RNA–Protein interactions for RNA: ENST00000490305.5

HLA-DOA-205, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 402 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-205ENST00000490305 NISCHQ9Y2I1 1504 aa30.57■■■□□ 2.48
HLA-DOA-205ENST00000490305 CCDC180Q9P1Z9 1646 aa26.87■■□□□ 1.89
HLA-DOA-205ENST00000490305 ZCCHC6Q5VYS8 1495 aaKnown RBP25.63■■□□□ 1.69
HLA-DOA-205ENST00000490305 ABCC9O60706 1549 aa25.47■■□□□ 1.67
HLA-DOA-205ENST00000490305 DCAF1Q9Y4B6 1507 aa25.36■■□□□ 1.65
HLA-DOA-205ENST00000490305 DCAF8L2P0C7V8 631 aa25.23■■□□□ 1.63
HLA-DOA-205ENST00000490305 MYO15BQ96JP2 1530 aa25.17■■□□□ 1.62
HLA-DOA-205ENST00000490305 NACADO15069 1562 aa25.06■■□□□ 1.6
HLA-DOA-205ENST00000490305 RB1CC1Q8TDY2 1594 aa24.9■■□□□ 1.58
HLA-DOA-205ENST00000490305 SHROOM4Q9ULL8 1493 aa24.62■■□□□ 1.53
HLA-DOA-205ENST00000490305 SCRIBQ14160 1630 aa24.54■■□□□ 1.52
HLA-DOA-205ENST00000490305 UNC13AQ9UPW8 1703 aa24.34■■□□□ 1.49
HLA-DOA-205ENST00000490305 BICRAQ9NZM4 1560 aa24.07■■□□□ 1.44
HLA-DOA-205ENST00000490305 PABPN1Q86U42 306 aaKnown RBP eCLIP23.94■■□□□ 1.42
HLA-DOA-205ENST00000490305 CECR2Q9BXF3 1484 aa23.69■■□□□ 1.38
HLA-DOA-205ENST00000490305 BAZ1AQ9NRL2 1556 aaPredicted RBP23.66■■□□□ 1.38
HLA-DOA-205ENST00000490305 SUPT5HO00267 1087 aaKnown RBP23.59■■□□□ 1.37
HLA-DOA-205ENST00000490305 RSF1Q96T23 1441 aaPredicted RBP23.58■■□□□ 1.36
HLA-DOA-205ENST00000490305 MROH2BQ7Z745 1585 aa23.56■■□□□ 1.36
HLA-DOA-205ENST00000490305 SMARCA4P51532 1647 aa23.55■■□□□ 1.36
HLA-DOA-205ENST00000490305 EIF4G1Q04637 1599 aaKnown RBP23.39■■□□□ 1.33
HLA-DOA-205ENST00000490305 WIZO95785 1651 aa23.36■■□□□ 1.33
HLA-DOA-205ENST00000490305 PEG3Q9GZU2 1588 aa23.31■■□□□ 1.32
HLA-DOA-205ENST00000490305 SMARCA2P51531 1590 aa23.26■■□□□ 1.31
HLA-DOA-205ENST00000490305 ATAD2BQ9ULI0 1458 aa23.21■■□□□ 1.31
HLA-DOA-205ENST00000490305 TOP2AP11388 1531 aaKnown RBP23.18■■□□□ 1.3
HLA-DOA-205ENST00000490305 CC2D2AQ9P2K1 1620 aa23.1■■□□□ 1.29
HLA-DOA-205ENST00000490305 NCAPD3P42695 1498 aa23.1■■□□□ 1.29
HLA-DOA-205ENST00000490305 BAZ1BQ9UIG0 1483 aaKnown RBP23.09■■□□□ 1.29
HLA-DOA-205ENST00000490305 HMGXB3Q12766 1538 aa23.06■■□□□ 1.28
HLA-DOA-205ENST00000490305 CCDC88BA6NC98 1476 aa22.88■■□□□ 1.25
HLA-DOA-205ENST00000490305 DNAJC5BQ9UF47 199 aa22.62■■□□□ 1.21
HLA-DOA-205ENST00000490305 CFTRP13569 1480 aa22.49■■□□□ 1.19
HLA-DOA-205ENST00000490305 CHIC1Q5VXU3 224 aa22.49■■□□□ 1.19
HLA-DOA-205ENST00000490305 CADPSQ9ULU8 1353 aa22.47■■□□□ 1.19
HLA-DOA-205ENST00000490305 PRDM2Q13029 1718 aa22.45■■□□□ 1.18
HLA-DOA-205ENST00000490305 LAMC3Q9Y6N6 1575 aa22.38■■□□□ 1.17
HLA-DOA-205ENST00000490305 ABCC8Q09428 1581 aa22.27■■□□□ 1.16
HLA-DOA-205ENST00000490305 TRIM41Q8WV44 630 aa22.27■■□□□ 1.16
HLA-DOA-205ENST00000490305 NESP48681 1621 aa22.27■■□□□ 1.16
HLA-DOA-205ENST00000490305 WRNQ14191 1432 aaPredicted RBP eCLIP22.23■■□□□ 1.15
HLA-DOA-205ENST00000490305 PDS5BQ9NTI5 1447 aa22.21■■□□□ 1.15
HLA-DOA-205ENST00000490305 FANCD2Q9BXW9 1451 aa22.21■■□□□ 1.15
HLA-DOA-205ENST00000490305 SYNJ1O43426 1573 aa22.12■■□□□ 1.13
HLA-DOA-205ENST00000490305 CEP164Q9UPV0 1460 aa22.11■■□□□ 1.13
HLA-DOA-205ENST00000490305 TOP2BQ02880 1626 aa22.1■■□□□ 1.13
HLA-DOA-205ENST00000490305 BIVM-ERCC5R4GMW8 1640 aa22.1■■□□□ 1.13
HLA-DOA-205ENST00000490305 KIF21AQ7Z4S6 1674 aa22.06■■□□□ 1.12
HLA-DOA-205ENST00000490305 CUX1P39880 1505 aa22.06■■□□□ 1.12
HLA-DOA-205ENST00000490305 DNMBPQ6XZF7 1577 aa21.99■■□□□ 1.11
HLA-DOA-205ENST00000490305 TOPBP1Q92547 1522 aa21.94■■□□□ 1.1
HLA-DOA-205ENST00000490305 ERCC6Q03468 1493 aa21.93■■□□□ 1.1
HLA-DOA-205ENST00000490305 URB2Q14146 1524 aaKnown RBP21.91■■□□□ 1.1
HLA-DOA-205ENST00000490305 MRC2Q9UBG0 1479 aa21.91■■□□□ 1.1
HLA-DOA-205ENST00000490305 FGD5Q6ZNL6 1462 aa21.87■■□□□ 1.09
HLA-DOA-205ENST00000490305 EEA1Q15075 1411 aa21.87■■□□□ 1.09
HLA-DOA-205ENST00000490305 WDR62O43379 1518 aa21.8■■□□□ 1.08
HLA-DOA-205ENST00000490305 SOGA1O94964 1423 aa21.8■■□□□ 1.08
HLA-DOA-205ENST00000490305 POLA1P09884 1462 aaPredicted RBP21.79■■□□□ 1.08
HLA-DOA-205ENST00000490305 THOC2Q8NI27 1593 aaKnown RBP21.78■■□□□ 1.08
HLA-DOA-205ENST00000490305 FAM9AQ8IZU1 332 aaPredicted RBP21.77■■□□□ 1.08
HLA-DOA-205ENST00000490305 KIF27Q86VH2 1401 aa21.72■■□□□ 1.07
HLA-DOA-205ENST00000490305 RUSC2Q8N2Y8 1516 aa21.71■■□□□ 1.07
HLA-DOA-205ENST00000490305 ABCA10Q8WWZ4 1543 aa21.7■■□□□ 1.07
HLA-DOA-205ENST00000490305 CSRNP3Q8WYN3 585 aa21.69■■□□□ 1.06
HLA-DOA-205ENST00000490305 RAD54L2Q9Y4B4 1467 aa21.69■■□□□ 1.06
HLA-DOA-205ENST00000490305 CUX2O14529 1486 aa21.68■■□□□ 1.06
HLA-DOA-205ENST00000490305 WDR97A6NE52 1622 aa21.66■■□□□ 1.06
HLA-DOA-205ENST00000490305 TARBP1Q13395 1621 aaKnown RBP21.63■■□□□ 1.05
HLA-DOA-205ENST00000490305 IFT140Q96RY7 1462 aa21.63■■□□□ 1.05
HLA-DOA-205ENST00000490305 KIF21BO75037 1637 aa21.55■■□□□ 1.04
HLA-DOA-205ENST00000490305 LOC105371045A0A1W2PR82 267 aa21.55■■□□□ 1.04
HLA-DOA-205ENST00000490305 ABCA5Q8WWZ7 1642 aa21.55■■□□□ 1.04
HLA-DOA-205ENST00000490305 GAPVD1Q14C86 1478 aa21.51■■□□□ 1.03
HLA-DOA-205ENST00000490305 IGF1RP08069 1367 aa21.5■■□□□ 1.03
HLA-DOA-205ENST00000490305 GOLGA3Q08378 1498 aa21.5■■□□□ 1.03
HLA-DOA-205ENST00000490305 TDRD9Q8NDG6 1382 aaKnown RBP21.49■■□□□ 1.03
HLA-DOA-205ENST00000490305 PRXQ9BXM0 1461 aa21.48■■□□□ 1.03
HLA-DOA-205ENST00000490305 ERICH3Q5RHP9 1530 aa21.47■■□□□ 1.03
HLA-DOA-205ENST00000490305 CUL7Q14999 1698 aa21.45■■□□□ 1.02
HLA-DOA-205ENST00000490305 PBRM1Q86U86 1689 aa21.43■■□□□ 1.02
HLA-DOA-205ENST00000490305 ZNF608Q9ULD9 1512 aaPredicted RBP21.41■■□□□ 1.02
HLA-DOA-205ENST00000490305 CARMIL1Q5VZK9 1371 aa21.41■■□□□ 1.02
HLA-DOA-205ENST00000490305 AQRO60306 1485 aaKnown RBP eCLIP21.4■■□□□ 1.02
HLA-DOA-205ENST00000490305 EHMT2Q96KQ7 1210 aa21.4■■□□□ 1.02
HLA-DOA-205ENST00000490305 EIF4G3O43432 1585 aaKnown RBP21.4■■□□□ 1.02
HLA-DOA-205ENST00000490305 GRIN2BQ13224 1484 aa21.39■■□□□ 1.02
HLA-DOA-205ENST00000490305 RAPGEF2Q9Y4G8 1499 aa21.39■■□□□ 1.02
HLA-DOA-205ENST00000490305 TNIKQ9UKE5 1360 aa21.37■■□□□ 1.01
HLA-DOA-205ENST00000490305 UBTFP17480 764 aaKnown RBP21.37■■□□□ 1.01
HLA-DOA-205ENST00000490305 FHAD1B1AJZ9 1412 aa21.29■■□□□ 1
HLA-DOA-205ENST00000490305 ADAMTS12P58397 1594 aa21.28■■□□□ 1
HLA-DOA-205ENST00000490305 MAGI1Q96QZ7 1491 aaPredicted RBP21.26■□□□□ 0.99
HLA-DOA-205ENST00000490305 SNAPC4Q5SXM2 1469 aa21.25■□□□□ 0.99
HLA-DOA-205ENST00000490305 CEP162Q5TB80 1403 aa21.2■□□□□ 0.98
HLA-DOA-205ENST00000490305 CTTNBP2Q8WZ74 1663 aa21.16■□□□□ 0.98
HLA-DOA-205ENST00000490305 SYNJ2O15056 1496 aa21.16■□□□□ 0.98
HLA-DOA-205ENST00000490305 GRIN2AQ12879 1464 aa21.12■□□□□ 0.97
HLA-DOA-205ENST00000490305 CLIP1P30622 1438 aa21.11■□□□□ 0.97
HLA-DOA-205ENST00000490305 CHMP7Q8WUX9 453 aaPredicted RBP21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms