RNA–Protein interactions for RNA: ENST00000490132.1

COL9A2-209, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-209ENST00000490132 NISCHQ9Y2I1 1504 aa45.5■■■■■ 4.87
COL9A2-209ENST00000490132 CCDC180Q9P1Z9 1646 aa40.68■■■■■ 4.1
COL9A2-209ENST00000490132 ABCC9O60706 1549 aa40.26■■■■■ 4.03
COL9A2-209ENST00000490132 RB1CC1Q8TDY2 1594 aa38.48■■■■□ 3.75
COL9A2-209ENST00000490132 NACADO15069 1562 aa38.33■■■■□ 3.73
COL9A2-209ENST00000490132 DCAF8L2P0C7V8 631 aa38.13■■■■□ 3.69
COL9A2-209ENST00000490132 MYO15BQ96JP2 1530 aa37.93■■■■□ 3.66
COL9A2-209ENST00000490132 ZCCHC6Q5VYS8 1495 aaKnown RBP37.82■■■■□ 3.64
COL9A2-209ENST00000490132 UNC13AQ9UPW8 1703 aa37.74■■■■□ 3.63
COL9A2-209ENST00000490132 DCAF1Q9Y4B6 1507 aa37.61■■■■□ 3.61
COL9A2-209ENST00000490132 PABPN1Q86U42 306 aaKnown RBP eCLIP37.52■■■■□ 3.6
COL9A2-209ENST00000490132 BICRAQ9NZM4 1560 aa37.42■■■■□ 3.58
COL9A2-209ENST00000490132 DNAJC5BQ9UF47 199 aa37.39■■■■□ 3.58
COL9A2-209ENST00000490132 SCRIBQ14160 1630 aa37.1■■■■□ 3.53
COL9A2-209ENST00000490132 SHROOM4Q9ULL8 1493 aa36.88■■■■□ 3.5
COL9A2-209ENST00000490132 EIF4G1Q04637 1599 aaKnown RBP36.43■■■■□ 3.42
COL9A2-209ENST00000490132 CC2D2AQ9P2K1 1620 aa36.41■■■■□ 3.42
COL9A2-209ENST00000490132 CECR2Q9BXF3 1484 aa36.21■■■■□ 3.39
COL9A2-209ENST00000490132 SMARCA4P51532 1647 aa35.43■■■■□ 3.26
COL9A2-209ENST00000490132 NCAPD3P42695 1498 aa35.36■■■■□ 3.25
COL9A2-209ENST00000490132 ATAD2BQ9ULI0 1458 aa35.34■■■■□ 3.25
COL9A2-209ENST00000490132 BAZ1AQ9NRL2 1556 aaPredicted RBP35.28■■■■□ 3.24
COL9A2-209ENST00000490132 SMARCA2P51531 1590 aa35.25■■■■□ 3.23
COL9A2-209ENST00000490132 HMGXB3Q12766 1538 aa35.17■■■■□ 3.22
COL9A2-209ENST00000490132 MROH2BQ7Z745 1585 aa35.08■■■■□ 3.21
COL9A2-209ENST00000490132 PEG3Q9GZU2 1588 aa35.08■■■■□ 3.21
COL9A2-209ENST00000490132 BAZ1BQ9UIG0 1483 aaKnown RBP35■■■■□ 3.19
COL9A2-209ENST00000490132 NESP48681 1621 aa34.73■■■■□ 3.15
COL9A2-209ENST00000490132 WIZO95785 1651 aa34.71■■■■□ 3.15
COL9A2-209ENST00000490132 ERCC6Q03468 1493 aa34.69■■■■□ 3.14
COL9A2-209ENST00000490132 LAMC3Q9Y6N6 1575 aa34.52■■■■□ 3.12
COL9A2-209ENST00000490132 CUX2O14529 1486 aa34.51■■■■□ 3.11
COL9A2-209ENST00000490132 RSF1Q96T23 1441 aaPredicted RBP34.48■■■■□ 3.11
COL9A2-209ENST00000490132 KIF21AQ7Z4S6 1674 aa34.33■■■■□ 3.09
COL9A2-209ENST00000490132 THOC2Q8NI27 1593 aaKnown RBP34.32■■■■□ 3.09
COL9A2-209ENST00000490132 CADPSQ9ULU8 1353 aa34.3■■■■□ 3.08
COL9A2-209ENST00000490132 TOP2AP11388 1531 aaKnown RBP34.27■■■■□ 3.08
COL9A2-209ENST00000490132 PDS5BQ9NTI5 1447 aa34.26■■■■□ 3.07
COL9A2-209ENST00000490132 CFTRP13569 1480 aa34.01■■■■□ 3.04
COL9A2-209ENST00000490132 DNAJC5Q9H3Z4 198 aa33.99■■■■□ 3.03
COL9A2-209ENST00000490132 MRC2Q9UBG0 1479 aa33.99■■■■□ 3.03
COL9A2-209ENST00000490132 FANCD2Q9BXW9 1451 aa33.93■■■■□ 3.02
COL9A2-209ENST00000490132 CEP164Q9UPV0 1460 aa33.93■■■■□ 3.02
COL9A2-209ENST00000490132 WDR62O43379 1518 aa33.91■■■■□ 3.02
COL9A2-209ENST00000490132 CCDC88BA6NC98 1476 aa33.86■■■■□ 3.01
COL9A2-209ENST00000490132 PRDM2Q13029 1718 aa33.8■■■■□ 3
COL9A2-209ENST00000490132 URB2Q14146 1524 aaKnown RBP33.66■■■□□ 2.98
COL9A2-209ENST00000490132 TOPBP1Q92547 1522 aa33.35■■■□□ 2.93
COL9A2-209ENST00000490132 DNMBPQ6XZF7 1577 aa33.27■■■□□ 2.92
COL9A2-209ENST00000490132 ABCC8Q09428 1581 aa33.25■■■□□ 2.91
COL9A2-209ENST00000490132 IFT140Q96RY7 1462 aa33.23■■■□□ 2.91
COL9A2-209ENST00000490132 SUPT5HO00267 1087 aaKnown RBP33.2■■■□□ 2.91
COL9A2-209ENST00000490132 ZNF608Q9ULD9 1512 aaPredicted RBP33.17■■■□□ 2.9
COL9A2-209ENST00000490132 TARBP1Q13395 1621 aaKnown RBP33.05■■■□□ 2.88
COL9A2-209ENST00000490132 POLA1P09884 1462 aaPredicted RBP33.04■■■□□ 2.88
COL9A2-209ENST00000490132 EIF4G3O43432 1585 aaKnown RBP33.02■■■□□ 2.88
COL9A2-209ENST00000490132 CUX1P39880 1505 aa32.95■■■□□ 2.87
COL9A2-209ENST00000490132 OSCARQ8IYS5 282 aa32.94■■■□□ 2.86
COL9A2-209ENST00000490132 RAD54L2Q9Y4B4 1467 aa32.91■■■□□ 2.86
COL9A2-209ENST00000490132 AQRO60306 1485 aaKnown RBP eCLIP32.89■■■□□ 2.86
COL9A2-209ENST00000490132 FGD5Q6ZNL6 1462 aa32.89■■■□□ 2.86
COL9A2-209ENST00000490132 SOGA1O94964 1423 aa32.85■■■□□ 2.85
COL9A2-209ENST00000490132 TDRD9Q8NDG6 1382 aaKnown RBP32.74■■■□□ 2.83
COL9A2-209ENST00000490132 CHD1O14646 1710 aa32.73■■■□□ 2.83
COL9A2-209ENST00000490132 WDR97A6NE52 1622 aa32.71■■■□□ 2.83
COL9A2-209ENST00000490132 TRIM41Q8WV44 630 aa32.67■■■□□ 2.82
COL9A2-209ENST00000490132 SNAPC4Q5SXM2 1469 aa32.6■■■□□ 2.81
COL9A2-209ENST00000490132 RIMBP3CA6NJZ7 1639 aa32.58■■■□□ 2.81
COL9A2-209ENST00000490132 RIMBP3BA6NNM3 1639 aa32.58■■■□□ 2.81
COL9A2-209ENST00000490132 RIMBP3Q9UFD9 1639 aa32.58■■■□□ 2.81
COL9A2-209ENST00000490132 BIVM-ERCC5R4GMW8 1640 aa32.54■■■□□ 2.8
COL9A2-209ENST00000490132 ABCA10Q8WWZ4 1543 aa32.53■■■□□ 2.8
COL9A2-209ENST00000490132 FBLN2P98095 1184 aa32.53■■■□□ 2.8
COL9A2-209ENST00000490132 GRIN2BQ13224 1484 aa32.53■■■□□ 2.8
COL9A2-209ENST00000490132 TOP2BQ02880 1626 aa32.52■■■□□ 2.8
COL9A2-209ENST00000490132 SYNJ1O43426 1573 aa32.52■■■□□ 2.8
COL9A2-209ENST00000490132 PBRM1Q86U86 1689 aa32.51■■■□□ 2.79
COL9A2-209ENST00000490132 WRNQ14191 1432 aaPredicted RBP eCLIP32.51■■■□□ 2.79
COL9A2-209ENST00000490132 MAGI1Q96QZ7 1491 aaPredicted RBP32.5■■■□□ 2.79
COL9A2-209ENST00000490132 ARHGEF11O15085 1522 aa32.5■■■□□ 2.79
COL9A2-209ENST00000490132 ABCA5Q8WWZ7 1642 aa32.49■■■□□ 2.79
COL9A2-209ENST00000490132 GAPVD1Q14C86 1478 aa32.48■■■□□ 2.79
COL9A2-209ENST00000490132 SYNJ2O15056 1496 aa32.38■■■□□ 2.77
COL9A2-209ENST00000490132 CHMP7Q8WUX9 453 aaPredicted RBP32.35■■■□□ 2.77
COL9A2-209ENST00000490132 CLASP1Q7Z460 1538 aa32.34■■■□□ 2.77
COL9A2-209ENST00000490132 ARAP1Q96P48 1450 aa32.23■■■□□ 2.75
COL9A2-209ENST00000490132 ADAMTS12P58397 1594 aa32.21■■■□□ 2.75
COL9A2-209ENST00000490132 CYB5RLQ6IPT4 315 aa32.16■■■□□ 2.74
COL9A2-209ENST00000490132 GRIN2AQ12879 1464 aa32.13■■■□□ 2.73
COL9A2-209ENST00000490132 ERICH3Q5RHP9 1530 aa32.12■■■□□ 2.73
COL9A2-209ENST00000490132 FHAD1B1AJZ9 1412 aa32.08■■■□□ 2.73
COL9A2-209ENST00000490132 CEP170Q5SW79 1584 aa32.04■■■□□ 2.72
COL9A2-209ENST00000490132 NUP160Q12769 1436 aa32.02■■■□□ 2.72
COL9A2-209ENST00000490132 ERCC6L2Q5T890 1561 aa31.89■■■□□ 2.7
COL9A2-209ENST00000490132 SHROOM2Q13796 1616 aa31.86■■■□□ 2.69
COL9A2-209ENST00000490132 KIF27Q86VH2 1401 aa31.84■■■□□ 2.69
COL9A2-209ENST00000490132 IGF1RP08069 1367 aa31.79■■■□□ 2.68
COL9A2-209ENST00000490132 CUL7Q14999 1698 aa31.76■■■□□ 2.67
COL9A2-209ENST00000490132 RUSC2Q8N2Y8 1516 aa31.75■■■□□ 2.67
COL9A2-209ENST00000490132 TRHP20396 242 aaPredicted RBP31.65■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms