RNA–Protein interactions for RNA: ENST00000490345.1

GFRA1-205, Transcript of GDNF family receptor alpha 1, humanhuman

TSL 3

Gene GFRA1, Length 355 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1-205ENST00000490345 NISCHQ9Y2I1 1504 aa39.6■■■■□ 3.93
GFRA1-205ENST00000490345 CCDC180Q9P1Z9 1646 aa35.32■■■■□ 3.25
GFRA1-205ENST00000490345 ABCC9O60706 1549 aa34.66■■■■□ 3.14
GFRA1-205ENST00000490345 RB1CC1Q8TDY2 1594 aa33.3■■■□□ 2.92
GFRA1-205ENST00000490345 NACADO15069 1562 aa33.21■■■□□ 2.91
GFRA1-205ENST00000490345 DCAF8L2P0C7V8 631 aa33.11■■■□□ 2.89
GFRA1-205ENST00000490345 ZCCHC6Q5VYS8 1495 aaKnown RBP32.97■■■□□ 2.87
GFRA1-205ENST00000490345 MYO15BQ96JP2 1530 aa32.93■■■□□ 2.86
GFRA1-205ENST00000490345 DCAF1Q9Y4B6 1507 aa32.75■■■□□ 2.83
GFRA1-205ENST00000490345 UNC13AQ9UPW8 1703 aa32.6■■■□□ 2.81
GFRA1-205ENST00000490345 PABPN1Q86U42 306 aaKnown RBP eCLIP32.33■■■□□ 2.77
GFRA1-205ENST00000490345 BICRAQ9NZM4 1560 aa32.28■■■□□ 2.76
GFRA1-205ENST00000490345 SCRIBQ14160 1630 aa32.22■■■□□ 2.75
GFRA1-205ENST00000490345 SHROOM4Q9ULL8 1493 aa31.93■■■□□ 2.7
GFRA1-205ENST00000490345 DNAJC5BQ9UF47 199 aa31.87■■■□□ 2.69
GFRA1-205ENST00000490345 EIF4G1Q04637 1599 aaKnown RBP31.45■■■□□ 2.63
GFRA1-205ENST00000490345 CC2D2AQ9P2K1 1620 aa31.36■■■□□ 2.61
GFRA1-205ENST00000490345 CECR2Q9BXF3 1484 aa31.15■■■□□ 2.58
GFRA1-205ENST00000490345 SMARCA4P51532 1647 aa30.79■■■□□ 2.52
GFRA1-205ENST00000490345 BAZ1AQ9NRL2 1556 aaPredicted RBP30.72■■■□□ 2.51
GFRA1-205ENST00000490345 ATAD2BQ9ULI0 1458 aa30.62■■■□□ 2.49
GFRA1-205ENST00000490345 NCAPD3P42695 1498 aa30.6■■■□□ 2.49
GFRA1-205ENST00000490345 SMARCA2P51531 1590 aa30.6■■■□□ 2.49
GFRA1-205ENST00000490345 MROH2BQ7Z745 1585 aa30.52■■■□□ 2.48
GFRA1-205ENST00000490345 HMGXB3Q12766 1538 aa30.49■■■□□ 2.47
GFRA1-205ENST00000490345 PEG3Q9GZU2 1588 aa30.46■■■□□ 2.47
GFRA1-205ENST00000490345 BAZ1BQ9UIG0 1483 aaKnown RBP30.39■■■□□ 2.46
GFRA1-205ENST00000490345 WIZO95785 1651 aa30.21■■■□□ 2.43
GFRA1-205ENST00000490345 RSF1Q96T23 1441 aaPredicted RBP30.1■■■□□ 2.41
GFRA1-205ENST00000490345 NESP48681 1621 aa29.95■■■□□ 2.38
GFRA1-205ENST00000490345 ERCC6Q03468 1493 aa29.91■■■□□ 2.38
GFRA1-205ENST00000490345 TOP2AP11388 1531 aaKnown RBP29.88■■■□□ 2.37
GFRA1-205ENST00000490345 LAMC3Q9Y6N6 1575 aa29.86■■■□□ 2.37
GFRA1-205ENST00000490345 CADPSQ9ULU8 1353 aa29.71■■■□□ 2.35
GFRA1-205ENST00000490345 KIF21AQ7Z4S6 1674 aa29.65■■■□□ 2.34
GFRA1-205ENST00000490345 PDS5BQ9NTI5 1447 aa29.64■■■□□ 2.34
GFRA1-205ENST00000490345 CUX2O14529 1486 aa29.62■■■□□ 2.33
GFRA1-205ENST00000490345 THOC2Q8NI27 1593 aaKnown RBP29.56■■■□□ 2.32
GFRA1-205ENST00000490345 CFTRP13569 1480 aa29.51■■■□□ 2.31
GFRA1-205ENST00000490345 CCDC88BA6NC98 1476 aa29.48■■■□□ 2.31
GFRA1-205ENST00000490345 FANCD2Q9BXW9 1451 aa29.4■■■□□ 2.3
GFRA1-205ENST00000490345 CEP164Q9UPV0 1460 aa29.39■■■□□ 2.3
GFRA1-205ENST00000490345 PRDM2Q13029 1718 aa29.39■■■□□ 2.3
GFRA1-205ENST00000490345 MRC2Q9UBG0 1479 aa29.37■■■□□ 2.29
GFRA1-205ENST00000490345 WDR62O43379 1518 aa29.29■■■□□ 2.28
GFRA1-205ENST00000490345 SUPT5HO00267 1087 aaKnown RBP29.23■■■□□ 2.27
GFRA1-205ENST00000490345 URB2Q14146 1524 aaKnown RBP29.11■■■□□ 2.25
GFRA1-205ENST00000490345 TOPBP1Q92547 1522 aa28.92■■■□□ 2.22
GFRA1-205ENST00000490345 ABCC8Q09428 1581 aa28.89■■■□□ 2.22
GFRA1-205ENST00000490345 DNMBPQ6XZF7 1577 aa28.89■■■□□ 2.22
GFRA1-205ENST00000490345 DNAJC5Q9H3Z4 198 aa28.82■■■□□ 2.2
GFRA1-205ENST00000490345 IFT140Q96RY7 1462 aa28.77■■■□□ 2.2
GFRA1-205ENST00000490345 POLA1P09884 1462 aaPredicted RBP28.66■■■□□ 2.18
GFRA1-205ENST00000490345 CUX1P39880 1505 aa28.65■■■□□ 2.18
GFRA1-205ENST00000490345 ZNF608Q9ULD9 1512 aaPredicted RBP28.65■■■□□ 2.18
GFRA1-205ENST00000490345 TARBP1Q13395 1621 aaKnown RBP28.62■■■□□ 2.17
GFRA1-205ENST00000490345 FGD5Q6ZNL6 1462 aa28.58■■■□□ 2.17
GFRA1-205ENST00000490345 EIF4G3O43432 1585 aaKnown RBP28.58■■■□□ 2.17
GFRA1-205ENST00000490345 RAD54L2Q9Y4B4 1467 aa28.53■■■□□ 2.16
GFRA1-205ENST00000490345 SOGA1O94964 1423 aa28.52■■■□□ 2.16
GFRA1-205ENST00000490345 AQRO60306 1485 aaKnown RBP eCLIP28.46■■■□□ 2.15
GFRA1-205ENST00000490345 WRNQ14191 1432 aaPredicted RBP eCLIP28.4■■■□□ 2.14
GFRA1-205ENST00000490345 WDR97A6NE52 1622 aa28.4■■■□□ 2.14
GFRA1-205ENST00000490345 BIVM-ERCC5R4GMW8 1640 aa28.39■■■□□ 2.13
GFRA1-205ENST00000490345 TOP2BQ02880 1626 aa28.38■■■□□ 2.13
GFRA1-205ENST00000490345 TDRD9Q8NDG6 1382 aaKnown RBP28.37■■■□□ 2.13
GFRA1-205ENST00000490345 SYNJ1O43426 1573 aa28.37■■■□□ 2.13
GFRA1-205ENST00000490345 OSCARQ8IYS5 282 aa28.32■■■□□ 2.12
GFRA1-205ENST00000490345 ABCA10Q8WWZ4 1543 aa28.28■■■□□ 2.12
GFRA1-205ENST00000490345 CHD1O14646 1710 aa28.26■■■□□ 2.12
GFRA1-205ENST00000490345 PBRM1Q86U86 1689 aa28.23■■■□□ 2.11
GFRA1-205ENST00000490345 GRIN2BQ13224 1484 aa28.22■■■□□ 2.11
GFRA1-205ENST00000490345 SNAPC4Q5SXM2 1469 aa28.22■■■□□ 2.11
GFRA1-205ENST00000490345 ABCA5Q8WWZ7 1642 aa28.21■■■□□ 2.11
GFRA1-205ENST00000490345 GAPVD1Q14C86 1478 aa28.21■■■□□ 2.11
GFRA1-205ENST00000490345 MAGI1Q96QZ7 1491 aaPredicted RBP28.17■■■□□ 2.1
GFRA1-205ENST00000490345 FBLN2P98095 1184 aa28.14■■■□□ 2.1
GFRA1-205ENST00000490345 SYNJ2O15056 1496 aa28.06■■■□□ 2.08
GFRA1-205ENST00000490345 CHMP7Q8WUX9 453 aaPredicted RBP28.03■■■□□ 2.08
GFRA1-205ENST00000490345 ADAMTS12P58397 1594 aa27.97■■■□□ 2.07
GFRA1-205ENST00000490345 RIMBP3CA6NJZ7 1639 aa27.96■■■□□ 2.07
GFRA1-205ENST00000490345 RIMBP3BA6NNM3 1639 aa27.96■■■□□ 2.07
GFRA1-205ENST00000490345 RIMBP3Q9UFD9 1639 aa27.96■■■□□ 2.07
GFRA1-205ENST00000490345 ERICH3Q5RHP9 1530 aa27.95■■■□□ 2.06
GFRA1-205ENST00000490345 ARHGEF11O15085 1522 aa27.92■■■□□ 2.06
GFRA1-205ENST00000490345 CLASP1Q7Z460 1538 aa27.9■■■□□ 2.06
GFRA1-205ENST00000490345 FHAD1B1AJZ9 1412 aa27.87■■■□□ 2.05
GFRA1-205ENST00000490345 TRIM41Q8WV44 630 aa27.87■■■□□ 2.05
GFRA1-205ENST00000490345 GRIN2AQ12879 1464 aa27.86■■■□□ 2.05
GFRA1-205ENST00000490345 KIF27Q86VH2 1401 aa27.82■■■□□ 2.04
GFRA1-205ENST00000490345 CEP170Q5SW79 1584 aa27.74■■■□□ 2.03
GFRA1-205ENST00000490345 NUP160Q12769 1436 aa27.73■■■□□ 2.03
GFRA1-205ENST00000490345 CUL7Q14999 1698 aa27.71■■■□□ 2.03
GFRA1-205ENST00000490345 ARAP1Q96P48 1450 aa27.69■■■□□ 2.02
GFRA1-205ENST00000490345 IGF1RP08069 1367 aa27.68■■■□□ 2.02
GFRA1-205ENST00000490345 CYB5RLQ6IPT4 315 aa27.62■■■□□ 2.01
GFRA1-205ENST00000490345 SHROOM2Q13796 1616 aa27.57■■■□□ 2
GFRA1-205ENST00000490345 RUSC2Q8N2Y8 1516 aa27.56■■■□□ 2
GFRA1-205ENST00000490345 CARMIL1Q5VZK9 1371 aa27.53■■■□□ 2
GFRA1-205ENST00000490345 ERCC6L2Q5T890 1561 aa27.51■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms