RNA–Protein interactions for RNA: ENST00000490742.5

LST1-221, leukocyte specific transcript 1, humanhuman

TSL 5

Gene LST1, Length 273 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LST1-221ENST00000490742 NISCHQ9Y2I1 1504 aa36.32■■■■□ 3.4
LST1-221ENST00000490742 CCDC180Q9P1Z9 1646 aa32.33■■■□□ 2.77
LST1-221ENST00000490742 ABCC9O60706 1549 aa31.43■■■□□ 2.62
LST1-221ENST00000490742 RB1CC1Q8TDY2 1594 aa30.3■■■□□ 2.44
LST1-221ENST00000490742 ZCCHC6Q5VYS8 1495 aaKnown RBP30.3■■■□□ 2.44
LST1-221ENST00000490742 NACADO15069 1562 aa30.28■■■□□ 2.44
LST1-221ENST00000490742 DCAF8L2P0C7V8 631 aa30.21■■■□□ 2.43
LST1-221ENST00000490742 MYO15BQ96JP2 1530 aa30.09■■■□□ 2.41
LST1-221ENST00000490742 DCAF1Q9Y4B6 1507 aa30.03■■■□□ 2.4
LST1-221ENST00000490742 UNC13AQ9UPW8 1703 aa29.84■■■□□ 2.37
LST1-221ENST00000490742 SCRIBQ14160 1630 aa29.52■■■□□ 2.32
LST1-221ENST00000490742 BICRAQ9NZM4 1560 aa29.43■■■□□ 2.3
LST1-221ENST00000490742 PABPN1Q86U42 306 aaKnown RBP eCLIP29.32■■■□□ 2.28
LST1-221ENST00000490742 SHROOM4Q9ULL8 1493 aa29.01■■■□□ 2.23
LST1-221ENST00000490742 DNAJC5BQ9UF47 199 aa28.66■■■□□ 2.18
LST1-221ENST00000490742 EIF4G1Q04637 1599 aaKnown RBP28.61■■■□□ 2.17
LST1-221ENST00000490742 CC2D2AQ9P2K1 1620 aa28.49■■■□□ 2.15
LST1-221ENST00000490742 CECR2Q9BXF3 1484 aa28.29■■■□□ 2.12
LST1-221ENST00000490742 SMARCA4P51532 1647 aa28.22■■■□□ 2.11
LST1-221ENST00000490742 BAZ1AQ9NRL2 1556 aaPredicted RBP28.15■■■□□ 2.1
LST1-221ENST00000490742 MROH2BQ7Z745 1585 aa28.03■■■□□ 2.08
LST1-221ENST00000490742 SMARCA2P51531 1590 aa27.95■■■□□ 2.07
LST1-221ENST00000490742 ATAD2BQ9ULI0 1458 aa27.95■■■□□ 2.06
LST1-221ENST00000490742 PEG3Q9GZU2 1588 aa27.9■■■□□ 2.06
LST1-221ENST00000490742 NCAPD3P42695 1498 aa27.88■■■□□ 2.05
LST1-221ENST00000490742 HMGXB3Q12766 1538 aa27.82■■■□□ 2.04
LST1-221ENST00000490742 WIZO95785 1651 aa27.81■■■□□ 2.04
LST1-221ENST00000490742 BAZ1BQ9UIG0 1483 aaKnown RBP27.74■■■□□ 2.03
LST1-221ENST00000490742 RSF1Q96T23 1441 aaPredicted RBP27.68■■■□□ 2.02
LST1-221ENST00000490742 TOP2AP11388 1531 aaKnown RBP27.45■■□□□ 1.98
LST1-221ENST00000490742 NESP48681 1621 aa27.26■■□□□ 1.95
LST1-221ENST00000490742 LAMC3Q9Y6N6 1575 aa27.2■■□□□ 1.94
LST1-221ENST00000490742 CCDC88BA6NC98 1476 aa27.08■■□□□ 1.93
LST1-221ENST00000490742 SUPT5HO00267 1087 aaKnown RBP27.07■■□□□ 1.92
LST1-221ENST00000490742 KIF21AQ7Z4S6 1674 aa27.07■■□□□ 1.92
LST1-221ENST00000490742 CADPSQ9ULU8 1353 aa27.06■■□□□ 1.92
LST1-221ENST00000490742 ERCC6Q03468 1493 aa27.06■■□□□ 1.92
LST1-221ENST00000490742 PRDM2Q13029 1718 aa27.02■■□□□ 1.92
LST1-221ENST00000490742 CFTRP13569 1480 aa26.95■■□□□ 1.91
LST1-221ENST00000490742 PDS5BQ9NTI5 1447 aa26.92■■□□□ 1.9
LST1-221ENST00000490742 THOC2Q8NI27 1593 aaKnown RBP26.88■■□□□ 1.89
LST1-221ENST00000490742 FANCD2Q9BXW9 1451 aa26.81■■□□□ 1.88
LST1-221ENST00000490742 CEP164Q9UPV0 1460 aa26.77■■□□□ 1.88
LST1-221ENST00000490742 CUX2O14529 1486 aa26.71■■□□□ 1.87
LST1-221ENST00000490742 MRC2Q9UBG0 1479 aa26.69■■□□□ 1.86
LST1-221ENST00000490742 WDR62O43379 1518 aa26.64■■□□□ 1.85
LST1-221ENST00000490742 URB2Q14146 1524 aaKnown RBP26.56■■□□□ 1.84
LST1-221ENST00000490742 DNMBPQ6XZF7 1577 aa26.42■■□□□ 1.82
LST1-221ENST00000490742 TOPBP1Q92547 1522 aa26.42■■□□□ 1.82
LST1-221ENST00000490742 ABCC8Q09428 1581 aa26.36■■□□□ 1.81
LST1-221ENST00000490742 CUX1P39880 1505 aa26.29■■□□□ 1.8
LST1-221ENST00000490742 POLA1P09884 1462 aaPredicted RBP26.19■■□□□ 1.78
LST1-221ENST00000490742 TARBP1Q13395 1621 aaKnown RBP26.17■■□□□ 1.78
LST1-221ENST00000490742 IFT140Q96RY7 1462 aa26.17■■□□□ 1.78
LST1-221ENST00000490742 BIVM-ERCC5R4GMW8 1640 aa26.16■■□□□ 1.78
LST1-221ENST00000490742 FGD5Q6ZNL6 1462 aa26.16■■□□□ 1.78
LST1-221ENST00000490742 SYNJ1O43426 1573 aa26.14■■□□□ 1.78
LST1-221ENST00000490742 TOP2BQ02880 1626 aa26.11■■□□□ 1.77
LST1-221ENST00000490742 WRNQ14191 1432 aaPredicted RBP eCLIP26.1■■□□□ 1.77
LST1-221ENST00000490742 ZNF608Q9ULD9 1512 aaPredicted RBP26.09■■□□□ 1.77
LST1-221ENST00000490742 RAD54L2Q9Y4B4 1467 aa26.08■■□□□ 1.77
LST1-221ENST00000490742 WDR97A6NE52 1622 aa26.07■■□□□ 1.76
LST1-221ENST00000490742 EIF4G3O43432 1585 aaKnown RBP26.07■■□□□ 1.76
LST1-221ENST00000490742 SOGA1O94964 1423 aa26.04■■□□□ 1.76
LST1-221ENST00000490742 AQRO60306 1485 aaKnown RBP eCLIP25.92■■□□□ 1.74
LST1-221ENST00000490742 ABCA10Q8WWZ4 1543 aa25.89■■□□□ 1.74
LST1-221ENST00000490742 PBRM1Q86U86 1689 aa25.89■■□□□ 1.73
LST1-221ENST00000490742 TDRD9Q8NDG6 1382 aaKnown RBP25.88■■□□□ 1.73
LST1-221ENST00000490742 ABCA5Q8WWZ7 1642 aa25.86■■□□□ 1.73
LST1-221ENST00000490742 CHD1O14646 1710 aa25.8■■□□□ 1.72
LST1-221ENST00000490742 GAPVD1Q14C86 1478 aa25.77■■□□□ 1.72
LST1-221ENST00000490742 GRIN2BQ13224 1484 aa25.73■■□□□ 1.71
LST1-221ENST00000490742 SNAPC4Q5SXM2 1469 aa25.72■■□□□ 1.71
LST1-221ENST00000490742 MAGI1Q96QZ7 1491 aaPredicted RBP25.66■■□□□ 1.7
LST1-221ENST00000490742 DNAJC5Q9H3Z4 198 aa25.66■■□□□ 1.7
LST1-221ENST00000490742 ERICH3Q5RHP9 1530 aa25.59■■□□□ 1.69
LST1-221ENST00000490742 ADAMTS12P58397 1594 aa25.59■■□□□ 1.69
LST1-221ENST00000490742 SYNJ2O15056 1496 aa25.56■■□□□ 1.68
LST1-221ENST00000490742 FBLN2P98095 1184 aa25.54■■□□□ 1.68
LST1-221ENST00000490742 OSCARQ8IYS5 282 aa25.54■■□□□ 1.68
LST1-221ENST00000490742 KIF27Q86VH2 1401 aa25.53■■□□□ 1.68
LST1-221ENST00000490742 TRIM41Q8WV44 630 aa25.52■■□□□ 1.68
LST1-221ENST00000490742 CHMP7Q8WUX9 453 aaPredicted RBP25.47■■□□□ 1.67
LST1-221ENST00000490742 CUL7Q14999 1698 aa25.45■■□□□ 1.67
LST1-221ENST00000490742 FHAD1B1AJZ9 1412 aa25.45■■□□□ 1.66
LST1-221ENST00000490742 GRIN2AQ12879 1464 aa25.43■■□□□ 1.66
LST1-221ENST00000490742 RUSC2Q8N2Y8 1516 aa25.41■■□□□ 1.66
LST1-221ENST00000490742 CLASP1Q7Z460 1538 aa25.39■■□□□ 1.66
LST1-221ENST00000490742 IGF1RP08069 1367 aa25.39■■□□□ 1.65
LST1-221ENST00000490742 CEP170Q5SW79 1584 aa25.35■■□□□ 1.65
LST1-221ENST00000490742 CHIC1Q5VXU3 224 aa25.32■■□□□ 1.64
LST1-221ENST00000490742 RIMBP3CA6NJZ7 1639 aa25.3■■□□□ 1.64
LST1-221ENST00000490742 RIMBP3BA6NNM3 1639 aa25.3■■□□□ 1.64
LST1-221ENST00000490742 RIMBP3Q9UFD9 1639 aa25.3■■□□□ 1.64
LST1-221ENST00000490742 NUP160Q12769 1436 aa25.29■■□□□ 1.64
LST1-221ENST00000490742 CARMIL1Q5VZK9 1371 aa25.26■■□□□ 1.63
LST1-221ENST00000490742 ARHGEF11O15085 1522 aa25.25■■□□□ 1.63
LST1-221ENST00000490742 SHROOM2Q13796 1616 aa25.17■■□□□ 1.62
LST1-221ENST00000490742 RAPGEF2Q9Y4G8 1499 aa25.15■■□□□ 1.62
LST1-221ENST00000490742 EEA1Q15075 1411 aa25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms