RNA–Protein interactions for RNA: ENST00000490356.2

NTM-217, Transcript of neurotrimin, humanhuman

TSL 4

Gene NTM, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NTM-217ENST00000490356 NISCHQ9Y2I1 1504 aa31.63■■■□□ 2.65
NTM-217ENST00000490356 CCDC180Q9P1Z9 1646 aa28.32■■■□□ 2.12
NTM-217ENST00000490356 ABCC9O60706 1549 aa28.19■■■□□ 2.1
NTM-217ENST00000490356 RB1CC1Q8TDY2 1594 aa26.87■■□□□ 1.89
NTM-217ENST00000490356 NACADO15069 1562 aa26.72■■□□□ 1.87
NTM-217ENST00000490356 DCAF8L2P0C7V8 631 aa26.61■■□□□ 1.85
NTM-217ENST00000490356 UNC13AQ9UPW8 1703 aa26.4■■□□□ 1.82
NTM-217ENST00000490356 DNAJC5BQ9UF47 199 aa26.4■■□□□ 1.82
NTM-217ENST00000490356 MYO15BQ96JP2 1530 aa26.39■■□□□ 1.81
NTM-217ENST00000490356 PABPN1Q86U42 306 aaKnown RBP eCLIP26.28■■□□□ 1.8
NTM-217ENST00000490356 ZCCHC6Q5VYS8 1495 aaKnown RBP26.23■■□□□ 1.79
NTM-217ENST00000490356 BICRAQ9NZM4 1560 aa26.16■■□□□ 1.78
NTM-217ENST00000490356 DCAF1Q9Y4B6 1507 aa26.11■■□□□ 1.77
NTM-217ENST00000490356 SCRIBQ14160 1630 aa25.83■■□□□ 1.73
NTM-217ENST00000490356 SHROOM4Q9ULL8 1493 aa25.69■■□□□ 1.7
NTM-217ENST00000490356 CC2D2AQ9P2K1 1620 aa25.5■■□□□ 1.67
NTM-217ENST00000490356 EIF4G1Q04637 1599 aaKnown RBP25.46■■□□□ 1.67
NTM-217ENST00000490356 CECR2Q9BXF3 1484 aa25.36■■□□□ 1.65
NTM-217ENST00000490356 NCAPD3P42695 1498 aa24.67■■□□□ 1.54
NTM-217ENST00000490356 SMARCA4P51532 1647 aa24.64■■□□□ 1.54
NTM-217ENST00000490356 ATAD2BQ9ULI0 1458 aa24.63■■□□□ 1.53
NTM-217ENST00000490356 SMARCA2P51531 1590 aa24.54■■□□□ 1.52
NTM-217ENST00000490356 BAZ1AQ9NRL2 1556 aaPredicted RBP24.51■■□□□ 1.51
NTM-217ENST00000490356 HMGXB3Q12766 1538 aa24.49■■□□□ 1.51
NTM-217ENST00000490356 PEG3Q9GZU2 1588 aa24.4■■□□□ 1.5
NTM-217ENST00000490356 MROH2BQ7Z745 1585 aa24.39■■□□□ 1.5
NTM-217ENST00000490356 BAZ1BQ9UIG0 1483 aaKnown RBP24.37■■□□□ 1.49
NTM-217ENST00000490356 NESP48681 1621 aa24.28■■□□□ 1.48
NTM-217ENST00000490356 ERCC6Q03468 1493 aa24.28■■□□□ 1.48
NTM-217ENST00000490356 CUX2O14529 1486 aa24.19■■□□□ 1.46
NTM-217ENST00000490356 WIZO95785 1651 aa24.14■■□□□ 1.45
NTM-217ENST00000490356 LAMC3Q9Y6N6 1575 aa24.09■■□□□ 1.45
NTM-217ENST00000490356 DNAJC5Q9H3Z4 198 aa24.08■■□□□ 1.45
NTM-217ENST00000490356 KIF21AQ7Z4S6 1674 aa24.01■■□□□ 1.43
NTM-217ENST00000490356 THOC2Q8NI27 1593 aaKnown RBP24■■□□□ 1.43
NTM-217ENST00000490356 CADPSQ9ULU8 1353 aa23.92■■□□□ 1.42
NTM-217ENST00000490356 RSF1Q96T23 1441 aaPredicted RBP23.92■■□□□ 1.42
NTM-217ENST00000490356 PDS5BQ9NTI5 1447 aa23.92■■□□□ 1.42
NTM-217ENST00000490356 TOP2AP11388 1531 aaKnown RBP23.78■■□□□ 1.4
NTM-217ENST00000490356 MRC2Q9UBG0 1479 aa23.72■■□□□ 1.39
NTM-217ENST00000490356 CFTRP13569 1480 aa23.68■■□□□ 1.38
NTM-217ENST00000490356 WDR62O43379 1518 aa23.68■■□□□ 1.38
NTM-217ENST00000490356 FANCD2Q9BXW9 1451 aa23.65■■□□□ 1.38
NTM-217ENST00000490356 CEP164Q9UPV0 1460 aa23.64■■□□□ 1.38
NTM-217ENST00000490356 PRDM2Q13029 1718 aa23.53■■□□□ 1.36
NTM-217ENST00000490356 CCDC88BA6NC98 1476 aa23.53■■□□□ 1.36
NTM-217ENST00000490356 URB2Q14146 1524 aaKnown RBP23.48■■□□□ 1.35
NTM-217ENST00000490356 TOPBP1Q92547 1522 aa23.23■■□□□ 1.31
NTM-217ENST00000490356 ZNF608Q9ULD9 1512 aaPredicted RBP23.18■■□□□ 1.3
NTM-217ENST00000490356 IFT140Q96RY7 1462 aa23.17■■□□□ 1.3
NTM-217ENST00000490356 ABCC8Q09428 1581 aa23.15■■□□□ 1.3
NTM-217ENST00000490356 DNMBPQ6XZF7 1577 aa23.15■■□□□ 1.3
NTM-217ENST00000490356 OSCARQ8IYS5 282 aa23.13■■□□□ 1.29
NTM-217ENST00000490356 TARBP1Q13395 1621 aaKnown RBP23.05■■□□□ 1.28
NTM-217ENST00000490356 TRIM41Q8WV44 630 aa23.05■■□□□ 1.28
NTM-217ENST00000490356 EIF4G3O43432 1585 aaKnown RBP23.04■■□□□ 1.28
NTM-217ENST00000490356 POLA1P09884 1462 aaPredicted RBP23■■□□□ 1.27
NTM-217ENST00000490356 AQRO60306 1485 aaKnown RBP eCLIP22.98■■□□□ 1.27
NTM-217ENST00000490356 SUPT5HO00267 1087 aaKnown RBP22.95■■□□□ 1.26
NTM-217ENST00000490356 RAD54L2Q9Y4B4 1467 aa22.94■■□□□ 1.26
NTM-217ENST00000490356 CUX1P39880 1505 aa22.9■■□□□ 1.26
NTM-217ENST00000490356 CHD1O14646 1710 aa22.89■■□□□ 1.26
NTM-217ENST00000490356 SOGA1O94964 1423 aa22.89■■□□□ 1.25
NTM-217ENST00000490356 FGD5Q6ZNL6 1462 aa22.87■■□□□ 1.25
NTM-217ENST00000490356 RIMBP3CA6NJZ7 1639 aa22.87■■□□□ 1.25
NTM-217ENST00000490356 RIMBP3BA6NNM3 1639 aa22.87■■□□□ 1.25
NTM-217ENST00000490356 RIMBP3Q9UFD9 1639 aa22.87■■□□□ 1.25
NTM-217ENST00000490356 TDRD9Q8NDG6 1382 aaKnown RBP22.84■■□□□ 1.25
NTM-217ENST00000490356 ARHGEF11O15085 1522 aa22.77■■□□□ 1.24
NTM-217ENST00000490356 WDR97A6NE52 1622 aa22.76■■□□□ 1.23
NTM-217ENST00000490356 FBLN2P98095 1184 aa22.75■■□□□ 1.23
NTM-217ENST00000490356 SNAPC4Q5SXM2 1469 aa22.72■■□□□ 1.23
NTM-217ENST00000490356 GRIN2BQ13224 1484 aa22.66■■□□□ 1.22
NTM-217ENST00000490356 PBRM1Q86U86 1689 aa22.65■■□□□ 1.22
NTM-217ENST00000490356 MAGI1Q96QZ7 1491 aaPredicted RBP22.65■■□□□ 1.22
NTM-217ENST00000490356 ABCA10Q8WWZ4 1543 aa22.62■■□□□ 1.21
NTM-217ENST00000490356 GAPVD1Q14C86 1478 aa22.61■■□□□ 1.21
NTM-217ENST00000490356 CYB5RLQ6IPT4 315 aa22.6■■□□□ 1.21
NTM-217ENST00000490356 CHMP7Q8WUX9 453 aaPredicted RBP22.6■■□□□ 1.21
NTM-217ENST00000490356 ABCA5Q8WWZ7 1642 aa22.6■■□□□ 1.21
NTM-217ENST00000490356 CLASP1Q7Z460 1538 aa22.58■■□□□ 1.21
NTM-217ENST00000490356 BIVM-ERCC5R4GMW8 1640 aa22.58■■□□□ 1.21
NTM-217ENST00000490356 SYNJ2O15056 1496 aa22.57■■□□□ 1.2
NTM-217ENST00000490356 ARAP1Q96P48 1450 aa22.57■■□□□ 1.2
NTM-217ENST00000490356 TOP2BQ02880 1626 aa22.56■■□□□ 1.2
NTM-217ENST00000490356 SYNJ1O43426 1573 aa22.55■■□□□ 1.2
NTM-217ENST00000490356 WRNQ14191 1432 aaPredicted RBP eCLIP22.52■■□□□ 1.2
NTM-217ENST00000490356 ADAMTS12P58397 1594 aa22.4■■□□□ 1.18
NTM-217ENST00000490356 GRIN2AQ12879 1464 aa22.38■■□□□ 1.17
NTM-217ENST00000490356 ERICH3Q5RHP9 1530 aa22.33■■□□□ 1.17
NTM-217ENST00000490356 CEP170Q5SW79 1584 aa22.33■■□□□ 1.16
NTM-217ENST00000490356 FHAD1B1AJZ9 1412 aa22.31■■□□□ 1.16
NTM-217ENST00000490356 NUP160Q12769 1436 aa22.31■■□□□ 1.16
NTM-217ENST00000490356 ERCC6L2Q5T890 1561 aa22.29■■□□□ 1.16
NTM-217ENST00000490356 TRHP20396 242 aaPredicted RBP22.27■■□□□ 1.16
NTM-217ENST00000490356 SHROOM2Q13796 1616 aa22.23■■□□□ 1.15
NTM-217ENST00000490356 IGF1RP08069 1367 aa22.11■■□□□ 1.13
NTM-217ENST00000490356 JPH4Q96JJ6 628 aa22.09■■□□□ 1.13
NTM-217ENST00000490356 RUSC2Q8N2Y8 1516 aa22.08■■□□□ 1.13
NTM-217ENST00000490356 KIF27Q86VH2 1401 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms