RNA–Protein interactions for RNA: ENST00000490302.1

PKDCC-208, Transcript of protein kinase domain containing, cytoplasmic, humanhuman

TSL 2

Gene PKDCC, Length 1,447 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKDCC-208ENST00000490302 NISCHQ9Y2I1 1504 aa43.9■■■■■ 4.62
PKDCC-208ENST00000490302 ABCC9O60706 1549 aa39.77■■■■□ 3.96
PKDCC-208ENST00000490302 CCDC180Q9P1Z9 1646 aa39.47■■■■□ 3.91
PKDCC-208ENST00000490302 RB1CC1Q8TDY2 1594 aa37.73■■■■□ 3.63
PKDCC-208ENST00000490302 DNAJC5BQ9UF47 199 aa37.53■■■■□ 3.6
PKDCC-208ENST00000490302 NACADO15069 1562 aa37.41■■■■□ 3.58
PKDCC-208ENST00000490302 DCAF8L2P0C7V8 631 aa37.23■■■■□ 3.55
PKDCC-208ENST00000490302 PABPN1Q86U42 306 aaKnown RBP eCLIP37.01■■■■□ 3.51
PKDCC-208ENST00000490302 MYO15BQ96JP2 1530 aa36.81■■■■□ 3.48
PKDCC-208ENST00000490302 UNC13AQ9UPW8 1703 aa36.79■■■■□ 3.48
PKDCC-208ENST00000490302 BICRAQ9NZM4 1560 aa36.61■■■■□ 3.45
PKDCC-208ENST00000490302 ZCCHC6Q5VYS8 1495 aaKnown RBP36.33■■■■□ 3.41
PKDCC-208ENST00000490302 DCAF1Q9Y4B6 1507 aa36.24■■■■□ 3.39
PKDCC-208ENST00000490302 SHROOM4Q9ULL8 1493 aa36.13■■■■□ 3.37
PKDCC-208ENST00000490302 SCRIBQ14160 1630 aa35.97■■■■□ 3.35
PKDCC-208ENST00000490302 CC2D2AQ9P2K1 1620 aa35.89■■■■□ 3.34
PKDCC-208ENST00000490302 CECR2Q9BXF3 1484 aa35.86■■■■□ 3.33
PKDCC-208ENST00000490302 EIF4G1Q04637 1599 aaKnown RBP35.75■■■■□ 3.31
PKDCC-208ENST00000490302 DNAJC5Q9H3Z4 198 aa34.66■■■■□ 3.14
PKDCC-208ENST00000490302 NCAPD3P42695 1498 aa34.56■■■■□ 3.12
PKDCC-208ENST00000490302 ATAD2BQ9ULI0 1458 aa34.41■■■■□ 3.1
PKDCC-208ENST00000490302 CUX2O14529 1486 aa34.38■■■■□ 3.09
PKDCC-208ENST00000490302 ERCC6Q03468 1493 aa34.37■■■■□ 3.09
PKDCC-208ENST00000490302 SMARCA2P51531 1590 aa34.3■■■■□ 3.08
PKDCC-208ENST00000490302 SMARCA4P51532 1647 aa34.29■■■■□ 3.08
PKDCC-208ENST00000490302 HMGXB3Q12766 1538 aa34.25■■■■□ 3.07
PKDCC-208ENST00000490302 BAZ1AQ9NRL2 1556 aaPredicted RBP34.1■■■■□ 3.05
PKDCC-208ENST00000490302 NESP48681 1621 aa34.08■■■■□ 3.05
PKDCC-208ENST00000490302 BAZ1BQ9UIG0 1483 aaKnown RBP34.07■■■■□ 3.04
PKDCC-208ENST00000490302 PEG3Q9GZU2 1588 aa33.95■■■■□ 3.03
PKDCC-208ENST00000490302 MROH2BQ7Z745 1585 aa33.83■■■■□ 3.01
PKDCC-208ENST00000490302 LAMC3Q9Y6N6 1575 aa33.8■■■■□ 3
PKDCC-208ENST00000490302 THOC2Q8NI27 1593 aaKnown RBP33.76■■■□□ 2.99
PKDCC-208ENST00000490302 PDS5BQ9NTI5 1447 aa33.65■■■□□ 2.98
PKDCC-208ENST00000490302 KIF21AQ7Z4S6 1674 aa33.58■■■□□ 2.97
PKDCC-208ENST00000490302 CADPSQ9ULU8 1353 aa33.51■■■□□ 2.95
PKDCC-208ENST00000490302 WIZO95785 1651 aa33.39■■■□□ 2.94
PKDCC-208ENST00000490302 MRC2Q9UBG0 1479 aa33.36■■■□□ 2.93
PKDCC-208ENST00000490302 WDR62O43379 1518 aa33.27■■■□□ 2.92
PKDCC-208ENST00000490302 CEP164Q9UPV0 1460 aa33.18■■■□□ 2.9
PKDCC-208ENST00000490302 FANCD2Q9BXW9 1451 aa33.12■■■□□ 2.89
PKDCC-208ENST00000490302 TRIM41Q8WV44 630 aa33.06■■■□□ 2.88
PKDCC-208ENST00000490302 CFTRP13569 1480 aa33.06■■■□□ 2.88
PKDCC-208ENST00000490302 RSF1Q96T23 1441 aaPredicted RBP33.05■■■□□ 2.88
PKDCC-208ENST00000490302 TOP2AP11388 1531 aaKnown RBP32.97■■■□□ 2.87
PKDCC-208ENST00000490302 URB2Q14146 1524 aaKnown RBP32.85■■■□□ 2.85
PKDCC-208ENST00000490302 OSCARQ8IYS5 282 aa32.8■■■□□ 2.84
PKDCC-208ENST00000490302 PRDM2Q13029 1718 aa32.62■■■□□ 2.81
PKDCC-208ENST00000490302 CCDC88BA6NC98 1476 aa32.62■■■□□ 2.81
PKDCC-208ENST00000490302 IFT140Q96RY7 1462 aa32.53■■■□□ 2.8
PKDCC-208ENST00000490302 ZNF608Q9ULD9 1512 aaPredicted RBP32.48■■■□□ 2.79
PKDCC-208ENST00000490302 TOPBP1Q92547 1522 aa32.45■■■□□ 2.79
PKDCC-208ENST00000490302 ABCC8Q09428 1581 aa32.38■■■□□ 2.77
PKDCC-208ENST00000490302 RIMBP3CA6NJZ7 1639 aa32.34■■■□□ 2.77
PKDCC-208ENST00000490302 RIMBP3BA6NNM3 1639 aa32.34■■■□□ 2.77
PKDCC-208ENST00000490302 RIMBP3Q9UFD9 1639 aa32.34■■■□□ 2.77
PKDCC-208ENST00000490302 DNMBPQ6XZF7 1577 aa32.3■■■□□ 2.76
PKDCC-208ENST00000490302 EIF4G3O43432 1585 aaKnown RBP32.27■■■□□ 2.76
PKDCC-208ENST00000490302 ARHGEF11O15085 1522 aa32.23■■■□□ 2.75
PKDCC-208ENST00000490302 AQRO60306 1485 aaKnown RBP eCLIP32.17■■■□□ 2.74
PKDCC-208ENST00000490302 TARBP1Q13395 1621 aaKnown RBP32.15■■■□□ 2.74
PKDCC-208ENST00000490302 POLA1P09884 1462 aaPredicted RBP32.1■■■□□ 2.73
PKDCC-208ENST00000490302 CHD1O14646 1710 aa32.05■■■□□ 2.72
PKDCC-208ENST00000490302 FBLN2P98095 1184 aa32.05■■■□□ 2.72
PKDCC-208ENST00000490302 CYB5RLQ6IPT4 315 aa32.05■■■□□ 2.72
PKDCC-208ENST00000490302 RAD54L2Q9Y4B4 1467 aa32■■■□□ 2.71
PKDCC-208ENST00000490302 SOGA1O94964 1423 aa31.98■■■□□ 2.71
PKDCC-208ENST00000490302 TDRD9Q8NDG6 1382 aaKnown RBP31.94■■■□□ 2.7
PKDCC-208ENST00000490302 ARAP1Q96P48 1450 aa31.9■■■□□ 2.7
PKDCC-208ENST00000490302 FGD5Q6ZNL6 1462 aa31.87■■■□□ 2.69
PKDCC-208ENST00000490302 SNAPC4Q5SXM2 1469 aa31.83■■■□□ 2.69
PKDCC-208ENST00000490302 WDR97A6NE52 1622 aa31.83■■■□□ 2.69
PKDCC-208ENST00000490302 TRHP20396 242 aaPredicted RBP31.8■■■□□ 2.68
PKDCC-208ENST00000490302 CUX1P39880 1505 aa31.79■■■□□ 2.68
PKDCC-208ENST00000490302 CHMP7Q8WUX9 453 aaPredicted RBP31.77■■■□□ 2.68
PKDCC-208ENST00000490302 MAGI1Q96QZ7 1491 aaPredicted RBP31.74■■■□□ 2.67
PKDCC-208ENST00000490302 GRIN2BQ13224 1484 aa31.73■■■□□ 2.67
PKDCC-208ENST00000490302 CLASP1Q7Z460 1538 aa31.71■■■□□ 2.67
PKDCC-208ENST00000490302 SYNJ1O43426 1573 aa31.7■■■□□ 2.66
PKDCC-208ENST00000490302 SYNJ2O15056 1496 aa31.64■■■□□ 2.66
PKDCC-208ENST00000490302 GAPVD1Q14C86 1478 aa31.58■■■□□ 2.65
PKDCC-208ENST00000490302 PBRM1Q86U86 1689 aa31.52■■■□□ 2.64
PKDCC-208ENST00000490302 ABCA10Q8WWZ4 1543 aa31.49■■■□□ 2.63
PKDCC-208ENST00000490302 ABCA5Q8WWZ7 1642 aa31.44■■■□□ 2.62
PKDCC-208ENST00000490302 SUPT5HO00267 1087 aaKnown RBP31.44■■■□□ 2.62
PKDCC-208ENST00000490302 WRNQ14191 1432 aaPredicted RBP eCLIP31.33■■■□□ 2.61
PKDCC-208ENST00000490302 GRIN2AQ12879 1464 aa31.3■■■□□ 2.6
PKDCC-208ENST00000490302 ADAMTS12P58397 1594 aa31.23■■■□□ 2.59
PKDCC-208ENST00000490302 NUP160Q12769 1436 aa31.21■■■□□ 2.59
PKDCC-208ENST00000490302 TOP2BQ02880 1626 aa31.21■■■□□ 2.59
PKDCC-208ENST00000490302 ERCC6L2Q5T890 1561 aa31.2■■■□□ 2.59
PKDCC-208ENST00000490302 BIVM-ERCC5R4GMW8 1640 aa31.2■■■□□ 2.58
PKDCC-208ENST00000490302 CEP170Q5SW79 1584 aa31.18■■■□□ 2.58
PKDCC-208ENST00000490302 FHAD1B1AJZ9 1412 aa31.17■■■□□ 2.58
PKDCC-208ENST00000490302 ERICH3Q5RHP9 1530 aa31.09■■■□□ 2.57
PKDCC-208ENST00000490302 AEBP2Q6ZN18 517 aaPredicted RBP31.07■■■□□ 2.56
PKDCC-208ENST00000490302 SHROOM2Q13796 1616 aa31.06■■■□□ 2.56
PKDCC-208ENST00000490302 PRG4Q92954 1404 aaPredicted RBP30.94■■■□□ 2.54
PKDCC-208ENST00000490302 JPH4Q96JJ6 628 aa30.92■■■□□ 2.54
PKDCC-208ENST00000490302 RUSC2Q8N2Y8 1516 aa30.8■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 295.9 ms