RNA–Protein interactions for RNA: ENST00000490686.1

IGKV1-17-201, Transcript of immunoglobulin kappa variable 1-17, humanhuman

APPRIS P1 BASIC

Gene IGKV1-17, Length 378 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1-17-201ENST00000490686 NISCHQ9Y2I1 1504 aa23.79■■□□□ 1.4
IGKV1-17-201ENST00000490686 CCDC180Q9P1Z9 1646 aa21.29■■□□□ 1
IGKV1-17-201ENST00000490686 ABCC9O60706 1549 aa20.77■□□□□ 0.92
IGKV1-17-201ENST00000490686 RB1CC1Q8TDY2 1594 aa20.03■□□□□ 0.8
IGKV1-17-201ENST00000490686 NACADO15069 1562 aa20.01■□□□□ 0.79
IGKV1-17-201ENST00000490686 MYO15BQ96JP2 1530 aa19.93■□□□□ 0.78
IGKV1-17-201ENST00000490686 DCAF8L2P0C7V8 631 aa19.87■□□□□ 0.77
IGKV1-17-201ENST00000490686 ZCCHC6Q5VYS8 1495 aaKnown RBP19.81■□□□□ 0.76
IGKV1-17-201ENST00000490686 DCAF1Q9Y4B6 1507 aa19.77■□□□□ 0.76
IGKV1-17-201ENST00000490686 UNC13AQ9UPW8 1703 aa19.62■□□□□ 0.73
IGKV1-17-201ENST00000490686 BICRAQ9NZM4 1560 aa19.46■□□□□ 0.71
IGKV1-17-201ENST00000490686 PABPN1Q86U42 306 aaKnown RBP eCLIP19.38■□□□□ 0.69
IGKV1-17-201ENST00000490686 SHROOM4Q9ULL8 1493 aa19.32■□□□□ 0.68
IGKV1-17-201ENST00000490686 SCRIBQ14160 1630 aa19.27■□□□□ 0.68
IGKV1-17-201ENST00000490686 DNAJC5BQ9UF47 199 aa19.19■□□□□ 0.66
IGKV1-17-201ENST00000490686 EIF4G1Q04637 1599 aaKnown RBP18.92■□□□□ 0.62
IGKV1-17-201ENST00000490686 CC2D2AQ9P2K1 1620 aa18.86■□□□□ 0.61
IGKV1-17-201ENST00000490686 CECR2Q9BXF3 1484 aa18.71■□□□□ 0.59
IGKV1-17-201ENST00000490686 SMARCA4P51532 1647 aa18.49■□□□□ 0.55
IGKV1-17-201ENST00000490686 NCAPD3P42695 1498 aa18.46■□□□□ 0.54
IGKV1-17-201ENST00000490686 BAZ1AQ9NRL2 1556 aaPredicted RBP18.45■□□□□ 0.54
IGKV1-17-201ENST00000490686 SMARCA2P51531 1590 aa18.41■□□□□ 0.54
IGKV1-17-201ENST00000490686 ATAD2BQ9ULI0 1458 aa18.4■□□□□ 0.54
IGKV1-17-201ENST00000490686 PEG3Q9GZU2 1588 aa18.39■□□□□ 0.53
IGKV1-17-201ENST00000490686 HMGXB3Q12766 1538 aa18.38■□□□□ 0.53
IGKV1-17-201ENST00000490686 MROH2BQ7Z745 1585 aa18.3■□□□□ 0.52
IGKV1-17-201ENST00000490686 BAZ1BQ9UIG0 1483 aaKnown RBP18.21■□□□□ 0.51
IGKV1-17-201ENST00000490686 WIZO95785 1651 aa18.09■□□□□ 0.49
IGKV1-17-201ENST00000490686 RSF1Q96T23 1441 aaPredicted RBP18.04■□□□□ 0.48
IGKV1-17-201ENST00000490686 LAMC3Q9Y6N6 1575 aa18■□□□□ 0.47
IGKV1-17-201ENST00000490686 NESP48681 1621 aa17.96■□□□□ 0.47
IGKV1-17-201ENST00000490686 TOP2AP11388 1531 aaKnown RBP17.93■□□□□ 0.46
IGKV1-17-201ENST00000490686 ERCC6Q03468 1493 aa17.91■□□□□ 0.46
IGKV1-17-201ENST00000490686 CUX2O14529 1486 aa17.88■□□□□ 0.45
IGKV1-17-201ENST00000490686 CADPSQ9ULU8 1353 aa17.86■□□□□ 0.45
IGKV1-17-201ENST00000490686 THOC2Q8NI27 1593 aaKnown RBP17.82■□□□□ 0.44
IGKV1-17-201ENST00000490686 PDS5BQ9NTI5 1447 aa17.81■□□□□ 0.44
IGKV1-17-201ENST00000490686 KIF21AQ7Z4S6 1674 aa17.8■□□□□ 0.44
IGKV1-17-201ENST00000490686 CFTRP13569 1480 aa17.76■□□□□ 0.43
IGKV1-17-201ENST00000490686 PRDM2Q13029 1718 aa17.68■□□□□ 0.42
IGKV1-17-201ENST00000490686 CCDC88BA6NC98 1476 aa17.68■□□□□ 0.42
IGKV1-17-201ENST00000490686 MRC2Q9UBG0 1479 aa17.65■□□□□ 0.42
IGKV1-17-201ENST00000490686 WDR62O43379 1518 aa17.65■□□□□ 0.42
IGKV1-17-201ENST00000490686 FANCD2Q9BXW9 1451 aa17.63■□□□□ 0.41
IGKV1-17-201ENST00000490686 CEP164Q9UPV0 1460 aa17.63■□□□□ 0.41
IGKV1-17-201ENST00000490686 URB2Q14146 1524 aaKnown RBP17.49■□□□□ 0.39
IGKV1-17-201ENST00000490686 DNAJC5Q9H3Z4 198 aa17.43■□□□□ 0.38
IGKV1-17-201ENST00000490686 SUPT5HO00267 1087 aaKnown RBP17.42■□□□□ 0.38
IGKV1-17-201ENST00000490686 ABCC8Q09428 1581 aa17.39■□□□□ 0.37
IGKV1-17-201ENST00000490686 TOPBP1Q92547 1522 aa17.37■□□□□ 0.37
IGKV1-17-201ENST00000490686 DNMBPQ6XZF7 1577 aa17.36■□□□□ 0.37
IGKV1-17-201ENST00000490686 IFT140Q96RY7 1462 aa17.29■□□□□ 0.36
IGKV1-17-201ENST00000490686 TARBP1Q13395 1621 aaKnown RBP17.23■□□□□ 0.35
IGKV1-17-201ENST00000490686 POLA1P09884 1462 aaPredicted RBP17.2■□□□□ 0.34
IGKV1-17-201ENST00000490686 CUX1P39880 1505 aa17.18■□□□□ 0.34
IGKV1-17-201ENST00000490686 ZNF608Q9ULD9 1512 aaPredicted RBP17.18■□□□□ 0.34
IGKV1-17-201ENST00000490686 EIF4G3O43432 1585 aaKnown RBP17.16■□□□□ 0.34
IGKV1-17-201ENST00000490686 WDR97A6NE52 1622 aa17.14■□□□□ 0.33
IGKV1-17-201ENST00000490686 FGD5Q6ZNL6 1462 aa17.12■□□□□ 0.33
IGKV1-17-201ENST00000490686 SOGA1O94964 1423 aa17.09■□□□□ 0.33
IGKV1-17-201ENST00000490686 RAD54L2Q9Y4B4 1467 aa17.07■□□□□ 0.32
IGKV1-17-201ENST00000490686 BIVM-ERCC5R4GMW8 1640 aa17.06■□□□□ 0.32
IGKV1-17-201ENST00000490686 AQRO60306 1485 aaKnown RBP eCLIP17.05■□□□□ 0.32
IGKV1-17-201ENST00000490686 OSCARQ8IYS5 282 aa17.04■□□□□ 0.32
IGKV1-17-201ENST00000490686 TOP2BQ02880 1626 aa17.03■□□□□ 0.32
IGKV1-17-201ENST00000490686 ABCA10Q8WWZ4 1543 aa17.01■□□□□ 0.31
IGKV1-17-201ENST00000490686 WRNQ14191 1432 aaPredicted RBP eCLIP16.99■□□□□ 0.31
IGKV1-17-201ENST00000490686 SYNJ1O43426 1573 aa16.98■□□□□ 0.31
IGKV1-17-201ENST00000490686 TDRD9Q8NDG6 1382 aaKnown RBP16.97■□□□□ 0.31
IGKV1-17-201ENST00000490686 ABCA5Q8WWZ7 1642 aa16.96■□□□□ 0.31
IGKV1-17-201ENST00000490686 CHD1O14646 1710 aa16.96■□□□□ 0.31
IGKV1-17-201ENST00000490686 GRIN2BQ13224 1484 aa16.94■□□□□ 0.3
IGKV1-17-201ENST00000490686 MAGI1Q96QZ7 1491 aaPredicted RBP16.94■□□□□ 0.3
IGKV1-17-201ENST00000490686 PBRM1Q86U86 1689 aa16.93■□□□□ 0.3
IGKV1-17-201ENST00000490686 GAPVD1Q14C86 1478 aa16.91■□□□□ 0.3
IGKV1-17-201ENST00000490686 SNAPC4Q5SXM2 1469 aa16.91■□□□□ 0.3
IGKV1-17-201ENST00000490686 FBLN2P98095 1184 aa16.89■□□□□ 0.29
IGKV1-17-201ENST00000490686 SYNJ2O15056 1496 aa16.86■□□□□ 0.29
IGKV1-17-201ENST00000490686 RIMBP3CA6NJZ7 1639 aa16.82■□□□□ 0.28
IGKV1-17-201ENST00000490686 RIMBP3BA6NNM3 1639 aa16.82■□□□□ 0.28
IGKV1-17-201ENST00000490686 RIMBP3Q9UFD9 1639 aa16.82■□□□□ 0.28
IGKV1-17-201ENST00000490686 CLASP1Q7Z460 1538 aa16.82■□□□□ 0.28
IGKV1-17-201ENST00000490686 CHMP7Q8WUX9 453 aaPredicted RBP16.82■□□□□ 0.28
IGKV1-17-201ENST00000490686 ERICH3Q5RHP9 1530 aa16.8■□□□□ 0.28
IGKV1-17-201ENST00000490686 ARHGEF11O15085 1522 aa16.8■□□□□ 0.28
IGKV1-17-201ENST00000490686 TRIM41Q8WV44 630 aa16.79■□□□□ 0.28
IGKV1-17-201ENST00000490686 ADAMTS12P58397 1594 aa16.79■□□□□ 0.28
IGKV1-17-201ENST00000490686 GRIN2AQ12879 1464 aa16.73■□□□□ 0.27
IGKV1-17-201ENST00000490686 FHAD1B1AJZ9 1412 aa16.72■□□□□ 0.27
IGKV1-17-201ENST00000490686 NUP160Q12769 1436 aa16.7■□□□□ 0.26
IGKV1-17-201ENST00000490686 CEP170Q5SW79 1584 aa16.66■□□□□ 0.26
IGKV1-17-201ENST00000490686 ARAP1Q96P48 1450 aa16.66■□□□□ 0.26
IGKV1-17-201ENST00000490686 KIF27Q86VH2 1401 aa16.64■□□□□ 0.25
IGKV1-17-201ENST00000490686 CUL7Q14999 1698 aa16.63■□□□□ 0.25
IGKV1-17-201ENST00000490686 SHROOM2Q13796 1616 aa16.63■□□□□ 0.25
IGKV1-17-201ENST00000490686 CYB5RLQ6IPT4 315 aa16.62■□□□□ 0.25
IGKV1-17-201ENST00000490686 IGF1RP08069 1367 aa16.61■□□□□ 0.25
IGKV1-17-201ENST00000490686 RUSC2Q8N2Y8 1516 aa16.55■□□□□ 0.24
IGKV1-17-201ENST00000490686 ERCC6L2Q5T890 1561 aa16.51■□□□□ 0.23
IGKV1-17-201ENST00000490686 KIAA0586Q9BVV6 1533 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms