RNA–Protein interactions for RNA: ENST00000490514.5

TCTN1-215, Transcript of tectonic family member 1, humanhuman

TSL 2

Gene TCTN1, Length 1,874 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCTN1-215ENST00000490514 NISCHQ9Y2I1 1504 aa41.42■■■■■ 4.22
TCTN1-215ENST00000490514 CCDC180Q9P1Z9 1646 aa35.99■■■■□ 3.35
TCTN1-215ENST00000490514 ZCCHC6Q5VYS8 1495 aaKnown RBP34.82■■■■□ 3.16
TCTN1-215ENST00000490514 DCAF1Q9Y4B6 1507 aa34.19■■■■□ 3.06
TCTN1-215ENST00000490514 DCAF8L2P0C7V8 631 aa34.14■■■■□ 3.06
TCTN1-215ENST00000490514 ABCC9O60706 1549 aa34.13■■■■□ 3.05
TCTN1-215ENST00000490514 SHROOM4Q9ULL8 1493 aa33.9■■■■□ 3.02
TCTN1-215ENST00000490514 MYO15BQ96JP2 1530 aa33.74■■■□□ 2.99
TCTN1-215ENST00000490514 NACADO15069 1562 aa33.52■■■□□ 2.96
TCTN1-215ENST00000490514 SCRIBQ14160 1630 aa33.22■■■□□ 2.91
TCTN1-215ENST00000490514 RB1CC1Q8TDY2 1594 aa33.21■■■□□ 2.91
TCTN1-215ENST00000490514 UNC13AQ9UPW8 1703 aa32.66■■■□□ 2.82
TCTN1-215ENST00000490514 SUPT5HO00267 1087 aaKnown RBP32.56■■■□□ 2.8
TCTN1-215ENST00000490514 BICRAQ9NZM4 1560 aa32.4■■■□□ 2.78
TCTN1-215ENST00000490514 CECR2Q9BXF3 1484 aa32.29■■■□□ 2.76
TCTN1-215ENST00000490514 PABPN1Q86U42 306 aaKnown RBP eCLIP32.24■■■□□ 2.75
TCTN1-215ENST00000490514 RSF1Q96T23 1441 aaPredicted RBP32.2■■■□□ 2.75
TCTN1-215ENST00000490514 MROH2BQ7Z745 1585 aa32.08■■■□□ 2.73
TCTN1-215ENST00000490514 BAZ1AQ9NRL2 1556 aaPredicted RBP31.91■■■□□ 2.7
TCTN1-215ENST00000490514 SMARCA4P51532 1647 aa31.82■■■□□ 2.68
TCTN1-215ENST00000490514 WIZO95785 1651 aa31.78■■■□□ 2.68
TCTN1-215ENST00000490514 PEG3Q9GZU2 1588 aa31.42■■■□□ 2.62
TCTN1-215ENST00000490514 TOP2AP11388 1531 aaKnown RBP31.39■■■□□ 2.62
TCTN1-215ENST00000490514 EIF4G1Q04637 1599 aaKnown RBP31.33■■■□□ 2.61
TCTN1-215ENST00000490514 ATAD2BQ9ULI0 1458 aa31.32■■■□□ 2.6
TCTN1-215ENST00000490514 CHIC1Q5VXU3 224 aa31.24■■■□□ 2.59
TCTN1-215ENST00000490514 SMARCA2P51531 1590 aa31.18■■■□□ 2.58
TCTN1-215ENST00000490514 CCDC88BA6NC98 1476 aa31.14■■■□□ 2.57
TCTN1-215ENST00000490514 BAZ1BQ9UIG0 1483 aaKnown RBP31.08■■■□□ 2.57
TCTN1-215ENST00000490514 NCAPD3P42695 1498 aa31.01■■■□□ 2.55
TCTN1-215ENST00000490514 HMGXB3Q12766 1538 aa30.93■■■□□ 2.54
TCTN1-215ENST00000490514 CC2D2AQ9P2K1 1620 aa30.86■■■□□ 2.53
TCTN1-215ENST00000490514 TRIM41Q8WV44 630 aa30.53■■■□□ 2.48
TCTN1-215ENST00000490514 ABCC8Q09428 1581 aa30.52■■■□□ 2.48
TCTN1-215ENST00000490514 CFTRP13569 1480 aa30.34■■■□□ 2.45
TCTN1-215ENST00000490514 DNAJC5BQ9UF47 199 aa30.33■■■□□ 2.45
TCTN1-215ENST00000490514 WRNQ14191 1432 aaPredicted RBP eCLIP30.23■■■□□ 2.43
TCTN1-215ENST00000490514 CADPSQ9ULU8 1353 aa30.21■■■□□ 2.43
TCTN1-215ENST00000490514 SYNJ1O43426 1573 aa30.19■■■□□ 2.42
TCTN1-215ENST00000490514 LOC105371045A0A1W2PR82 267 aa30.1■■■□□ 2.41
TCTN1-215ENST00000490514 FAM9AQ8IZU1 332 aaPredicted RBP30.08■■■□□ 2.41
TCTN1-215ENST00000490514 PRDM2Q13029 1718 aa30.08■■■□□ 2.41
TCTN1-215ENST00000490514 NESP48681 1621 aa30.04■■■□□ 2.4
TCTN1-215ENST00000490514 TOP2BQ02880 1626 aa29.98■■■□□ 2.39
TCTN1-215ENST00000490514 SOGA1O94964 1423 aa29.98■■■□□ 2.39
TCTN1-215ENST00000490514 CUX1P39880 1505 aa29.97■■■□□ 2.39
TCTN1-215ENST00000490514 BIVM-ERCC5R4GMW8 1640 aa29.95■■■□□ 2.38
TCTN1-215ENST00000490514 RUSC2Q8N2Y8 1516 aa29.9■■■□□ 2.38
TCTN1-215ENST00000490514 FANCD2Q9BXW9 1451 aa29.88■■■□□ 2.37
TCTN1-215ENST00000490514 LAMC3Q9Y6N6 1575 aa29.88■■■□□ 2.37
TCTN1-215ENST00000490514 EEA1Q15075 1411 aa29.71■■■□□ 2.35
TCTN1-215ENST00000490514 EHMT2Q96KQ7 1210 aa29.7■■■□□ 2.34
TCTN1-215ENST00000490514 CEP164Q9UPV0 1460 aa29.64■■■□□ 2.34
TCTN1-215ENST00000490514 CSRNP3Q8WYN3 585 aa29.63■■■□□ 2.33
TCTN1-215ENST00000490514 PDS5BQ9NTI5 1447 aa29.62■■■□□ 2.33
TCTN1-215ENST00000490514 FGD5Q6ZNL6 1462 aa29.6■■■□□ 2.33
TCTN1-215ENST00000490514 DNMBPQ6XZF7 1577 aa29.59■■■□□ 2.33
TCTN1-215ENST00000490514 KIF21AQ7Z4S6 1674 aa29.59■■■□□ 2.33
TCTN1-215ENST00000490514 TOPBP1Q92547 1522 aa29.59■■■□□ 2.33
TCTN1-215ENST00000490514 URB2Q14146 1524 aaKnown RBP29.58■■■□□ 2.33
TCTN1-215ENST00000490514 POLA1P09884 1462 aaPredicted RBP29.46■■■□□ 2.31
TCTN1-215ENST00000490514 KIF27Q86VH2 1401 aa29.41■■■□□ 2.3
TCTN1-215ENST00000490514 KIF21BO75037 1637 aa29.41■■■□□ 2.3
TCTN1-215ENST00000490514 RAD54L2Q9Y4B4 1467 aa29.41■■■□□ 2.3
TCTN1-215ENST00000490514 CUX2O14529 1486 aa29.39■■■□□ 2.3
TCTN1-215ENST00000490514 GOLGA3Q08378 1498 aa29.37■■■□□ 2.29
TCTN1-215ENST00000490514 RAPGEF2Q9Y4G8 1499 aa29.34■■■□□ 2.29
TCTN1-215ENST00000490514 PRXQ9BXM0 1461 aa29.33■■■□□ 2.29
TCTN1-215ENST00000490514 TNIKQ9UKE5 1360 aa29.31■■■□□ 2.28
TCTN1-215ENST00000490514 ABCA10Q8WWZ4 1543 aa29.31■■■□□ 2.28
TCTN1-215ENST00000490514 MRC2Q9UBG0 1479 aa29.3■■■□□ 2.28
TCTN1-215ENST00000490514 IGF1RP08069 1367 aa29.26■■■□□ 2.27
TCTN1-215ENST00000490514 WDR97A6NE52 1622 aa29.23■■■□□ 2.27
TCTN1-215ENST00000490514 UBTFP17480 764 aaKnown RBP29.21■■■□□ 2.27
TCTN1-215ENST00000490514 CEP162Q5TB80 1403 aa29.2■■■□□ 2.26
TCTN1-215ENST00000490514 ERICH3Q5RHP9 1530 aa29.19■■■□□ 2.26
TCTN1-215ENST00000490514 WDR62O43379 1518 aa29.18■■■□□ 2.26
TCTN1-215ENST00000490514 TARBP1Q13395 1621 aaKnown RBP29.16■■■□□ 2.26
TCTN1-215ENST00000490514 ERCC6Q03468 1493 aa29.14■■■□□ 2.26
TCTN1-215ENST00000490514 THOC2Q8NI27 1593 aaKnown RBP29.11■■■□□ 2.25
TCTN1-215ENST00000490514 TDRD9Q8NDG6 1382 aaKnown RBP29.09■■■□□ 2.25
TCTN1-215ENST00000490514 ABCA5Q8WWZ7 1642 aa29.09■■■□□ 2.25
TCTN1-215ENST00000490514 CARMIL1Q5VZK9 1371 aa29.04■■■□□ 2.24
TCTN1-215ENST00000490514 GAPVD1Q14C86 1478 aa28.99■■■□□ 2.23
TCTN1-215ENST00000490514 CLIP1P30622 1438 aa28.94■■■□□ 2.22
TCTN1-215ENST00000490514 IFT140Q96RY7 1462 aa28.93■■■□□ 2.22
TCTN1-215ENST00000490514 ZNF608Q9ULD9 1512 aaPredicted RBP28.92■■■□□ 2.22
TCTN1-215ENST00000490514 AQRO60306 1485 aaKnown RBP eCLIP28.91■■■□□ 2.22
TCTN1-215ENST00000490514 CUL7Q14999 1698 aa28.89■■■□□ 2.22
TCTN1-215ENST00000490514 RANGAP1P46060 587 aaPredicted RBP28.82■■■□□ 2.2
TCTN1-215ENST00000490514 PBRM1Q86U86 1689 aa28.81■■■□□ 2.2
TCTN1-215ENST00000490514 GRIN2BQ13224 1484 aa28.74■■■□□ 2.19
TCTN1-215ENST00000490514 ARAP1Q96P48 1450 aa28.74■■■□□ 2.19
TCTN1-215ENST00000490514 EIF4G3O43432 1585 aaKnown RBP28.73■■■□□ 2.19
TCTN1-215ENST00000490514 ARHGAP35Q9NRY4 1499 aa28.7■■■□□ 2.19
TCTN1-215ENST00000490514 ADAMTS12P58397 1594 aa28.7■■■□□ 2.19
TCTN1-215ENST00000490514 PPARGC1BQ86YN6 1023 aaKnown RBP28.68■■■□□ 2.18
TCTN1-215ENST00000490514 VPS8Q8N3P4 1428 aa28.68■■■□□ 2.18
TCTN1-215ENST00000490514 FHAD1B1AJZ9 1412 aa28.66■■■□□ 2.18
TCTN1-215ENST00000490514 PCGF6Q9BYE7 350 aa28.65■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms