RNA–Protein interactions for RNA: ENST00000490544.1

C9orf43-203, Transcript of chromosome 9 open reading frame 43, humanhuman

TSL 3

Gene C9orf43, Length 547 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-203ENST00000490544 NISCHQ9Y2I1 1504 aa37.43■■■■□ 3.58
C9orf43-203ENST00000490544 CCDC180Q9P1Z9 1646 aa33.33■■■□□ 2.93
C9orf43-203ENST00000490544 ABCC9O60706 1549 aa32.52■■■□□ 2.8
C9orf43-203ENST00000490544 DCAF8L2P0C7V8 631 aa31.34■■■□□ 2.61
C9orf43-203ENST00000490544 RB1CC1Q8TDY2 1594 aa31.31■■■□□ 2.6
C9orf43-203ENST00000490544 NACADO15069 1562 aa31.24■■■□□ 2.59
C9orf43-203ENST00000490544 ZCCHC6Q5VYS8 1495 aaKnown RBP31.2■■■□□ 2.58
C9orf43-203ENST00000490544 MYO15BQ96JP2 1530 aa30.98■■■□□ 2.55
C9orf43-203ENST00000490544 DCAF1Q9Y4B6 1507 aa30.91■■■□□ 2.54
C9orf43-203ENST00000490544 DNAJC5BQ9UF47 199 aa30.79■■■□□ 2.52
C9orf43-203ENST00000490544 UNC13AQ9UPW8 1703 aa30.74■■■□□ 2.51
C9orf43-203ENST00000490544 SCRIBQ14160 1630 aa30.49■■■□□ 2.47
C9orf43-203ENST00000490544 PABPN1Q86U42 306 aaKnown RBP eCLIP30.37■■■□□ 2.45
C9orf43-203ENST00000490544 BICRAQ9NZM4 1560 aa30.32■■■□□ 2.44
C9orf43-203ENST00000490544 SHROOM4Q9ULL8 1493 aa29.93■■■□□ 2.38
C9orf43-203ENST00000490544 EIF4G1Q04637 1599 aaKnown RBP29.54■■■□□ 2.32
C9orf43-203ENST00000490544 CC2D2AQ9P2K1 1620 aa29.44■■■□□ 2.3
C9orf43-203ENST00000490544 CECR2Q9BXF3 1484 aa29.22■■■□□ 2.27
C9orf43-203ENST00000490544 SMARCA4P51532 1647 aa29.1■■■□□ 2.25
C9orf43-203ENST00000490544 BAZ1AQ9NRL2 1556 aaPredicted RBP29.05■■■□□ 2.24
C9orf43-203ENST00000490544 MROH2BQ7Z745 1585 aa28.88■■■□□ 2.21
C9orf43-203ENST00000490544 SMARCA2P51531 1590 aa28.85■■■□□ 2.21
C9orf43-203ENST00000490544 ATAD2BQ9ULI0 1458 aa28.83■■■□□ 2.21
C9orf43-203ENST00000490544 DNAJC5Q9H3Z4 198 aa28.8■■■□□ 2.2
C9orf43-203ENST00000490544 NCAPD3P42695 1498 aa28.75■■■□□ 2.19
C9orf43-203ENST00000490544 PEG3Q9GZU2 1588 aa28.71■■■□□ 2.19
C9orf43-203ENST00000490544 HMGXB3Q12766 1538 aa28.7■■■□□ 2.19
C9orf43-203ENST00000490544 BAZ1BQ9UIG0 1483 aaKnown RBP28.67■■■□□ 2.18
C9orf43-203ENST00000490544 WIZO95785 1651 aa28.66■■■□□ 2.18
C9orf43-203ENST00000490544 RSF1Q96T23 1441 aaPredicted RBP28.52■■■□□ 2.16
C9orf43-203ENST00000490544 TOP2AP11388 1531 aaKnown RBP28.29■■■□□ 2.12
C9orf43-203ENST00000490544 NESP48681 1621 aa28.16■■■□□ 2.1
C9orf43-203ENST00000490544 CUX2O14529 1486 aa28.15■■■□□ 2.1
C9orf43-203ENST00000490544 LAMC3Q9Y6N6 1575 aa28.08■■■□□ 2.09
C9orf43-203ENST00000490544 ERCC6Q03468 1493 aa28.06■■■□□ 2.08
C9orf43-203ENST00000490544 SUPT5HO00267 1087 aaKnown RBP27.97■■■□□ 2.07
C9orf43-203ENST00000490544 CADPSQ9ULU8 1353 aa27.94■■■□□ 2.06
C9orf43-203ENST00000490544 KIF21AQ7Z4S6 1674 aa27.94■■■□□ 2.06
C9orf43-203ENST00000490544 CCDC88BA6NC98 1476 aa27.92■■■□□ 2.06
C9orf43-203ENST00000490544 PDS5BQ9NTI5 1447 aa27.85■■■□□ 2.05
C9orf43-203ENST00000490544 PRDM2Q13029 1718 aa27.84■■■□□ 2.05
C9orf43-203ENST00000490544 CFTRP13569 1480 aa27.8■■■□□ 2.04
C9orf43-203ENST00000490544 THOC2Q8NI27 1593 aaKnown RBP27.73■■■□□ 2.03
C9orf43-203ENST00000490544 FANCD2Q9BXW9 1451 aa27.7■■■□□ 2.02
C9orf43-203ENST00000490544 CEP164Q9UPV0 1460 aa27.68■■■□□ 2.02
C9orf43-203ENST00000490544 MRC2Q9UBG0 1479 aa27.59■■■□□ 2.01
C9orf43-203ENST00000490544 WDR62O43379 1518 aa27.5■■□□□ 1.99
C9orf43-203ENST00000490544 URB2Q14146 1524 aaKnown RBP27.41■■□□□ 1.98
C9orf43-203ENST00000490544 TRIM41Q8WV44 630 aa27.38■■□□□ 1.97
C9orf43-203ENST00000490544 DNMBPQ6XZF7 1577 aa27.26■■□□□ 1.96
C9orf43-203ENST00000490544 TOPBP1Q92547 1522 aa27.26■■□□□ 1.96
C9orf43-203ENST00000490544 ABCC8Q09428 1581 aa27.22■■□□□ 1.95
C9orf43-203ENST00000490544 CUX1P39880 1505 aa27.1■■□□□ 1.93
C9orf43-203ENST00000490544 IFT140Q96RY7 1462 aa27.05■■□□□ 1.92
C9orf43-203ENST00000490544 POLA1P09884 1462 aaPredicted RBP27.02■■□□□ 1.92
C9orf43-203ENST00000490544 FGD5Q6ZNL6 1462 aa27■■□□□ 1.91
C9orf43-203ENST00000490544 TARBP1Q13395 1621 aaKnown RBP26.98■■□□□ 1.91
C9orf43-203ENST00000490544 ZNF608Q9ULD9 1512 aaPredicted RBP26.95■■□□□ 1.9
C9orf43-203ENST00000490544 SYNJ1O43426 1573 aa26.93■■□□□ 1.9
C9orf43-203ENST00000490544 WRNQ14191 1432 aaPredicted RBP eCLIP26.93■■□□□ 1.9
C9orf43-203ENST00000490544 BIVM-ERCC5R4GMW8 1640 aa26.93■■□□□ 1.9
C9orf43-203ENST00000490544 RAD54L2Q9Y4B4 1467 aa26.93■■□□□ 1.9
C9orf43-203ENST00000490544 EIF4G3O43432 1585 aaKnown RBP26.92■■□□□ 1.9
C9orf43-203ENST00000490544 SOGA1O94964 1423 aa26.9■■□□□ 1.9
C9orf43-203ENST00000490544 TOP2BQ02880 1626 aa26.9■■□□□ 1.9
C9orf43-203ENST00000490544 WDR97A6NE52 1622 aa26.84■■□□□ 1.89
C9orf43-203ENST00000490544 AQRO60306 1485 aaKnown RBP eCLIP26.8■■□□□ 1.88
C9orf43-203ENST00000490544 OSCARQ8IYS5 282 aa26.77■■□□□ 1.88
C9orf43-203ENST00000490544 TDRD9Q8NDG6 1382 aaKnown RBP26.75■■□□□ 1.87
C9orf43-203ENST00000490544 PBRM1Q86U86 1689 aa26.71■■□□□ 1.87
C9orf43-203ENST00000490544 ABCA10Q8WWZ4 1543 aa26.7■■□□□ 1.86
C9orf43-203ENST00000490544 ABCA5Q8WWZ7 1642 aa26.65■■□□□ 1.86
C9orf43-203ENST00000490544 CHD1O14646 1710 aa26.64■■□□□ 1.85
C9orf43-203ENST00000490544 GAPVD1Q14C86 1478 aa26.62■■□□□ 1.85
C9orf43-203ENST00000490544 GRIN2BQ13224 1484 aa26.59■■□□□ 1.85
C9orf43-203ENST00000490544 SNAPC4Q5SXM2 1469 aa26.59■■□□□ 1.85
C9orf43-203ENST00000490544 FBLN2P98095 1184 aa26.52■■□□□ 1.84
C9orf43-203ENST00000490544 MAGI1Q96QZ7 1491 aaPredicted RBP26.51■■□□□ 1.83
C9orf43-203ENST00000490544 RIMBP3CA6NJZ7 1639 aa26.43■■□□□ 1.82
C9orf43-203ENST00000490544 RIMBP3BA6NNM3 1639 aa26.43■■□□□ 1.82
C9orf43-203ENST00000490544 RIMBP3Q9UFD9 1639 aa26.43■■□□□ 1.82
C9orf43-203ENST00000490544 SYNJ2O15056 1496 aa26.41■■□□□ 1.82
C9orf43-203ENST00000490544 ADAMTS12P58397 1594 aa26.41■■□□□ 1.82
C9orf43-203ENST00000490544 CHMP7Q8WUX9 453 aaPredicted RBP26.4■■□□□ 1.82
C9orf43-203ENST00000490544 ERICH3Q5RHP9 1530 aa26.39■■□□□ 1.82
C9orf43-203ENST00000490544 KIF27Q86VH2 1401 aa26.36■■□□□ 1.81
C9orf43-203ENST00000490544 ARHGEF11O15085 1522 aa26.32■■□□□ 1.8
C9orf43-203ENST00000490544 FHAD1B1AJZ9 1412 aa26.28■■□□□ 1.8
C9orf43-203ENST00000490544 CUL7Q14999 1698 aa26.26■■□□□ 1.79
C9orf43-203ENST00000490544 GRIN2AQ12879 1464 aa26.26■■□□□ 1.79
C9orf43-203ENST00000490544 CLASP1Q7Z460 1538 aa26.2■■□□□ 1.79
C9orf43-203ENST00000490544 CYB5RLQ6IPT4 315 aa26.19■■□□□ 1.78
C9orf43-203ENST00000490544 CEP170Q5SW79 1584 aa26.17■■□□□ 1.78
C9orf43-203ENST00000490544 TRHP20396 242 aaPredicted RBP26.17■■□□□ 1.78
C9orf43-203ENST00000490544 RUSC2Q8N2Y8 1516 aa26.17■■□□□ 1.78
C9orf43-203ENST00000490544 IGF1RP08069 1367 aa26.17■■□□□ 1.78
C9orf43-203ENST00000490544 NUP160Q12769 1436 aa26.08■■□□□ 1.77
C9orf43-203ENST00000490544 CARMIL1Q5VZK9 1371 aa26.07■■□□□ 1.76
C9orf43-203ENST00000490544 CHIC1Q5VXU3 224 aa26.05■■□□□ 1.76
C9orf43-203ENST00000490544 ARAP1Q96P48 1450 aa26.01■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms