RNA–Protein interactions for RNA: ENST00000490520.1

CALB2-204, Transcript of calbindin 2, humanhuman

TSL 3

Gene CALB2, Length 472 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALB2-204ENST00000490520 NISCHQ9Y2I1 1504 aa28.54■■■□□ 2.16
CALB2-204ENST00000490520 CCDC180Q9P1Z9 1646 aa25.75■■□□□ 1.71
CALB2-204ENST00000490520 ABCC9O60706 1549 aa25.68■■□□□ 1.7
CALB2-204ENST00000490520 RB1CC1Q8TDY2 1594 aa24.44■■□□□ 1.5
CALB2-204ENST00000490520 NACADO15069 1562 aa24.22■■□□□ 1.47
CALB2-204ENST00000490520 UNC13AQ9UPW8 1703 aa24.09■■□□□ 1.45
CALB2-204ENST00000490520 DCAF8L2P0C7V8 631 aa24.02■■□□□ 1.44
CALB2-204ENST00000490520 DNAJC5BQ9UF47 199 aa23.95■■□□□ 1.42
CALB2-204ENST00000490520 MYO15BQ96JP2 1530 aa23.81■■□□□ 1.4
CALB2-204ENST00000490520 PABPN1Q86U42 306 aaKnown RBP eCLIP23.81■■□□□ 1.4
CALB2-204ENST00000490520 BICRAQ9NZM4 1560 aa23.75■■□□□ 1.39
CALB2-204ENST00000490520 ZCCHC6Q5VYS8 1495 aaKnown RBP23.69■■□□□ 1.38
CALB2-204ENST00000490520 DCAF1Q9Y4B6 1507 aa23.54■■□□□ 1.36
CALB2-204ENST00000490520 SCRIBQ14160 1630 aa23.5■■□□□ 1.35
CALB2-204ENST00000490520 SHROOM4Q9ULL8 1493 aa23.33■■□□□ 1.33
CALB2-204ENST00000490520 CC2D2AQ9P2K1 1620 aa23.23■■□□□ 1.31
CALB2-204ENST00000490520 EIF4G1Q04637 1599 aaKnown RBP23.16■■□□□ 1.3
CALB2-204ENST00000490520 CECR2Q9BXF3 1484 aa23.09■■□□□ 1.29
CALB2-204ENST00000490520 SMARCA4P51532 1647 aa22.36■■□□□ 1.17
CALB2-204ENST00000490520 NCAPD3P42695 1498 aa22.28■■□□□ 1.16
CALB2-204ENST00000490520 ATAD2BQ9ULI0 1458 aa22.27■■□□□ 1.16
CALB2-204ENST00000490520 SMARCA2P51531 1590 aa22.25■■□□□ 1.15
CALB2-204ENST00000490520 HMGXB3Q12766 1538 aa22.23■■□□□ 1.15
CALB2-204ENST00000490520 BAZ1AQ9NRL2 1556 aaPredicted RBP22.19■■□□□ 1.14
CALB2-204ENST00000490520 ERCC6Q03468 1493 aa22.16■■□□□ 1.14
CALB2-204ENST00000490520 BAZ1BQ9UIG0 1483 aaKnown RBP22.1■■□□□ 1.13
CALB2-204ENST00000490520 PEG3Q9GZU2 1588 aa22.08■■□□□ 1.12
CALB2-204ENST00000490520 NESP48681 1621 aa22.07■■□□□ 1.12
CALB2-204ENST00000490520 CUX2O14529 1486 aa22.07■■□□□ 1.12
CALB2-204ENST00000490520 MROH2BQ7Z745 1585 aa22.03■■□□□ 1.12
CALB2-204ENST00000490520 DNAJC5Q9H3Z4 198 aa21.94■■□□□ 1.1
CALB2-204ENST00000490520 KIF21AQ7Z4S6 1674 aa21.93■■□□□ 1.1
CALB2-204ENST00000490520 THOC2Q8NI27 1593 aaKnown RBP21.93■■□□□ 1.1
CALB2-204ENST00000490520 LAMC3Q9Y6N6 1575 aa21.9■■□□□ 1.1
CALB2-204ENST00000490520 WIZO95785 1651 aa21.85■■□□□ 1.09
CALB2-204ENST00000490520 PDS5BQ9NTI5 1447 aa21.66■■□□□ 1.06
CALB2-204ENST00000490520 CADPSQ9ULU8 1353 aa21.6■■□□□ 1.05
CALB2-204ENST00000490520 MRC2Q9UBG0 1479 aa21.57■■□□□ 1.04
CALB2-204ENST00000490520 WDR62O43379 1518 aa21.55■■□□□ 1.04
CALB2-204ENST00000490520 TOP2AP11388 1531 aaKnown RBP21.52■■□□□ 1.04
CALB2-204ENST00000490520 RSF1Q96T23 1441 aaPredicted RBP21.49■■□□□ 1.03
CALB2-204ENST00000490520 CEP164Q9UPV0 1460 aa21.49■■□□□ 1.03
CALB2-204ENST00000490520 PRDM2Q13029 1718 aa21.46■■□□□ 1.03
CALB2-204ENST00000490520 FANCD2Q9BXW9 1451 aa21.45■■□□□ 1.02
CALB2-204ENST00000490520 CFTRP13569 1480 aa21.39■■□□□ 1.01
CALB2-204ENST00000490520 URB2Q14146 1524 aaKnown RBP21.3■■□□□ 1
CALB2-204ENST00000490520 CCDC88BA6NC98 1476 aa21.2■□□□□ 0.98
CALB2-204ENST00000490520 TRIM41Q8WV44 630 aa21.1■□□□□ 0.97
CALB2-204ENST00000490520 TOPBP1Q92547 1522 aa21.05■□□□□ 0.96
CALB2-204ENST00000490520 ZNF608Q9ULD9 1512 aaPredicted RBP21.03■□□□□ 0.96
CALB2-204ENST00000490520 EIF4G3O43432 1585 aaKnown RBP21.02■□□□□ 0.96
CALB2-204ENST00000490520 DNMBPQ6XZF7 1577 aa21.02■□□□□ 0.95
CALB2-204ENST00000490520 IFT140Q96RY7 1462 aa21.01■□□□□ 0.95
CALB2-204ENST00000490520 CHD1O14646 1710 aa20.93■□□□□ 0.94
CALB2-204ENST00000490520 OSCARQ8IYS5 282 aa20.93■□□□□ 0.94
CALB2-204ENST00000490520 ABCC8Q09428 1581 aa20.92■□□□□ 0.94
CALB2-204ENST00000490520 RIMBP3CA6NJZ7 1639 aa20.92■□□□□ 0.94
CALB2-204ENST00000490520 RIMBP3BA6NNM3 1639 aa20.92■□□□□ 0.94
CALB2-204ENST00000490520 TARBP1Q13395 1621 aaKnown RBP20.92■□□□□ 0.94
CALB2-204ENST00000490520 RIMBP3Q9UFD9 1639 aa20.92■□□□□ 0.94
CALB2-204ENST00000490520 POLA1P09884 1462 aaPredicted RBP20.83■□□□□ 0.93
CALB2-204ENST00000490520 AQRO60306 1485 aaKnown RBP eCLIP20.79■□□□□ 0.92
CALB2-204ENST00000490520 ARHGEF11O15085 1522 aa20.78■□□□□ 0.92
CALB2-204ENST00000490520 RAD54L2Q9Y4B4 1467 aa20.76■□□□□ 0.91
CALB2-204ENST00000490520 FGD5Q6ZNL6 1462 aa20.73■□□□□ 0.91
CALB2-204ENST00000490520 CUX1P39880 1505 aa20.72■□□□□ 0.91
CALB2-204ENST00000490520 WDR97A6NE52 1622 aa20.71■□□□□ 0.91
CALB2-204ENST00000490520 PBRM1Q86U86 1689 aa20.67■□□□□ 0.9
CALB2-204ENST00000490520 SOGA1O94964 1423 aa20.66■□□□□ 0.9
CALB2-204ENST00000490520 SNAPC4Q5SXM2 1469 aa20.64■□□□□ 0.89
CALB2-204ENST00000490520 TDRD9Q8NDG6 1382 aaKnown RBP20.64■□□□□ 0.89
CALB2-204ENST00000490520 FBLN2P98095 1184 aa20.63■□□□□ 0.89
CALB2-204ENST00000490520 ARAP1Q96P48 1450 aa20.58■□□□□ 0.89
CALB2-204ENST00000490520 CLASP1Q7Z460 1538 aa20.56■□□□□ 0.88
CALB2-204ENST00000490520 MAGI1Q96QZ7 1491 aaPredicted RBP20.54■□□□□ 0.88
CALB2-204ENST00000490520 SYNJ1O43426 1573 aa20.54■□□□□ 0.88
CALB2-204ENST00000490520 SUPT5HO00267 1087 aaKnown RBP20.53■□□□□ 0.88
CALB2-204ENST00000490520 ABCA5Q8WWZ7 1642 aa20.53■□□□□ 0.88
CALB2-204ENST00000490520 GRIN2BQ13224 1484 aa20.52■□□□□ 0.88
CALB2-204ENST00000490520 CYB5RLQ6IPT4 315 aa20.5■□□□□ 0.87
CALB2-204ENST00000490520 SYNJ2O15056 1496 aa20.47■□□□□ 0.87
CALB2-204ENST00000490520 GAPVD1Q14C86 1478 aa20.46■□□□□ 0.87
CALB2-204ENST00000490520 BIVM-ERCC5R4GMW8 1640 aa20.45■□□□□ 0.86
CALB2-204ENST00000490520 ABCA10Q8WWZ4 1543 aa20.44■□□□□ 0.86
CALB2-204ENST00000490520 CHMP7Q8WUX9 453 aaPredicted RBP20.42■□□□□ 0.86
CALB2-204ENST00000490520 TOP2BQ02880 1626 aa20.39■□□□□ 0.86
CALB2-204ENST00000490520 ADAMTS12P58397 1594 aa20.38■□□□□ 0.85
CALB2-204ENST00000490520 WRNQ14191 1432 aaPredicted RBP eCLIP20.31■□□□□ 0.84
CALB2-204ENST00000490520 TRHP20396 242 aaPredicted RBP20.31■□□□□ 0.84
CALB2-204ENST00000490520 GRIN2AQ12879 1464 aa20.3■□□□□ 0.84
CALB2-204ENST00000490520 CEP170Q5SW79 1584 aa20.29■□□□□ 0.84
CALB2-204ENST00000490520 ERCC6L2Q5T890 1561 aa20.27■□□□□ 0.84
CALB2-204ENST00000490520 SHROOM2Q13796 1616 aa20.2■□□□□ 0.82
CALB2-204ENST00000490520 ERICH3Q5RHP9 1530 aa20.2■□□□□ 0.82
CALB2-204ENST00000490520 NUP160Q12769 1436 aa20.19■□□□□ 0.82
CALB2-204ENST00000490520 FHAD1B1AJZ9 1412 aa20.17■□□□□ 0.82
CALB2-204ENST00000490520 RUSC2Q8N2Y8 1516 aa20.11■□□□□ 0.81
CALB2-204ENST00000490520 KIF13AQ9H1H9 1805 aa20.03■□□□□ 0.8
CALB2-204ENST00000490520 CUL7Q14999 1698 aa20■□□□□ 0.79
CALB2-204ENST00000490520 PRG4Q92954 1404 aaPredicted RBP20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms