RNA–Protein interactions for RNA: ENST00000490156.1

TUFT1-206, Transcript of tuftelin 1, humanhuman

TSL 5

Gene TUFT1, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUFT1-206ENST00000490156 AEBP2Q6ZN18 517 aaPredicted RBP19.32■□□□□ 0.68
TUFT1-206ENST00000490156 NISCHQ9Y2I1 1504 aa18.26■□□□□ 0.51
TUFT1-206ENST00000490156 CHIC1Q5VXU3 224 aa18.11■□□□□ 0.49
TUFT1-206ENST00000490156 SENP3Q9H4L4 574 aaPredicted RBP16.61■□□□□ 0.25
TUFT1-206ENST00000490156 CCDC180Q9P1Z9 1646 aa16.34■□□□□ 0.21
TUFT1-206ENST00000490156 PHF23Q9BUL5 403 aaPredicted RBP16.32■□□□□ 0.2
TUFT1-206ENST00000490156 ABCC9O60706 1549 aa16.18■□□□□ 0.18
TUFT1-206ENST00000490156 DNAJC5BQ9UF47 199 aa15.87■□□□□ 0.13
TUFT1-206ENST00000490156 FOXD1Q16676 465 aa15.53■□□□□ 0.08
TUFT1-206ENST00000490156 RB1CC1Q8TDY2 1594 aa15.44■□□□□ 0.06
TUFT1-206ENST00000490156 NACADO15069 1562 aa15.4■□□□□ 0.06
TUFT1-206ENST00000490156 MYO15BQ96JP2 1530 aa15.32■□□□□ 0.04
TUFT1-206ENST00000490156 POTEDQ86YR6 584 aa15.26■□□□□ 0.03
TUFT1-206ENST00000490156 DCAF8L2P0C7V8 631 aa15.2■□□□□ 0.02
TUFT1-206ENST00000490156 ZCCHC6Q5VYS8 1495 aaKnown RBP15.19■□□□□ 0.02
TUFT1-206ENST00000490156 DCAF1Q9Y4B6 1507 aa15.17■□□□□ 0.02
TUFT1-206ENST00000490156 DNAJC5Q9H3Z4 198 aa15.06■□□□□ 0
TUFT1-206ENST00000490156 PABPN1Q86U42 306 aaKnown RBP eCLIP15□□□□□ -0.01
TUFT1-206ENST00000490156 UNC13AQ9UPW8 1703 aa15□□□□□ -0.01
TUFT1-206ENST00000490156 BICRAQ9NZM4 1560 aa14.94□□□□□ -0.02
TUFT1-206ENST00000490156 SHROOM4Q9ULL8 1493 aa14.9□□□□□ -0.02
TUFT1-206ENST00000490156 SCRIBQ14160 1630 aa14.79□□□□□ -0.04
TUFT1-206ENST00000490156 MSH5O43196 834 aa14.75□□□□□ -0.05
TUFT1-206ENST00000490156 CECR2Q9BXF3 1484 aa14.67□□□□□ -0.06
TUFT1-206ENST00000490156 CC2D2AQ9P2K1 1620 aa14.57□□□□□ -0.08
TUFT1-206ENST00000490156 EIF4G1Q04637 1599 aaKnown RBP14.56□□□□□ -0.08
TUFT1-206ENST00000490156 PIAS4Q8N2W9 510 aaPredicted RBP14.38□□□□□ -0.11
TUFT1-206ENST00000490156 CUX2O14529 1486 aa14.25□□□□□ -0.13
TUFT1-206ENST00000490156 NCAPD3P42695 1498 aa14.2□□□□□ -0.14
TUFT1-206ENST00000490156 SMARCA4P51532 1647 aa14.19□□□□□ -0.14
TUFT1-206ENST00000490156 BAZ1AQ9NRL2 1556 aaPredicted RBP14.18□□□□□ -0.14
TUFT1-206ENST00000490156 SMARCA2P51531 1590 aa14.17□□□□□ -0.14
TUFT1-206ENST00000490156 ATAD2BQ9ULI0 1458 aa14.15□□□□□ -0.14
TUFT1-206ENST00000490156 HMGXB3Q12766 1538 aa14.13□□□□□ -0.15
TUFT1-206ENST00000490156 PPP6R1Q9UPN7 881 aa14.11□□□□□ -0.15
TUFT1-206ENST00000490156 PEG3Q9GZU2 1588 aa14.1□□□□□ -0.15
TUFT1-206ENST00000490156 PLPPR3Q6T4P5 718 aa14.07□□□□□ -0.16
TUFT1-206ENST00000490156 ADRA2BP18089 450 aa14.05□□□□□ -0.16
TUFT1-206ENST00000490156 TRIM41Q8WV44 630 aa14.03□□□□□ -0.16
TUFT1-206ENST00000490156 BAZ1BQ9UIG0 1483 aaKnown RBP14.03□□□□□ -0.16
TUFT1-206ENST00000490156 MROH2BQ7Z745 1585 aa14.03□□□□□ -0.16
TUFT1-206ENST00000490156 ERCC6Q03468 1493 aa13.99□□□□□ -0.17
TUFT1-206ENST00000490156 LAMC3Q9Y6N6 1575 aa13.86□□□□□ -0.19
TUFT1-206ENST00000490156 WIZO95785 1651 aa13.85□□□□□ -0.19
TUFT1-206ENST00000490156 RSF1Q96T23 1441 aaPredicted RBP13.83□□□□□ -0.2
TUFT1-206ENST00000490156 NESP48681 1621 aa13.81□□□□□ -0.2
TUFT1-206ENST00000490156 PDS5BQ9NTI5 1447 aa13.76□□□□□ -0.21
TUFT1-206ENST00000490156 CADPSQ9ULU8 1353 aa13.76□□□□□ -0.21
TUFT1-206ENST00000490156 TOP2AP11388 1531 aaKnown RBP13.75□□□□□ -0.21
TUFT1-206ENST00000490156 THOC2Q8NI27 1593 aaKnown RBP13.69□□□□□ -0.22
TUFT1-206ENST00000490156 CFTRP13569 1480 aa13.66□□□□□ -0.22
TUFT1-206ENST00000490156 KIF21AQ7Z4S6 1674 aa13.66□□□□□ -0.22
TUFT1-206ENST00000490156 MRC2Q9UBG0 1479 aa13.61□□□□□ -0.23
TUFT1-206ENST00000490156 CEP164Q9UPV0 1460 aa13.6□□□□□ -0.23
TUFT1-206ENST00000490156 FANCD2Q9BXW9 1451 aa13.58□□□□□ -0.24
TUFT1-206ENST00000490156 WDR62O43379 1518 aa13.58□□□□□ -0.24
TUFT1-206ENST00000490156 CCDC88BA6NC98 1476 aa13.55□□□□□ -0.24
TUFT1-206ENST00000490156 OSCARQ8IYS5 282 aa13.53□□□□□ -0.24
TUFT1-206ENST00000490156 PRDM2Q13029 1718 aa13.52□□□□□ -0.25
TUFT1-206ENST00000490156 URB2Q14146 1524 aaKnown RBP13.44□□□□□ -0.26
TUFT1-206ENST00000490156 ABCC8Q09428 1581 aa13.41□□□□□ -0.26
TUFT1-206ENST00000490156 TOPBP1Q92547 1522 aa13.35□□□□□ -0.27
TUFT1-206ENST00000490156 DNMBPQ6XZF7 1577 aa13.34□□□□□ -0.27
TUFT1-206ENST00000490156 IFT140Q96RY7 1462 aa13.34□□□□□ -0.27
TUFT1-206ENST00000490156 RIMBP3CA6NJZ7 1639 aa13.33□□□□□ -0.28
TUFT1-206ENST00000490156 RIMBP3BA6NNM3 1639 aa13.33□□□□□ -0.28
TUFT1-206ENST00000490156 RIMBP3Q9UFD9 1639 aa13.33□□□□□ -0.28
TUFT1-206ENST00000490156 SUPT5HO00267 1087 aaKnown RBP13.28□□□□□ -0.28
TUFT1-206ENST00000490156 TRHP20396 242 aaPredicted RBP13.27□□□□□ -0.29
TUFT1-206ENST00000490156 ARHGEF11O15085 1522 aa13.25□□□□□ -0.29
TUFT1-206ENST00000490156 CYB5RLQ6IPT4 315 aa13.24□□□□□ -0.29
TUFT1-206ENST00000490156 POLA1P09884 1462 aaPredicted RBP13.23□□□□□ -0.29
TUFT1-206ENST00000490156 ZNF608Q9ULD9 1512 aaPredicted RBP13.22□□□□□ -0.29
TUFT1-206ENST00000490156 TARBP1Q13395 1621 aaKnown RBP13.21□□□□□ -0.29
TUFT1-206ENST00000490156 WDR97A6NE52 1622 aa13.2□□□□□ -0.3
TUFT1-206ENST00000490156 EIF4G3O43432 1585 aaKnown RBP13.2□□□□□ -0.3
TUFT1-206ENST00000490156 CUX1P39880 1505 aa13.18□□□□□ -0.3
TUFT1-206ENST00000490156 SOGA1O94964 1423 aa13.17□□□□□ -0.3
TUFT1-206ENST00000490156 FGD5Q6ZNL6 1462 aa13.16□□□□□ -0.3
TUFT1-206ENST00000490156 AQRO60306 1485 aaKnown RBP eCLIP13.12□□□□□ -0.31
TUFT1-206ENST00000490156 RAD54L2Q9Y4B4 1467 aa13.12□□□□□ -0.31
TUFT1-206ENST00000490156 ARAP1Q96P48 1450 aa13.09□□□□□ -0.31
TUFT1-206ENST00000490156 TDRD9Q8NDG6 1382 aaKnown RBP13.07□□□□□ -0.32
TUFT1-206ENST00000490156 DMRT2Q9Y5R5 561 aa13.07□□□□□ -0.32
TUFT1-206ENST00000490156 ABCA10Q8WWZ4 1543 aa13.07□□□□□ -0.32
TUFT1-206ENST00000490156 GRIN2BQ13224 1484 aa13.06□□□□□ -0.32
TUFT1-206ENST00000490156 MAPK8IP2Q13387 824 aaPredicted RBP13.06□□□□□ -0.32
TUFT1-206ENST00000490156 TOP2BQ02880 1626 aa13.06□□□□□ -0.32
TUFT1-206ENST00000490156 BIVM-ERCC5R4GMW8 1640 aa13.06□□□□□ -0.32
TUFT1-206ENST00000490156 WRNQ14191 1432 aaPredicted RBP eCLIP13.05□□□□□ -0.32
TUFT1-206ENST00000490156 MAGI1Q96QZ7 1491 aaPredicted RBP13.05□□□□□ -0.32
TUFT1-206ENST00000490156 SNAPC4Q5SXM2 1469 aa13.03□□□□□ -0.32
TUFT1-206ENST00000490156 GAPVD1Q14C86 1478 aa13.02□□□□□ -0.33
TUFT1-206ENST00000490156 CHD1O14646 1710 aa13.02□□□□□ -0.33
TUFT1-206ENST00000490156 ABCA5Q8WWZ7 1642 aa13.01□□□□□ -0.33
TUFT1-206ENST00000490156 SYNJ1O43426 1573 aa12.99□□□□□ -0.33
TUFT1-206ENST00000490156 SYNJ2O15056 1496 aa12.99□□□□□ -0.33
TUFT1-206ENST00000490156 CACNB1Q02641 598 aaPredicted RBP12.98□□□□□ -0.33
TUFT1-206ENST00000490156 PBRM1Q86U86 1689 aa12.98□□□□□ -0.33
TUFT1-206ENST00000490156 FBLN2P98095 1184 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms