RNA–Protein interactions for RNA: ENST00000490406.1

SERBP1-207, Transcript of SERPINE1 mRNA binding protein 1, humanhuman

TSL 5

Gene SERBP1, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERBP1-207ENST00000490406 NISCHQ9Y2I1 1504 aa29.86■■■□□ 2.37
SERBP1-207ENST00000490406 ABCC9O60706 1549 aa28.06■■■□□ 2.08
SERBP1-207ENST00000490406 CCDC180Q9P1Z9 1646 aa27.14■■□□□ 1.94
SERBP1-207ENST00000490406 DNAJC5BQ9UF47 199 aa27.11■■□□□ 1.93
SERBP1-207ENST00000490406 RB1CC1Q8TDY2 1594 aa26.39■■□□□ 1.82
SERBP1-207ENST00000490406 PABPN1Q86U42 306 aaKnown RBP eCLIP26.06■■□□□ 1.76
SERBP1-207ENST00000490406 NACADO15069 1562 aa26■■□□□ 1.75
SERBP1-207ENST00000490406 DCAF8L2P0C7V8 631 aa25.87■■□□□ 1.73
SERBP1-207ENST00000490406 DNAJC5Q9H3Z4 198 aa25.78■■□□□ 1.72
SERBP1-207ENST00000490406 UNC13AQ9UPW8 1703 aa25.49■■□□□ 1.67
SERBP1-207ENST00000490406 BICRAQ9NZM4 1560 aa25.44■■□□□ 1.66
SERBP1-207ENST00000490406 CECR2Q9BXF3 1484 aa25.44■■□□□ 1.66
SERBP1-207ENST00000490406 MYO15BQ96JP2 1530 aa25.36■■□□□ 1.65
SERBP1-207ENST00000490406 SHROOM4Q9ULL8 1493 aa25.27■■□□□ 1.64
SERBP1-207ENST00000490406 CC2D2AQ9P2K1 1620 aa25.26■■□□□ 1.63
SERBP1-207ENST00000490406 EIF4G1Q04637 1599 aaKnown RBP25■■□□□ 1.59
SERBP1-207ENST00000490406 CUX2O14529 1486 aa24.68■■□□□ 1.54
SERBP1-207ENST00000490406 DCAF1Q9Y4B6 1507 aa24.66■■□□□ 1.54
SERBP1-207ENST00000490406 SCRIBQ14160 1630 aa24.64■■□□□ 1.53
SERBP1-207ENST00000490406 ZCCHC6Q5VYS8 1495 aaKnown RBP24.48■■□□□ 1.51
SERBP1-207ENST00000490406 ERCC6Q03468 1493 aa24.44■■□□□ 1.5
SERBP1-207ENST00000490406 TRIM41Q8WV44 630 aa24.25■■□□□ 1.47
SERBP1-207ENST00000490406 NCAPD3P42695 1498 aa24.03■■□□□ 1.44
SERBP1-207ENST00000490406 NESP48681 1621 aa23.77■■□□□ 1.4
SERBP1-207ENST00000490406 ATAD2BQ9ULI0 1458 aa23.75■■□□□ 1.39
SERBP1-207ENST00000490406 SMARCA2P51531 1590 aa23.71■■□□□ 1.39
SERBP1-207ENST00000490406 HMGXB3Q12766 1538 aa23.68■■□□□ 1.38
SERBP1-207ENST00000490406 THOC2Q8NI27 1593 aaKnown RBP23.65■■□□□ 1.38
SERBP1-207ENST00000490406 PDS5BQ9NTI5 1447 aa23.64■■□□□ 1.37
SERBP1-207ENST00000490406 LAMC3Q9Y6N6 1575 aa23.6■■□□□ 1.37
SERBP1-207ENST00000490406 OSCARQ8IYS5 282 aa23.58■■□□□ 1.37
SERBP1-207ENST00000490406 BAZ1BQ9UIG0 1483 aaKnown RBP23.52■■□□□ 1.36
SERBP1-207ENST00000490406 SMARCA4P51532 1647 aa23.41■■□□□ 1.34
SERBP1-207ENST00000490406 KIF21AQ7Z4S6 1674 aa23.36■■□□□ 1.33
SERBP1-207ENST00000490406 MRC2Q9UBG0 1479 aa23.34■■□□□ 1.33
SERBP1-207ENST00000490406 BAZ1AQ9NRL2 1556 aaPredicted RBP23.31■■□□□ 1.32
SERBP1-207ENST00000490406 CADPSQ9ULU8 1353 aa23.29■■□□□ 1.32
SERBP1-207ENST00000490406 AEBP2Q6ZN18 517 aaPredicted RBP23.24■■□□□ 1.31
SERBP1-207ENST00000490406 WDR62O43379 1518 aa23.23■■□□□ 1.31
SERBP1-207ENST00000490406 PEG3Q9GZU2 1588 aa23.23■■□□□ 1.31
SERBP1-207ENST00000490406 TRHP20396 242 aaPredicted RBP23.14■■□□□ 1.29
SERBP1-207ENST00000490406 CEP164Q9UPV0 1460 aa23.09■■□□□ 1.29
SERBP1-207ENST00000490406 RIMBP3CA6NJZ7 1639 aa23.03■■□□□ 1.28
SERBP1-207ENST00000490406 RIMBP3BA6NNM3 1639 aa23.03■■□□□ 1.28
SERBP1-207ENST00000490406 RIMBP3Q9UFD9 1639 aa23.03■■□□□ 1.28
SERBP1-207ENST00000490406 CYB5RLQ6IPT4 315 aa23.01■■□□□ 1.27
SERBP1-207ENST00000490406 FANCD2Q9BXW9 1451 aa22.96■■□□□ 1.27
SERBP1-207ENST00000490406 ARHGEF11O15085 1522 aa22.92■■□□□ 1.26
SERBP1-207ENST00000490406 MROH2BQ7Z745 1585 aa22.91■■□□□ 1.26
SERBP1-207ENST00000490406 CFTRP13569 1480 aa22.76■■□□□ 1.23
SERBP1-207ENST00000490406 URB2Q14146 1524 aaKnown RBP22.72■■□□□ 1.23
SERBP1-207ENST00000490406 IFT140Q96RY7 1462 aa22.69■■□□□ 1.22
SERBP1-207ENST00000490406 RSF1Q96T23 1441 aaPredicted RBP22.6■■□□□ 1.21
SERBP1-207ENST00000490406 ARAP1Q96P48 1450 aa22.6■■□□□ 1.21
SERBP1-207ENST00000490406 FBLN2P98095 1184 aa22.59■■□□□ 1.21
SERBP1-207ENST00000490406 ZNF608Q9ULD9 1512 aaPredicted RBP22.58■■□□□ 1.21
SERBP1-207ENST00000490406 WIZO95785 1651 aa22.55■■□□□ 1.2
SERBP1-207ENST00000490406 ABCC8Q09428 1581 aa22.47■■□□□ 1.19
SERBP1-207ENST00000490406 EIF4G3O43432 1585 aaKnown RBP22.38■■□□□ 1.17
SERBP1-207ENST00000490406 TOPBP1Q92547 1522 aa22.37■■□□□ 1.17
SERBP1-207ENST00000490406 AQRO60306 1485 aaKnown RBP eCLIP22.35■■□□□ 1.174e-8■■■□□ 17.6
SERBP1-207ENST00000490406 CHD1O14646 1710 aa22.34■■□□□ 1.17
SERBP1-207ENST00000490406 CHMP7Q8WUX9 453 aaPredicted RBP22.31■■□□□ 1.16
SERBP1-207ENST00000490406 TOP2AP11388 1531 aaKnown RBP22.29■■□□□ 1.16
SERBP1-207ENST00000490406 PRDM2Q13029 1718 aa22.28■■□□□ 1.16
SERBP1-207ENST00000490406 DNMBPQ6XZF7 1577 aa22.21■■□□□ 1.15
SERBP1-207ENST00000490406 SYNJ1O43426 1573 aa22.18■■□□□ 1.14
SERBP1-207ENST00000490406 TARBP1Q13395 1621 aaKnown RBP22.16■■□□□ 1.14
SERBP1-207ENST00000490406 ILDR1Q86SU0 546 aaPredicted RBP22.14■■□□□ 1.13
SERBP1-207ENST00000490406 CLASP1Q7Z460 1538 aa22.12■■□□□ 1.13
SERBP1-207ENST00000490406 TDRD9Q8NDG6 1382 aaKnown RBP22.12■■□□□ 1.13
SERBP1-207ENST00000490406 GAPVD1Q14C86 1478 aa22.1■■□□□ 1.13
SERBP1-207ENST00000490406 SOGA1O94964 1423 aa22.1■■□□□ 1.13
SERBP1-207ENST00000490406 CCDC88BA6NC98 1476 aa22.09■■□□□ 1.13
SERBP1-207ENST00000490406 POLA1P09884 1462 aaPredicted RBP22.07■■□□□ 1.12
SERBP1-207ENST00000490406 SNAPC4Q5SXM2 1469 aa22.06■■□□□ 1.12
SERBP1-207ENST00000490406 MAGI1Q96QZ7 1491 aaPredicted RBP22.06■■□□□ 1.12
SERBP1-207ENST00000490406 WDR97A6NE52 1622 aa22.03■■□□□ 1.12
SERBP1-207ENST00000490406 SYNJ2O15056 1496 aa21.99■■□□□ 1.11
SERBP1-207ENST00000490406 RAD54L2Q9Y4B4 1467 aa21.99■■□□□ 1.11
SERBP1-207ENST00000490406 GRIN2BQ13224 1484 aa21.98■■□□□ 1.11
SERBP1-207ENST00000490406 NPM1P06748 294 aaKnown RBP eCLIP21.83■■□□□ 1.09
SERBP1-207ENST00000490406 KDM4FA0A1W2PPD8 638 aa21.81■■□□□ 1.08
SERBP1-207ENST00000490406 FGD5Q6ZNL6 1462 aa21.8■■□□□ 1.08
SERBP1-207ENST00000490406 FAM69CQ0P6D2 419 aa21.8■■□□□ 1.08
SERBP1-207ENST00000490406 KIF13AQ9H1H9 1805 aa21.66■■□□□ 1.06
SERBP1-207ENST00000490406 ABCC10Q5T3U5 1492 aa21.64■■□□□ 1.06
SERBP1-207ENST00000490406 CEP170Q5SW79 1584 aa21.64■■□□□ 1.05
SERBP1-207ENST00000490406 GRIN2AQ12879 1464 aa21.63■■□□□ 1.05
SERBP1-207ENST00000490406 ERCC6L2Q5T890 1561 aa21.62■■□□□ 1.05
SERBP1-207ENST00000490406 PBRM1Q86U86 1689 aa21.62■■□□□ 1.05
SERBP1-207ENST00000490406 NUP160Q12769 1436 aa21.59■■□□□ 1.05
SERBP1-207ENST00000490406 CUX1P39880 1505 aa21.58■■□□□ 1.04
SERBP1-207ENST00000490406 KDM6BO15054 1643 aa21.57■■□□□ 1.04
SERBP1-207ENST00000490406 JPH4Q96JJ6 628 aa21.56■■□□□ 1.04
SERBP1-207ENST00000490406 ABCA10Q8WWZ4 1543 aa21.55■■□□□ 1.04
SERBP1-207ENST00000490406 PRG4Q92954 1404 aaPredicted RBP21.52■■□□□ 1.04
SERBP1-207ENST00000490406 SHROOM2Q13796 1616 aa21.5■■□□□ 1.03
SERBP1-207ENST00000490406 MAPKBP1O60336 1514 aa21.5■■□□□ 1.03
SERBP1-207ENST00000490406 FHAD1B1AJZ9 1412 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms