38■□□□□ 0.05
PCOLCE-209ENST00000490909 WRNQ14191 1432 aaPredicted RBP eCLIP15.36■□□□□ 0.05
PCOLCE-209ENST00000490909 SUPT5HO00267 1087 aaKnown RBP15.34■□□□□ 0.05
PCOLCE-209ENST00000490909 ERICH3Q5RHP9 1530 aa15.33■□□□□ 0.05
PCOLCE-209ENST00000490909 FHAD1B1AJZ9 1412 aa15.3■□□□□ 0.04
PCOLCE-209ENST00000490909 RUSC2Q8N2Y8 1516 aa15.3■□□□□ 0.04
PCOLCE-209ENST00000490909 KIF13AQ9H1H9 1805 aa15.27■□□□□ 0.04
PCOLCE-209ENST00000490909 PRG4Q92954 1404 aaPredicted RBP15.17■□□□□ 0.02
PCOLCE-209ENST00000490909 ADCY10Q96PN6 1610 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms