RNA–Protein interactions for RNA: ENST00000490364.1

ACTL6A-212, Transcript of actin like 6A, humanhuman

TSL 3

Gene ACTL6A, Length 459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTL6A-212ENST00000490364 NISCHQ9Y2I1 1504 aa46.69■■■■■ 5.07
ACTL6A-212ENST00000490364 CCDC180Q9P1Z9 1646 aa41.62■■■■■ 4.25
ACTL6A-212ENST00000490364 ABCC9O60706 1549 aa40.88■■■■■ 4.14
ACTL6A-212ENST00000490364 RB1CC1Q8TDY2 1594 aa39.25■■■■□ 3.87
ACTL6A-212ENST00000490364 NACADO15069 1562 aa39.15■■■■□ 3.86
ACTL6A-212ENST00000490364 DCAF8L2P0C7V8 631 aa39.13■■■■□ 3.85
ACTL6A-212ENST00000490364 ZCCHC6Q5VYS8 1495 aaKnown RBP38.86■■■■□ 3.81
ACTL6A-212ENST00000490364 MYO15BQ96JP2 1530 aa38.82■■■■□ 3.8
ACTL6A-212ENST00000490364 DCAF1Q9Y4B6 1507 aa38.6■■■■□ 3.77
ACTL6A-212ENST00000490364 UNC13AQ9UPW8 1703 aa38.39■■■■□ 3.74
ACTL6A-212ENST00000490364 PABPN1Q86U42 306 aaKnown RBP eCLIP38.16■■■■□ 3.7
ACTL6A-212ENST00000490364 BICRAQ9NZM4 1560 aa38.04■■■■□ 3.68
ACTL6A-212ENST00000490364 SCRIBQ14160 1630 aa37.99■■■■□ 3.67
ACTL6A-212ENST00000490364 SHROOM4Q9ULL8 1493 aa37.62■■■■□ 3.61
ACTL6A-212ENST00000490364 DNAJC5BQ9UF47 199 aa37.61■■■■□ 3.61
ACTL6A-212ENST00000490364 EIF4G1Q04637 1599 aaKnown RBP37.07■■■■□ 3.52
ACTL6A-212ENST00000490364 CC2D2AQ9P2K1 1620 aa36.97■■■■□ 3.51
ACTL6A-212ENST00000490364 CECR2Q9BXF3 1484 aa36.74■■■■□ 3.47
ACTL6A-212ENST00000490364 SMARCA4P51532 1647 aa36.3■■■■□ 3.4
ACTL6A-212ENST00000490364 BAZ1AQ9NRL2 1556 aaPredicted RBP36.22■■■■□ 3.39
ACTL6A-212ENST00000490364 ATAD2BQ9ULI0 1458 aa36.11■■■■□ 3.37
ACTL6A-212ENST00000490364 NCAPD3P42695 1498 aa36.09■■■■□ 3.37
ACTL6A-212ENST00000490364 SMARCA2P51531 1590 aa36.08■■■■□ 3.37
ACTL6A-212ENST00000490364 MROH2BQ7Z745 1585 aa35.99■■■■□ 3.35
ACTL6A-212ENST00000490364 HMGXB3Q12766 1538 aa35.93■■■■□ 3.34
ACTL6A-212ENST00000490364 PEG3Q9GZU2 1588 aa35.9■■■■□ 3.34
ACTL6A-212ENST00000490364 BAZ1BQ9UIG0 1483 aaKnown RBP35.84■■■■□ 3.33
ACTL6A-212ENST00000490364 WIZO95785 1651 aa35.63■■■■□ 3.29
ACTL6A-212ENST00000490364 RSF1Q96T23 1441 aaPredicted RBP35.5■■■■□ 3.27
ACTL6A-212ENST00000490364 NESP48681 1621 aa35.32■■■■□ 3.24
ACTL6A-212ENST00000490364 ERCC6Q03468 1493 aa35.27■■■■□ 3.24
ACTL6A-212ENST00000490364 TOP2AP11388 1531 aaKnown RBP35.22■■■■□ 3.23
ACTL6A-212ENST00000490364 LAMC3Q9Y6N6 1575 aa35.21■■■■□ 3.23
ACTL6A-212ENST00000490364 CADPSQ9ULU8 1353 aa35.04■■■■□ 3.2
ACTL6A-212ENST00000490364 PDS5BQ9NTI5 1447 aa34.97■■■■□ 3.19
ACTL6A-212ENST00000490364 KIF21AQ7Z4S6 1674 aa34.94■■■■□ 3.18
ACTL6A-212ENST00000490364 CUX2O14529 1486 aa34.91■■■■□ 3.18
ACTL6A-212ENST00000490364 THOC2Q8NI27 1593 aaKnown RBP34.83■■■■□ 3.17
ACTL6A-212ENST00000490364 CFTRP13569 1480 aa34.8■■■■□ 3.16
ACTL6A-212ENST00000490364 CCDC88BA6NC98 1476 aa34.79■■■■□ 3.16
ACTL6A-212ENST00000490364 FANCD2Q9BXW9 1451 aa34.67■■■■□ 3.14
ACTL6A-212ENST00000490364 CEP164Q9UPV0 1460 aa34.66■■■■□ 3.14
ACTL6A-212ENST00000490364 MRC2Q9UBG0 1479 aa34.63■■■■□ 3.13
ACTL6A-212ENST00000490364 PRDM2Q13029 1718 aa34.61■■■■□ 3.13
ACTL6A-212ENST00000490364 SUPT5HO00267 1087 aaKnown RBP34.54■■■■□ 3.12
ACTL6A-212ENST00000490364 WDR62O43379 1518 aa34.51■■■■□ 3.12
ACTL6A-212ENST00000490364 URB2Q14146 1524 aaKnown RBP34.33■■■■□ 3.09
ACTL6A-212ENST00000490364 TOPBP1Q92547 1522 aa34.09■■■■□ 3.05
ACTL6A-212ENST00000490364 ABCC8Q09428 1581 aa34.07■■■■□ 3.05
ACTL6A-212ENST00000490364 DNMBPQ6XZF7 1577 aa34.06■■■■□ 3.04
ACTL6A-212ENST00000490364 DNAJC5Q9H3Z4 198 aa34.01■■■■□ 3.03
ACTL6A-212ENST00000490364 IFT140Q96RY7 1462 aa33.92■■■■□ 3.02
ACTL6A-212ENST00000490364 POLA1P09884 1462 aaPredicted RBP33.79■■■■□ 3
ACTL6A-212ENST00000490364 CUX1P39880 1505 aa33.79■■■■□ 3
ACTL6A-212ENST00000490364 ZNF608Q9ULD9 1512 aaPredicted RBP33.78■■■■□ 3
ACTL6A-212ENST00000490364 TARBP1Q13395 1621 aaKnown RBP33.74■■■□□ 2.99
ACTL6A-212ENST00000490364 FGD5Q6ZNL6 1462 aa33.7■■■□□ 2.99
ACTL6A-212ENST00000490364 EIF4G3O43432 1585 aaKnown RBP33.68■■■□□ 2.98
ACTL6A-212ENST00000490364 RAD54L2Q9Y4B4 1467 aa33.65■■■□□ 2.98
ACTL6A-212ENST00000490364 SOGA1O94964 1423 aa33.65■■■□□ 2.98
ACTL6A-212ENST00000490364 AQRO60306 1485 aaKnown RBP eCLIP33.56■■■□□ 2.96
ACTL6A-212ENST00000490364 WRNQ14191 1432 aaPredicted RBP eCLIP33.51■■■□□ 2.95
ACTL6A-212ENST00000490364 TDRD9Q8NDG6 1382 aaKnown RBP33.48■■■□□ 2.95
ACTL6A-212ENST00000490364 WDR97A6NE52 1622 aa33.46■■■□□ 2.95
ACTL6A-212ENST00000490364 BIVM-ERCC5R4GMW8 1640 aa33.46■■■□□ 2.95
ACTL6A-212ENST00000490364 TOP2BQ02880 1626 aa33.46■■■□□ 2.95
ACTL6A-212ENST00000490364 SYNJ1O43426 1573 aa33.45■■■□□ 2.95
ACTL6A-212ENST00000490364 OSCARQ8IYS5 282 aa33.44■■■□□ 2.94
ACTL6A-212ENST00000490364 ABCA10Q8WWZ4 1543 aa33.34■■■□□ 2.93
ACTL6A-212ENST00000490364 CHD1O14646 1710 aa33.31■■■□□ 2.92
ACTL6A-212ENST00000490364 GRIN2BQ13224 1484 aa33.28■■■□□ 2.92
ACTL6A-212ENST00000490364 GAPVD1Q14C86 1478 aa33.27■■■□□ 2.92
ACTL6A-212ENST00000490364 SNAPC4Q5SXM2 1469 aa33.27■■■□□ 2.92
ACTL6A-212ENST00000490364 PBRM1Q86U86 1689 aa33.26■■■□□ 2.91
ACTL6A-212ENST00000490364 ABCA5Q8WWZ7 1642 aa33.25■■■□□ 2.91
ACTL6A-212ENST00000490364 FBLN2P98095 1184 aa33.24■■■□□ 2.91
ACTL6A-212ENST00000490364 MAGI1Q96QZ7 1491 aaPredicted RBP33.21■■■□□ 2.91
ACTL6A-212ENST00000490364 CHMP7Q8WUX9 453 aaPredicted RBP33.1■■■□□ 2.89
ACTL6A-212ENST00000490364 SYNJ2O15056 1496 aa33.09■■■□□ 2.89
ACTL6A-212ENST00000490364 ERICH3Q5RHP9 1530 aa32.96■■■□□ 2.87
ACTL6A-212ENST00000490364 RIMBP3CA6NJZ7 1639 aa32.95■■■□□ 2.87
ACTL6A-212ENST00000490364 RIMBP3BA6NNM3 1639 aa32.95■■■□□ 2.87
ACTL6A-212ENST00000490364 RIMBP3Q9UFD9 1639 aa32.95■■■□□ 2.87
ACTL6A-212ENST00000490364 ADAMTS12P58397 1594 aa32.95■■■□□ 2.86
ACTL6A-212ENST00000490364 ARHGEF11O15085 1522 aa32.92■■■□□ 2.86
ACTL6A-212ENST00000490364 TRIM41Q8WV44 630 aa32.89■■■□□ 2.86
ACTL6A-212ENST00000490364 CLASP1Q7Z460 1538 aa32.88■■■□□ 2.85
ACTL6A-212ENST00000490364 FHAD1B1AJZ9 1412 aa32.86■■■□□ 2.85
ACTL6A-212ENST00000490364 GRIN2AQ12879 1464 aa32.86■■■□□ 2.85
ACTL6A-212ENST00000490364 KIF27Q86VH2 1401 aa32.82■■■□□ 2.84
ACTL6A-212ENST00000490364 CEP170Q5SW79 1584 aa32.71■■■□□ 2.83
ACTL6A-212ENST00000490364 NUP160Q12769 1436 aa32.69■■■□□ 2.82
ACTL6A-212ENST00000490364 IGF1RP08069 1367 aa32.67■■■□□ 2.82
ACTL6A-212ENST00000490364 CUL7Q14999 1698 aa32.66■■■□□ 2.82
ACTL6A-212ENST00000490364 ARAP1Q96P48 1450 aa32.63■■■□□ 2.81
ACTL6A-212ENST00000490364 CYB5RLQ6IPT4 315 aa32.62■■■□□ 2.81
ACTL6A-212ENST00000490364 CARMIL1Q5VZK9 1371 aa32.5■■■□□ 2.79
ACTL6A-212ENST00000490364 SHROOM2Q13796 1616 aa32.49■■■□□ 2.79
ACTL6A-212ENST00000490364 RUSC2Q8N2Y8 1516 aa32.47■■■□□ 2.79
ACTL6A-212ENST00000490364 ERCC6L2Q5T890 1561 aa32.43■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms