RNA–Protein interactions for RNA: ENST00000490752.1

AGAP4-204, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 4, humanhuman

TSL 5

Gene AGAP4, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP4-204ENST00000490752 NISCHQ9Y2I1 1504 aa40.36■■■■■ 4.05
AGAP4-204ENST00000490752 ABCC9O60706 1549 aa36.37■■■■□ 3.41
AGAP4-204ENST00000490752 CCDC180Q9P1Z9 1646 aa36.36■■■■□ 3.41
AGAP4-204ENST00000490752 RB1CC1Q8TDY2 1594 aa34.6■■■■□ 3.13
AGAP4-204ENST00000490752 NACADO15069 1562 aa34.32■■■■□ 3.08
AGAP4-204ENST00000490752 DNAJC5BQ9UF47 199 aa34.12■■■■□ 3.05
AGAP4-204ENST00000490752 DCAF8L2P0C7V8 631 aa34.01■■■■□ 3.03
AGAP4-204ENST00000490752 UNC13AQ9UPW8 1703 aa33.94■■■■□ 3.02
AGAP4-204ENST00000490752 MYO15BQ96JP2 1530 aa33.79■■■■□ 3
AGAP4-204ENST00000490752 PABPN1Q86U42 306 aaKnown RBP eCLIP33.77■■■■□ 3
AGAP4-204ENST00000490752 BICRAQ9NZM4 1560 aa33.61■■■□□ 2.97
AGAP4-204ENST00000490752 ZCCHC6Q5VYS8 1495 aaKnown RBP33.45■■■□□ 2.95
AGAP4-204ENST00000490752 DCAF1Q9Y4B6 1507 aa33.33■■■□□ 2.93
AGAP4-204ENST00000490752 SHROOM4Q9ULL8 1493 aa33.12■■■□□ 2.89
AGAP4-204ENST00000490752 SCRIBQ14160 1630 aa33.1■■■□□ 2.89
AGAP4-204ENST00000490752 CC2D2AQ9P2K1 1620 aa32.88■■■□□ 2.85
AGAP4-204ENST00000490752 EIF4G1Q04637 1599 aaKnown RBP32.79■■■□□ 2.84
AGAP4-204ENST00000490752 CECR2Q9BXF3 1484 aa32.76■■■□□ 2.84
AGAP4-204ENST00000490752 NCAPD3P42695 1498 aa31.64■■■□□ 2.66
AGAP4-204ENST00000490752 DNAJC5Q9H3Z4 198 aa31.63■■■□□ 2.65
AGAP4-204ENST00000490752 SMARCA4P51532 1647 aa31.56■■■□□ 2.64
AGAP4-204ENST00000490752 ATAD2BQ9ULI0 1458 aa31.55■■■□□ 2.64
AGAP4-204ENST00000490752 SMARCA2P51531 1590 aa31.49■■■□□ 2.63
AGAP4-204ENST00000490752 HMGXB3Q12766 1538 aa31.46■■■□□ 2.63
AGAP4-204ENST00000490752 ERCC6Q03468 1493 aa31.4■■■□□ 2.62
AGAP4-204ENST00000490752 CUX2O14529 1486 aa31.38■■■□□ 2.61
AGAP4-204ENST00000490752 BAZ1AQ9NRL2 1556 aaPredicted RBP31.35■■■□□ 2.61
AGAP4-204ENST00000490752 BAZ1BQ9UIG0 1483 aaKnown RBP31.26■■■□□ 2.59
AGAP4-204ENST00000490752 PEG3Q9GZU2 1588 aa31.23■■■□□ 2.59
AGAP4-204ENST00000490752 NESP48681 1621 aa31.22■■■□□ 2.59
AGAP4-204ENST00000490752 MROH2BQ7Z745 1585 aa31.11■■■□□ 2.57
AGAP4-204ENST00000490752 LAMC3Q9Y6N6 1575 aa31■■■□□ 2.55
AGAP4-204ENST00000490752 THOC2Q8NI27 1593 aaKnown RBP31■■■□□ 2.55
AGAP4-204ENST00000490752 KIF21AQ7Z4S6 1674 aa30.91■■■□□ 2.54
AGAP4-204ENST00000490752 WIZO95785 1651 aa30.78■■■□□ 2.52
AGAP4-204ENST00000490752 PDS5BQ9NTI5 1447 aa30.76■■■□□ 2.51
AGAP4-204ENST00000490752 CADPSQ9ULU8 1353 aa30.66■■■□□ 2.5
AGAP4-204ENST00000490752 MRC2Q9UBG0 1479 aa30.55■■■□□ 2.48
AGAP4-204ENST00000490752 WDR62O43379 1518 aa30.51■■■□□ 2.47
AGAP4-204ENST00000490752 CEP164Q9UPV0 1460 aa30.42■■■□□ 2.46
AGAP4-204ENST00000490752 RSF1Q96T23 1441 aaPredicted RBP30.38■■■□□ 2.45
AGAP4-204ENST00000490752 TOP2AP11388 1531 aaKnown RBP30.37■■■□□ 2.45
AGAP4-204ENST00000490752 FANCD2Q9BXW9 1451 aa30.35■■■□□ 2.45
AGAP4-204ENST00000490752 CFTRP13569 1480 aa30.31■■■□□ 2.44
AGAP4-204ENST00000490752 PRDM2Q13029 1718 aa30.19■■■□□ 2.42
AGAP4-204ENST00000490752 TRIM41Q8WV44 630 aa30.15■■■□□ 2.42
AGAP4-204ENST00000490752 URB2Q14146 1524 aaKnown RBP30.13■■■□□ 2.41
AGAP4-204ENST00000490752 CCDC88BA6NC98 1476 aa29.96■■■□□ 2.39
AGAP4-204ENST00000490752 OSCARQ8IYS5 282 aa29.84■■■□□ 2.37
AGAP4-204ENST00000490752 IFT140Q96RY7 1462 aa29.79■■■□□ 2.36
AGAP4-204ENST00000490752 TOPBP1Q92547 1522 aa29.78■■■□□ 2.36
AGAP4-204ENST00000490752 ZNF608Q9ULD9 1512 aaPredicted RBP29.76■■■□□ 2.36
AGAP4-204ENST00000490752 DNMBPQ6XZF7 1577 aa29.69■■■□□ 2.34
AGAP4-204ENST00000490752 ABCC8Q09428 1581 aa29.68■■■□□ 2.34
AGAP4-204ENST00000490752 EIF4G3O43432 1585 aaKnown RBP29.67■■■□□ 2.34
AGAP4-204ENST00000490752 RIMBP3CA6NJZ7 1639 aa29.62■■■□□ 2.33
AGAP4-204ENST00000490752 RIMBP3BA6NNM3 1639 aa29.62■■■□□ 2.33
AGAP4-204ENST00000490752 RIMBP3Q9UFD9 1639 aa29.62■■■□□ 2.33
AGAP4-204ENST00000490752 TARBP1Q13395 1621 aaKnown RBP29.56■■■□□ 2.32
AGAP4-204ENST00000490752 CHD1O14646 1710 aa29.51■■■□□ 2.31
AGAP4-204ENST00000490752 ARHGEF11O15085 1522 aa29.48■■■□□ 2.31
AGAP4-204ENST00000490752 POLA1P09884 1462 aaPredicted RBP29.48■■■□□ 2.31
AGAP4-204ENST00000490752 AQRO60306 1485 aaKnown RBP eCLIP29.45■■■□□ 2.31
AGAP4-204ENST00000490752 RAD54L2Q9Y4B4 1467 aa29.35■■■□□ 2.29
AGAP4-204ENST00000490752 FGD5Q6ZNL6 1462 aa29.28■■■□□ 2.28
AGAP4-204ENST00000490752 SOGA1O94964 1423 aa29.28■■■□□ 2.28
AGAP4-204ENST00000490752 WDR97A6NE52 1622 aa29.25■■■□□ 2.27
AGAP4-204ENST00000490752 FBLN2P98095 1184 aa29.24■■■□□ 2.27
AGAP4-204ENST00000490752 CUX1P39880 1505 aa29.24■■■□□ 2.27
AGAP4-204ENST00000490752 TDRD9Q8NDG6 1382 aaKnown RBP29.24■■■□□ 2.27
AGAP4-204ENST00000490752 SNAPC4Q5SXM2 1469 aa29.19■■■□□ 2.26
AGAP4-204ENST00000490752 ARAP1Q96P48 1450 aa29.17■■■□□ 2.26
AGAP4-204ENST00000490752 CYB5RLQ6IPT4 315 aa29.17■■■□□ 2.26
AGAP4-204ENST00000490752 MAGI1Q96QZ7 1491 aaPredicted RBP29.1■■■□□ 2.25
AGAP4-204ENST00000490752 CLASP1Q7Z460 1538 aa29.1■■■□□ 2.25
AGAP4-204ENST00000490752 PBRM1Q86U86 1689 aa29.08■■■□□ 2.25
AGAP4-204ENST00000490752 SYNJ1O43426 1573 aa29.07■■■□□ 2.24
AGAP4-204ENST00000490752 GRIN2BQ13224 1484 aa29.07■■■□□ 2.24
AGAP4-204ENST00000490752 SYNJ2O15056 1496 aa29■■■□□ 2.23
AGAP4-204ENST00000490752 CHMP7Q8WUX9 453 aaPredicted RBP29■■■□□ 2.23
AGAP4-204ENST00000490752 ABCA5Q8WWZ7 1642 aa28.96■■■□□ 2.23
AGAP4-204ENST00000490752 GAPVD1Q14C86 1478 aa28.96■■■□□ 2.23
AGAP4-204ENST00000490752 ABCA10Q8WWZ4 1543 aa28.93■■■□□ 2.22
AGAP4-204ENST00000490752 SUPT5HO00267 1087 aaKnown RBP28.92■■■□□ 2.22
AGAP4-204ENST00000490752 TRHP20396 242 aaPredicted RBP28.88■■■□□ 2.21
AGAP4-204ENST00000490752 BIVM-ERCC5R4GMW8 1640 aa28.8■■■□□ 2.2
AGAP4-204ENST00000490752 TOP2BQ02880 1626 aa28.76■■■□□ 2.2
AGAP4-204ENST00000490752 WRNQ14191 1432 aaPredicted RBP eCLIP28.75■■■□□ 2.19
AGAP4-204ENST00000490752 ADAMTS12P58397 1594 aa28.75■■■□□ 2.19
AGAP4-204ENST00000490752 GRIN2AQ12879 1464 aa28.72■■■□□ 2.19
AGAP4-204ENST00000490752 CEP170Q5SW79 1584 aa28.66■■■□□ 2.18
AGAP4-204ENST00000490752 ERCC6L2Q5T890 1561 aa28.64■■■□□ 2.18
AGAP4-204ENST00000490752 NUP160Q12769 1436 aa28.61■■■□□ 2.17
AGAP4-204ENST00000490752 FHAD1B1AJZ9 1412 aa28.58■■■□□ 2.17
AGAP4-204ENST00000490752 ERICH3Q5RHP9 1530 aa28.57■■■□□ 2.16
AGAP4-204ENST00000490752 SHROOM2Q13796 1616 aa28.56■■■□□ 2.16
AGAP4-204ENST00000490752 RUSC2Q8N2Y8 1516 aa28.36■■■□□ 2.13
AGAP4-204ENST00000490752 AEBP2Q6ZN18 517 aaPredicted RBP28.34■■■□□ 2.13
AGAP4-204ENST00000490752 PRG4Q92954 1404 aaPredicted RBP28.32■■■□□ 2.12
AGAP4-204ENST00000490752 KIF13AQ9H1H9 1805 aa28.28■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 163.6 ms