RNA–Protein interactions for RNA: ENST00000490643.5

TPRA1-211, Transcript of transmembrane protein adipocyte associated 1, humanhuman

TSL 5

Gene TPRA1, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPRA1-211ENST00000490643 NISCHQ9Y2I1 1504 aa50.52■■■■■ 5.68
TPRA1-211ENST00000490643 CCDC180Q9P1Z9 1646 aa45.15■■■■■ 4.82
TPRA1-211ENST00000490643 ABCC9O60706 1549 aa44.89■■■■■ 4.78
TPRA1-211ENST00000490643 RB1CC1Q8TDY2 1594 aa42.88■■■■■ 4.45
TPRA1-211ENST00000490643 DCAF8L2P0C7V8 631 aa42.72■■■■■ 4.43
TPRA1-211ENST00000490643 NACADO15069 1562 aa42.65■■■■■ 4.42
TPRA1-211ENST00000490643 MYO15BQ96JP2 1530 aa42.15■■■■■ 4.34
TPRA1-211ENST00000490643 ZCCHC6Q5VYS8 1495 aaKnown RBP41.92■■■■■ 4.3
TPRA1-211ENST00000490643 PABPN1Q86U42 306 aaKnown RBP eCLIP41.91■■■■■ 4.3
TPRA1-211ENST00000490643 UNC13AQ9UPW8 1703 aa41.78■■■■■ 4.28
TPRA1-211ENST00000490643 DNAJC5BQ9UF47 199 aa41.75■■■■■ 4.27
TPRA1-211ENST00000490643 DCAF1Q9Y4B6 1507 aa41.73■■■■■ 4.27
TPRA1-211ENST00000490643 BICRAQ9NZM4 1560 aa41.5■■■■■ 4.23
TPRA1-211ENST00000490643 SCRIBQ14160 1630 aa41.22■■■■■ 4.19
TPRA1-211ENST00000490643 SHROOM4Q9ULL8 1493 aa41.06■■■■■ 4.16
TPRA1-211ENST00000490643 CC2D2AQ9P2K1 1620 aa40.53■■■■■ 4.08
TPRA1-211ENST00000490643 EIF4G1Q04637 1599 aaKnown RBP40.52■■■■■ 4.08
TPRA1-211ENST00000490643 CECR2Q9BXF3 1484 aa40.41■■■■■ 4.06
TPRA1-211ENST00000490643 NCAPD3P42695 1498 aa39.37■■■■□ 3.89
TPRA1-211ENST00000490643 SMARCA4P51532 1647 aa39.32■■■■□ 3.89
TPRA1-211ENST00000490643 ATAD2BQ9ULI0 1458 aa39.3■■■■□ 3.88
TPRA1-211ENST00000490643 SMARCA2P51531 1590 aa39.24■■■■□ 3.87
TPRA1-211ENST00000490643 BAZ1AQ9NRL2 1556 aaPredicted RBP39.22■■■■□ 3.87
TPRA1-211ENST00000490643 HMGXB3Q12766 1538 aa39.09■■■■□ 3.85
TPRA1-211ENST00000490643 BAZ1BQ9UIG0 1483 aaKnown RBP38.98■■■■□ 3.83
TPRA1-211ENST00000490643 MROH2BQ7Z745 1585 aa38.92■■■■□ 3.82
TPRA1-211ENST00000490643 PEG3Q9GZU2 1588 aa38.91■■■■□ 3.82
TPRA1-211ENST00000490643 ERCC6Q03468 1493 aa38.81■■■■□ 3.8
TPRA1-211ENST00000490643 NESP48681 1621 aa38.62■■■■□ 3.77
TPRA1-211ENST00000490643 CUX2O14529 1486 aa38.54■■■■□ 3.76
TPRA1-211ENST00000490643 WIZO95785 1651 aa38.47■■■■□ 3.75
TPRA1-211ENST00000490643 LAMC3Q9Y6N6 1575 aa38.43■■■■□ 3.74
TPRA1-211ENST00000490643 RSF1Q96T23 1441 aaPredicted RBP38.28■■■■□ 3.72
TPRA1-211ENST00000490643 PDS5BQ9NTI5 1447 aa38.28■■■■□ 3.72
TPRA1-211ENST00000490643 CADPSQ9ULU8 1353 aa38.23■■■■□ 3.71
TPRA1-211ENST00000490643 DNAJC5Q9H3Z4 198 aa38.14■■■■□ 3.7
TPRA1-211ENST00000490643 KIF21AQ7Z4S6 1674 aa38.11■■■■□ 3.69
TPRA1-211ENST00000490643 THOC2Q8NI27 1593 aaKnown RBP38.1■■■■□ 3.69
TPRA1-211ENST00000490643 TOP2AP11388 1531 aaKnown RBP38.03■■■■□ 3.68
TPRA1-211ENST00000490643 MRC2Q9UBG0 1479 aa37.87■■■■□ 3.65
TPRA1-211ENST00000490643 CFTRP13569 1480 aa37.83■■■■□ 3.65
TPRA1-211ENST00000490643 CEP164Q9UPV0 1460 aa37.81■■■■□ 3.64
TPRA1-211ENST00000490643 FANCD2Q9BXW9 1451 aa37.79■■■■□ 3.64
TPRA1-211ENST00000490643 WDR62O43379 1518 aa37.71■■■■□ 3.63
TPRA1-211ENST00000490643 CCDC88BA6NC98 1476 aa37.62■■■■□ 3.61
TPRA1-211ENST00000490643 PRDM2Q13029 1718 aa37.41■■■■□ 3.58
TPRA1-211ENST00000490643 URB2Q14146 1524 aaKnown RBP37.41■■■■□ 3.58
TPRA1-211ENST00000490643 ABCC8Q09428 1581 aa37.09■■■■□ 3.53
TPRA1-211ENST00000490643 TOPBP1Q92547 1522 aa37.08■■■■□ 3.53
TPRA1-211ENST00000490643 IFT140Q96RY7 1462 aa37.03■■■■□ 3.52
TPRA1-211ENST00000490643 SUPT5HO00267 1087 aaKnown RBP37■■■■□ 3.51
TPRA1-211ENST00000490643 DNMBPQ6XZF7 1577 aa36.98■■■■□ 3.51
TPRA1-211ENST00000490643 OSCARQ8IYS5 282 aa36.94■■■■□ 3.5
TPRA1-211ENST00000490643 ZNF608Q9ULD9 1512 aaPredicted RBP36.9■■■■□ 3.5
TPRA1-211ENST00000490643 POLA1P09884 1462 aaPredicted RBP36.73■■■■□ 3.47
TPRA1-211ENST00000490643 TRIM41Q8WV44 630 aa36.72■■■■□ 3.47
TPRA1-211ENST00000490643 EIF4G3O43432 1585 aaKnown RBP36.7■■■■□ 3.46
TPRA1-211ENST00000490643 TARBP1Q13395 1621 aaKnown RBP36.68■■■■□ 3.46
TPRA1-211ENST00000490643 AQRO60306 1485 aaKnown RBP eCLIP36.65■■■■□ 3.467e-7■■■■□ 26.4
TPRA1-211ENST00000490643 SOGA1O94964 1423 aa36.63■■■■□ 3.45
TPRA1-211ENST00000490643 RAD54L2Q9Y4B4 1467 aa36.6■■■■□ 3.45
TPRA1-211ENST00000490643 FGD5Q6ZNL6 1462 aa36.56■■■■□ 3.44
TPRA1-211ENST00000490643 CUX1P39880 1505 aa36.55■■■■□ 3.44
TPRA1-211ENST00000490643 TDRD9Q8NDG6 1382 aaKnown RBP36.51■■■■□ 3.43
TPRA1-211ENST00000490643 FBLN2P98095 1184 aa36.48■■■■□ 3.43
TPRA1-211ENST00000490643 WDR97A6NE52 1622 aa36.37■■■■□ 3.41
TPRA1-211ENST00000490643 CHD1O14646 1710 aa36.34■■■■□ 3.41
TPRA1-211ENST00000490643 RIMBP3CA6NJZ7 1639 aa36.28■■■■□ 3.4
TPRA1-211ENST00000490643 RIMBP3BA6NNM3 1639 aa36.28■■■■□ 3.4
TPRA1-211ENST00000490643 RIMBP3Q9UFD9 1639 aa36.28■■■■□ 3.4
TPRA1-211ENST00000490643 SNAPC4Q5SXM2 1469 aa36.28■■■■□ 3.4
TPRA1-211ENST00000490643 GRIN2BQ13224 1484 aa36.25■■■■□ 3.39
TPRA1-211ENST00000490643 CHMP7Q8WUX9 453 aaPredicted RBP36.24■■■■□ 3.39
TPRA1-211ENST00000490643 ARHGEF11O15085 1522 aa36.23■■■■□ 3.39
TPRA1-211ENST00000490643 MAGI1Q96QZ7 1491 aaPredicted RBP36.2■■■■□ 3.39
TPRA1-211ENST00000490643 GAPVD1Q14C86 1478 aa36.18■■■■□ 3.38
TPRA1-211ENST00000490643 ABCA10Q8WWZ4 1543 aa36.16■■■■□ 3.38
TPRA1-211ENST00000490643 WRNQ14191 1432 aaPredicted RBP eCLIP36.16■■■■□ 3.38
TPRA1-211ENST00000490643 SYNJ2O15056 1496 aa36.08■■■■□ 3.37
TPRA1-211ENST00000490643 TOP2BQ02880 1626 aa36.07■■■■□ 3.36
TPRA1-211ENST00000490643 CYB5RLQ6IPT4 315 aa36.06■■■■□ 3.36
TPRA1-211ENST00000490643 PBRM1Q86U86 1689 aa36.06■■■■□ 3.36
TPRA1-211ENST00000490643 BIVM-ERCC5R4GMW8 1640 aa36.04■■■■□ 3.36
TPRA1-211ENST00000490643 SYNJ1O43426 1573 aa36.02■■■■□ 3.36
TPRA1-211ENST00000490643 ABCA5Q8WWZ7 1642 aa36.02■■■■□ 3.36
TPRA1-211ENST00000490643 CLASP1Q7Z460 1538 aa35.93■■■■□ 3.34
TPRA1-211ENST00000490643 ARAP1Q96P48 1450 aa35.87■■■■□ 3.33
TPRA1-211ENST00000490643 GRIN2AQ12879 1464 aa35.76■■■■□ 3.32
TPRA1-211ENST00000490643 ADAMTS12P58397 1594 aa35.75■■■■□ 3.31
TPRA1-211ENST00000490643 FHAD1B1AJZ9 1412 aa35.74■■■■□ 3.31
TPRA1-211ENST00000490643 ERICH3Q5RHP9 1530 aa35.72■■■■□ 3.31
TPRA1-211ENST00000490643 TRHP20396 242 aaPredicted RBP35.61■■■■□ 3.29
TPRA1-211ENST00000490643 NUP160Q12769 1436 aa35.6■■■■□ 3.29
TPRA1-211ENST00000490643 CEP170Q5SW79 1584 aa35.57■■■■□ 3.28
TPRA1-211ENST00000490643 KIF27Q86VH2 1401 aa35.47■■■■□ 3.27
TPRA1-211ENST00000490643 ERCC6L2Q5T890 1561 aa35.39■■■■□ 3.26
TPRA1-211ENST00000490643 IGF1RP08069 1367 aa35.37■■■■□ 3.25
TPRA1-211ENST00000490643 SHROOM2Q13796 1616 aa35.35■■■■□ 3.25
TPRA1-211ENST00000490643 JPH4Q96JJ6 628 aa35.34■■■■□ 3.25
TPRA1-211ENST00000490643 PRG4Q92954 1404 aaPredicted RBP35.3■■■■□ 3.24
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms