RNA–Protein interactions for RNA: ENST00000490635.1

PHF8-217, Transcript of PHD finger protein 8, humanhuman

TSL 2

Gene PHF8, Length 950 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8-217ENST00000490635 NISCHQ9Y2I1 1504 aa31.82■■■□□ 2.68
PHF8-217ENST00000490635 CCDC180Q9P1Z9 1646 aa28■■■□□ 2.07
PHF8-217ENST00000490635 ABCC9O60706 1549 aa26.95■■□□□ 1.91
PHF8-217ENST00000490635 ZCCHC6Q5VYS8 1495 aaKnown RBP26.62■■□□□ 1.85
PHF8-217ENST00000490635 DCAF8L2P0C7V8 631 aa26.51■■□□□ 1.83
PHF8-217ENST00000490635 DCAF1Q9Y4B6 1507 aa26.26■■□□□ 1.79
PHF8-217ENST00000490635 NACADO15069 1562 aa26.16■■□□□ 1.78
PHF8-217ENST00000490635 MYO15BQ96JP2 1530 aa26.1■■□□□ 1.77
PHF8-217ENST00000490635 RB1CC1Q8TDY2 1594 aa26.08■■□□□ 1.77
PHF8-217ENST00000490635 SCRIBQ14160 1630 aa25.74■■□□□ 1.71
PHF8-217ENST00000490635 SHROOM4Q9ULL8 1493 aa25.71■■□□□ 1.71
PHF8-217ENST00000490635 UNC13AQ9UPW8 1703 aa25.61■■□□□ 1.69
PHF8-217ENST00000490635 PABPN1Q86U42 306 aaKnown RBP eCLIP25.33■■□□□ 1.65
PHF8-217ENST00000490635 BICRAQ9NZM4 1560 aa25.31■■□□□ 1.64
PHF8-217ENST00000490635 CECR2Q9BXF3 1484 aa24.8■■□□□ 1.56
PHF8-217ENST00000490635 BAZ1AQ9NRL2 1556 aaPredicted RBP24.6■■□□□ 1.53
PHF8-217ENST00000490635 SMARCA4P51532 1647 aa24.6■■□□□ 1.53
PHF8-217ENST00000490635 MROH2BQ7Z745 1585 aa24.59■■□□□ 1.53
PHF8-217ENST00000490635 EIF4G1Q04637 1599 aaKnown RBP24.59■■□□□ 1.53
PHF8-217ENST00000490635 RSF1Q96T23 1441 aaPredicted RBP24.49■■□□□ 1.51
PHF8-217ENST00000490635 SUPT5HO00267 1087 aaKnown RBP24.45■■□□□ 1.5
PHF8-217ENST00000490635 WIZO95785 1651 aa24.4■■□□□ 1.5
PHF8-217ENST00000490635 CC2D2AQ9P2K1 1620 aa24.37■■□□□ 1.49
PHF8-217ENST00000490635 ATAD2BQ9ULI0 1458 aa24.28■■□□□ 1.48
PHF8-217ENST00000490635 SMARCA2P51531 1590 aa24.25■■□□□ 1.47
PHF8-217ENST00000490635 PEG3Q9GZU2 1588 aa24.25■■□□□ 1.47
PHF8-217ENST00000490635 DNAJC5BQ9UF47 199 aa24.2■■□□□ 1.46
PHF8-217ENST00000490635 BAZ1BQ9UIG0 1483 aaKnown RBP24.13■■□□□ 1.45
PHF8-217ENST00000490635 NCAPD3P42695 1498 aa24.13■■□□□ 1.45
PHF8-217ENST00000490635 TOP2AP11388 1531 aaKnown RBP24.09■■□□□ 1.45
PHF8-217ENST00000490635 HMGXB3Q12766 1538 aa24.07■■□□□ 1.44
PHF8-217ENST00000490635 CCDC88BA6NC98 1476 aa23.83■■□□□ 1.41
PHF8-217ENST00000490635 AEBP2Q6ZN18 517 aaPredicted RBP23.79■■□□□ 1.4
PHF8-217ENST00000490635 CHIC1Q5VXU3 224 aa23.54■■□□□ 1.36
PHF8-217ENST00000490635 NESP48681 1621 aa23.51■■□□□ 1.35
PHF8-217ENST00000490635 CADPSQ9ULU8 1353 aa23.49■■□□□ 1.35
PHF8-217ENST00000490635 CFTRP13569 1480 aa23.47■■□□□ 1.35
PHF8-217ENST00000490635 LAMC3Q9Y6N6 1575 aa23.42■■□□□ 1.34
PHF8-217ENST00000490635 PRDM2Q13029 1718 aa23.39■■□□□ 1.34
PHF8-217ENST00000490635 FANCD2Q9BXW9 1451 aa23.26■■□□□ 1.31
PHF8-217ENST00000490635 KIF21AQ7Z4S6 1674 aa23.25■■□□□ 1.31
PHF8-217ENST00000490635 PDS5BQ9NTI5 1447 aa23.24■■□□□ 1.31
PHF8-217ENST00000490635 ABCC8Q09428 1581 aa23.23■■□□□ 1.31
PHF8-217ENST00000490635 CEP164Q9UPV0 1460 aa23.17■■□□□ 1.3
PHF8-217ENST00000490635 ERCC6Q03468 1493 aa23.15■■□□□ 1.3
PHF8-217ENST00000490635 WRNQ14191 1432 aaPredicted RBP eCLIP23.08■■□□□ 1.28
PHF8-217ENST00000490635 SYNJ1O43426 1573 aa23.04■■□□□ 1.28
PHF8-217ENST00000490635 CUX1P39880 1505 aa23.03■■□□□ 1.28
PHF8-217ENST00000490635 URB2Q14146 1524 aaKnown RBP23.01■■□□□ 1.27
PHF8-217ENST00000490635 MRC2Q9UBG0 1479 aa23■■□□□ 1.27
PHF8-217ENST00000490635 TRIM41Q8WV44 630 aa22.99■■□□□ 1.27
PHF8-217ENST00000490635 DNMBPQ6XZF7 1577 aa22.97■■□□□ 1.27
PHF8-217ENST00000490635 THOC2Q8NI27 1593 aaKnown RBP22.97■■□□□ 1.27
PHF8-217ENST00000490635 TOPBP1Q92547 1522 aa22.96■■□□□ 1.27
PHF8-217ENST00000490635 TOP2BQ02880 1626 aa22.96■■□□□ 1.27
PHF8-217ENST00000490635 BIVM-ERCC5R4GMW8 1640 aa22.96■■□□□ 1.27
PHF8-217ENST00000490635 WDR62O43379 1518 aa22.89■■□□□ 1.26
PHF8-217ENST00000490635 FGD5Q6ZNL6 1462 aa22.85■■□□□ 1.25
PHF8-217ENST00000490635 POLA1P09884 1462 aaPredicted RBP22.8■■□□□ 1.24
PHF8-217ENST00000490635 RAD54L2Q9Y4B4 1467 aa22.76■■□□□ 1.23
PHF8-217ENST00000490635 SOGA1O94964 1423 aa22.72■■□□□ 1.23
PHF8-217ENST00000490635 CUX2O14529 1486 aa22.72■■□□□ 1.23
PHF8-217ENST00000490635 TARBP1Q13395 1621 aaKnown RBP22.66■■□□□ 1.22
PHF8-217ENST00000490635 WDR97A6NE52 1622 aa22.64■■□□□ 1.21
PHF8-217ENST00000490635 FAM9AQ8IZU1 332 aaPredicted RBP22.63■■□□□ 1.21
PHF8-217ENST00000490635 RUSC2Q8N2Y8 1516 aa22.62■■□□□ 1.21
PHF8-217ENST00000490635 IFT140Q96RY7 1462 aa22.62■■□□□ 1.21
PHF8-217ENST00000490635 ABCA10Q8WWZ4 1543 aa22.6■■□□□ 1.21
PHF8-217ENST00000490635 TDRD9Q8NDG6 1382 aaKnown RBP22.57■■□□□ 1.2
PHF8-217ENST00000490635 ZNF608Q9ULD9 1512 aaPredicted RBP22.56■■□□□ 1.2
PHF8-217ENST00000490635 KIF27Q86VH2 1401 aa22.52■■□□□ 1.2
PHF8-217ENST00000490635 AQRO60306 1485 aaKnown RBP eCLIP22.5■■□□□ 1.19
PHF8-217ENST00000490635 ABCA5Q8WWZ7 1642 aa22.49■■□□□ 1.19
PHF8-217ENST00000490635 EIF4G3O43432 1585 aaKnown RBP22.47■■□□□ 1.19
PHF8-217ENST00000490635 GAPVD1Q14C86 1478 aa22.47■■□□□ 1.19
PHF8-217ENST00000490635 EEA1Q15075 1411 aa22.44■■□□□ 1.18
PHF8-217ENST00000490635 PBRM1Q86U86 1689 aa22.43■■□□□ 1.18
PHF8-217ENST00000490635 CSRNP3Q8WYN3 585 aa22.4■■□□□ 1.18
PHF8-217ENST00000490635 EHMT2Q96KQ7 1210 aa22.38■■□□□ 1.17
PHF8-217ENST00000490635 IGF1RP08069 1367 aa22.38■■□□□ 1.17
PHF8-217ENST00000490635 GRIN2BQ13224 1484 aa22.35■■□□□ 1.17
PHF8-217ENST00000490635 ERICH3Q5RHP9 1530 aa22.33■■□□□ 1.17
PHF8-217ENST00000490635 SNAPC4Q5SXM2 1469 aa22.3■■□□□ 1.16
PHF8-217ENST00000490635 CUL7Q14999 1698 aa22.27■■□□□ 1.16
PHF8-217ENST00000490635 CARMIL1Q5VZK9 1371 aa22.26■■□□□ 1.15
PHF8-217ENST00000490635 LOC105371045A0A1W2PR82 267 aa22.25■■□□□ 1.15
PHF8-217ENST00000490635 ADAMTS12P58397 1594 aa22.25■■□□□ 1.15
PHF8-217ENST00000490635 PRXQ9BXM0 1461 aa22.24■■□□□ 1.15
PHF8-217ENST00000490635 KIF21BO75037 1637 aa22.23■■□□□ 1.15
PHF8-217ENST00000490635 MAGI1Q96QZ7 1491 aaPredicted RBP22.21■■□□□ 1.15
PHF8-217ENST00000490635 RAPGEF2Q9Y4G8 1499 aa22.21■■□□□ 1.15
PHF8-217ENST00000490635 FHAD1B1AJZ9 1412 aa22.19■■□□□ 1.14
PHF8-217ENST00000490635 GOLGA3Q08378 1498 aa22.16■■□□□ 1.14
PHF8-217ENST00000490635 FBLN2P98095 1184 aa22.16■■□□□ 1.14
PHF8-217ENST00000490635 SYNJ2O15056 1496 aa22.14■■□□□ 1.13
PHF8-217ENST00000490635 CHD1O14646 1710 aa22.13■■□□□ 1.13
PHF8-217ENST00000490635 CHMP7Q8WUX9 453 aaPredicted RBP22.12■■□□□ 1.13
PHF8-217ENST00000490635 UBTFP17480 764 aaKnown RBP22.11■■□□□ 1.13
PHF8-217ENST00000490635 GRIN2AQ12879 1464 aa22.09■■□□□ 1.13
PHF8-217ENST00000490635 CTTNBP2Q8WZ74 1663 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 134 ms