RNA–Protein interactions for RNA: ENST00000490629.5

GPC2-205, Transcript of glypican 2, humanhuman

TSL 3

Gene GPC2, Length 798 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC2-205ENST00000490629 NISCHQ9Y2I1 1504 aa46.63■■■■■ 5.05
GPC2-205ENST00000490629 CCDC180Q9P1Z9 1646 aa41.66■■■■■ 4.26
GPC2-205ENST00000490629 ABCC9O60706 1549 aa41.27■■■■■ 4.2
GPC2-205ENST00000490629 RB1CC1Q8TDY2 1594 aa39.46■■■■□ 3.91
GPC2-205ENST00000490629 NACADO15069 1562 aa39.32■■■■□ 3.88
GPC2-205ENST00000490629 DCAF8L2P0C7V8 631 aa39.04■■■■□ 3.84
GPC2-205ENST00000490629 MYO15BQ96JP2 1530 aa38.96■■■■□ 3.83
GPC2-205ENST00000490629 ZCCHC6Q5VYS8 1495 aaKnown RBP38.73■■■■□ 3.79
GPC2-205ENST00000490629 UNC13AQ9UPW8 1703 aa38.59■■■■□ 3.77
GPC2-205ENST00000490629 DCAF1Q9Y4B6 1507 aa38.58■■■■□ 3.77
GPC2-205ENST00000490629 DNAJC5BQ9UF47 199 aa38.51■■■■□ 3.76
GPC2-205ENST00000490629 PABPN1Q86U42 306 aaKnown RBP eCLIP38.49■■■■□ 3.75
GPC2-205ENST00000490629 BICRAQ9NZM4 1560 aa38.38■■■■□ 3.73
GPC2-205ENST00000490629 SCRIBQ14160 1630 aa37.92■■■■□ 3.66
GPC2-205ENST00000490629 SHROOM4Q9ULL8 1493 aa37.89■■■■□ 3.66
GPC2-205ENST00000490629 EIF4G1Q04637 1599 aaKnown RBP37.35■■■■□ 3.57
GPC2-205ENST00000490629 CC2D2AQ9P2K1 1620 aa37.33■■■■□ 3.57
GPC2-205ENST00000490629 CECR2Q9BXF3 1484 aa37.16■■■■□ 3.54
GPC2-205ENST00000490629 NCAPD3P42695 1498 aa36.33■■■■□ 3.41
GPC2-205ENST00000490629 SMARCA4P51532 1647 aa36.26■■■■□ 3.4
GPC2-205ENST00000490629 ATAD2BQ9ULI0 1458 aa36.24■■■■□ 3.39
GPC2-205ENST00000490629 SMARCA2P51531 1590 aa36.13■■■■□ 3.37
GPC2-205ENST00000490629 BAZ1AQ9NRL2 1556 aaPredicted RBP36.13■■■■□ 3.37
GPC2-205ENST00000490629 HMGXB3Q12766 1538 aa36.06■■■■□ 3.36
GPC2-205ENST00000490629 PEG3Q9GZU2 1588 aa35.98■■■■□ 3.35
GPC2-205ENST00000490629 MROH2BQ7Z745 1585 aa35.93■■■■□ 3.34
GPC2-205ENST00000490629 BAZ1BQ9UIG0 1483 aaKnown RBP35.86■■■■□ 3.33
GPC2-205ENST00000490629 NESP48681 1621 aa35.59■■■■□ 3.29
GPC2-205ENST00000490629 ERCC6Q03468 1493 aa35.56■■■■□ 3.28
GPC2-205ENST00000490629 WIZO95785 1651 aa35.47■■■■□ 3.27
GPC2-205ENST00000490629 CUX2O14529 1486 aa35.47■■■■□ 3.27
GPC2-205ENST00000490629 LAMC3Q9Y6N6 1575 aa35.39■■■■□ 3.26
GPC2-205ENST00000490629 RSF1Q96T23 1441 aaPredicted RBP35.33■■■■□ 3.25
GPC2-205ENST00000490629 CADPSQ9ULU8 1353 aa35.22■■■■□ 3.23
GPC2-205ENST00000490629 PDS5BQ9NTI5 1447 aa35.17■■■■□ 3.22
GPC2-205ENST00000490629 THOC2Q8NI27 1593 aaKnown RBP35.17■■■■□ 3.22
GPC2-205ENST00000490629 KIF21AQ7Z4S6 1674 aa35.11■■■■□ 3.21
GPC2-205ENST00000490629 DNAJC5Q9H3Z4 198 aa35.08■■■■□ 3.21
GPC2-205ENST00000490629 TOP2AP11388 1531 aaKnown RBP35.07■■■■□ 3.21
GPC2-205ENST00000490629 CFTRP13569 1480 aa34.9■■■■□ 3.18
GPC2-205ENST00000490629 MRC2Q9UBG0 1479 aa34.85■■■■□ 3.17
GPC2-205ENST00000490629 WDR62O43379 1518 aa34.78■■■■□ 3.16
GPC2-205ENST00000490629 FANCD2Q9BXW9 1451 aa34.78■■■■□ 3.16
GPC2-205ENST00000490629 CEP164Q9UPV0 1460 aa34.76■■■■□ 3.15
GPC2-205ENST00000490629 CCDC88BA6NC98 1476 aa34.69■■■■□ 3.14
GPC2-205ENST00000490629 PRDM2Q13029 1718 aa34.52■■■■□ 3.12
GPC2-205ENST00000490629 URB2Q14146 1524 aaKnown RBP34.5■■■■□ 3.11
GPC2-205ENST00000490629 TOPBP1Q92547 1522 aa34.18■■■■□ 3.06
GPC2-205ENST00000490629 ABCC8Q09428 1581 aa34.12■■■■□ 3.05
GPC2-205ENST00000490629 IFT140Q96RY7 1462 aa34.08■■■■□ 3.05
GPC2-205ENST00000490629 DNMBPQ6XZF7 1577 aa34.07■■■■□ 3.05
GPC2-205ENST00000490629 ZNF608Q9ULD9 1512 aaPredicted RBP34.01■■■■□ 3.04
GPC2-205ENST00000490629 SUPT5HO00267 1087 aaKnown RBP33.9■■■■□ 3.02
GPC2-205ENST00000490629 OSCARQ8IYS5 282 aa33.89■■■■□ 3.02
GPC2-205ENST00000490629 TARBP1Q13395 1621 aaKnown RBP33.86■■■■□ 3.01
GPC2-205ENST00000490629 POLA1P09884 1462 aaPredicted RBP33.85■■■■□ 3.01
GPC2-205ENST00000490629 EIF4G3O43432 1585 aaKnown RBP33.8■■■■□ 3
GPC2-205ENST00000490629 CUX1P39880 1505 aa33.74■■■□□ 2.99
GPC2-205ENST00000490629 AQRO60306 1485 aaKnown RBP eCLIP33.73■■■□□ 2.99
GPC2-205ENST00000490629 RAD54L2Q9Y4B4 1467 aa33.71■■■□□ 2.99
GPC2-205ENST00000490629 SOGA1O94964 1423 aa33.69■■■□□ 2.98
GPC2-205ENST00000490629 FGD5Q6ZNL6 1462 aa33.67■■■□□ 2.98
GPC2-205ENST00000490629 TDRD9Q8NDG6 1382 aaKnown RBP33.58■■■□□ 2.97
GPC2-205ENST00000490629 TRIM41Q8WV44 630 aa33.54■■■□□ 2.96
GPC2-205ENST00000490629 WDR97A6NE52 1622 aa33.53■■■□□ 2.96
GPC2-205ENST00000490629 CHD1O14646 1710 aa33.47■■■□□ 2.95
GPC2-205ENST00000490629 RIMBP3CA6NJZ7 1639 aa33.4■■■□□ 2.94
GPC2-205ENST00000490629 RIMBP3BA6NNM3 1639 aa33.4■■■□□ 2.94
GPC2-205ENST00000490629 RIMBP3Q9UFD9 1639 aa33.4■■■□□ 2.94
GPC2-205ENST00000490629 SNAPC4Q5SXM2 1469 aa33.37■■■□□ 2.93
GPC2-205ENST00000490629 GRIN2BQ13224 1484 aa33.36■■■□□ 2.93
GPC2-205ENST00000490629 ARHGEF11O15085 1522 aa33.35■■■□□ 2.93
GPC2-205ENST00000490629 ABCA10Q8WWZ4 1543 aa33.35■■■□□ 2.93
GPC2-205ENST00000490629 FBLN2P98095 1184 aa33.34■■■□□ 2.93
GPC2-205ENST00000490629 MAGI1Q96QZ7 1491 aaPredicted RBP33.33■■■□□ 2.93
GPC2-205ENST00000490629 GAPVD1Q14C86 1478 aa33.29■■■□□ 2.92
GPC2-205ENST00000490629 TOP2BQ02880 1626 aa33.28■■■□□ 2.92
GPC2-205ENST00000490629 BIVM-ERCC5R4GMW8 1640 aa33.27■■■□□ 2.92
GPC2-205ENST00000490629 WRNQ14191 1432 aaPredicted RBP eCLIP33.27■■■□□ 2.92
GPC2-205ENST00000490629 ABCA5Q8WWZ7 1642 aa33.25■■■□□ 2.91
GPC2-205ENST00000490629 SYNJ1O43426 1573 aa33.23■■■□□ 2.91
GPC2-205ENST00000490629 PBRM1Q86U86 1689 aa33.21■■■□□ 2.91
GPC2-205ENST00000490629 SYNJ2O15056 1496 aa33.21■■■□□ 2.91
GPC2-205ENST00000490629 CHMP7Q8WUX9 453 aaPredicted RBP33.2■■■□□ 2.91
GPC2-205ENST00000490629 CLASP1Q7Z460 1538 aa33.16■■■□□ 2.9
GPC2-205ENST00000490629 ARAP1Q96P48 1450 aa33.06■■■□□ 2.88
GPC2-205ENST00000490629 CYB5RLQ6IPT4 315 aa33.04■■■□□ 2.88
GPC2-205ENST00000490629 ADAMTS12P58397 1594 aa32.96■■■□□ 2.87
GPC2-205ENST00000490629 GRIN2AQ12879 1464 aa32.93■■■□□ 2.86
GPC2-205ENST00000490629 ERICH3Q5RHP9 1530 aa32.92■■■□□ 2.86
GPC2-205ENST00000490629 FHAD1B1AJZ9 1412 aa32.89■■■□□ 2.86
GPC2-205ENST00000490629 NUP160Q12769 1436 aa32.85■■■□□ 2.85
GPC2-205ENST00000490629 CEP170Q5SW79 1584 aa32.8■■■□□ 2.84
GPC2-205ENST00000490629 ERCC6L2Q5T890 1561 aa32.66■■■□□ 2.82
GPC2-205ENST00000490629 SHROOM2Q13796 1616 aa32.66■■■□□ 2.82
GPC2-205ENST00000490629 IGF1RP08069 1367 aa32.62■■■□□ 2.81
GPC2-205ENST00000490629 KIF27Q86VH2 1401 aa32.61■■■□□ 2.81
GPC2-205ENST00000490629 TRHP20396 242 aaPredicted RBP32.49■■■□□ 2.79
GPC2-205ENST00000490629 RUSC2Q8N2Y8 1516 aa32.48■■■□□ 2.79
GPC2-205ENST00000490629 JPH4Q96JJ6 628 aa32.48■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms