RNA–Protein interactions for RNA: ENST00000490117.5

CPA4-208, Transcript of carboxypeptidase A4, humanhuman

TSL 2

Gene CPA4, Length 568 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPA4-208ENST00000490117 NISCHQ9Y2I1 1504 aa17.56■□□□□ 0.4
CPA4-208ENST00000490117 CCDC180Q9P1Z9 1646 aa15.54■□□□□ 0.08
CPA4-208ENST00000490117 AEBP2Q6ZN18 517 aaPredicted RBP15.47■□□□□ 0.07
CPA4-208ENST00000490117 ABCC9O60706 1549 aa14.89□□□□□ -0.03
CPA4-208ENST00000490117 ZCCHC6Q5VYS8 1495 aaKnown RBP14.71□□□□□ -0.05
CPA4-208ENST00000490117 CHIC1Q5VXU3 224 aa14.65□□□□□ -0.06
CPA4-208ENST00000490117 DCAF8L2P0C7V8 631 aa14.55□□□□□ -0.08
CPA4-208ENST00000490117 DCAF1Q9Y4B6 1507 aa14.47□□□□□ -0.09
CPA4-208ENST00000490117 NACADO15069 1562 aa14.43□□□□□ -0.1
CPA4-208ENST00000490117 RB1CC1Q8TDY2 1594 aa14.41□□□□□ -0.1
CPA4-208ENST00000490117 MYO15BQ96JP2 1530 aa14.37□□□□□ -0.11
CPA4-208ENST00000490117 UNC13AQ9UPW8 1703 aa14.3□□□□□ -0.12
CPA4-208ENST00000490117 SCRIBQ14160 1630 aa14.27□□□□□ -0.12
CPA4-208ENST00000490117 SHROOM4Q9ULL8 1493 aa14.18□□□□□ -0.14
CPA4-208ENST00000490117 BICRAQ9NZM4 1560 aa14.02□□□□□ -0.16
CPA4-208ENST00000490117 PABPN1Q86U42 306 aaKnown RBP eCLIP13.92□□□□□ -0.18
CPA4-208ENST00000490117 CECR2Q9BXF3 1484 aa13.69□□□□□ -0.22
CPA4-208ENST00000490117 SMARCA4P51532 1647 aa13.62□□□□□ -0.23
CPA4-208ENST00000490117 EIF4G1Q04637 1599 aaKnown RBP13.6□□□□□ -0.23
CPA4-208ENST00000490117 MROH2BQ7Z745 1585 aa13.59□□□□□ -0.23
CPA4-208ENST00000490117 BAZ1AQ9NRL2 1556 aaPredicted RBP13.58□□□□□ -0.23
CPA4-208ENST00000490117 WIZO95785 1651 aa13.54□□□□□ -0.24
CPA4-208ENST00000490117 CC2D2AQ9P2K1 1620 aa13.49□□□□□ -0.25
CPA4-208ENST00000490117 RSF1Q96T23 1441 aaPredicted RBP13.48□□□□□ -0.25
CPA4-208ENST00000490117 SUPT5HO00267 1087 aaKnown RBP13.44□□□□□ -0.26
CPA4-208ENST00000490117 PEG3Q9GZU2 1588 aa13.4□□□□□ -0.26
CPA4-208ENST00000490117 SMARCA2P51531 1590 aa13.38□□□□□ -0.27
CPA4-208ENST00000490117 ATAD2BQ9ULI0 1458 aa13.38□□□□□ -0.27
CPA4-208ENST00000490117 TOP2AP11388 1531 aaKnown RBP13.33□□□□□ -0.28
CPA4-208ENST00000490117 BAZ1BQ9UIG0 1483 aaKnown RBP13.32□□□□□ -0.28
CPA4-208ENST00000490117 SENP3Q9H4L4 574 aaPredicted RBP13.32□□□□□ -0.28
CPA4-208ENST00000490117 HMGXB3Q12766 1538 aa13.3□□□□□ -0.28
CPA4-208ENST00000490117 DNAJC5BQ9UF47 199 aa13.3□□□□□ -0.28
CPA4-208ENST00000490117 NCAPD3P42695 1498 aa13.27□□□□□ -0.29
CPA4-208ENST00000490117 CCDC88BA6NC98 1476 aa13.14□□□□□ -0.31
CPA4-208ENST00000490117 PHF23Q9BUL5 403 aaPredicted RBP13.09□□□□□ -0.31
CPA4-208ENST00000490117 PRDM2Q13029 1718 aa13.07□□□□□ -0.32
CPA4-208ENST00000490117 NESP48681 1621 aa13□□□□□ -0.33
CPA4-208ENST00000490117 KIF21AQ7Z4S6 1674 aa12.95□□□□□ -0.34
CPA4-208ENST00000490117 LAMC3Q9Y6N6 1575 aa12.94□□□□□ -0.34
CPA4-208ENST00000490117 CFTRP13569 1480 aa12.91□□□□□ -0.34
CPA4-208ENST00000490117 CADPSQ9ULU8 1353 aa12.9□□□□□ -0.34
CPA4-208ENST00000490117 ABCC8Q09428 1581 aa12.87□□□□□ -0.35
CPA4-208ENST00000490117 FANCD2Q9BXW9 1451 aa12.82□□□□□ -0.36
CPA4-208ENST00000490117 CEP164Q9UPV0 1460 aa12.78□□□□□ -0.36
CPA4-208ENST00000490117 SYNJ1O43426 1573 aa12.77□□□□□ -0.36
CPA4-208ENST00000490117 PDS5BQ9NTI5 1447 aa12.77□□□□□ -0.37
CPA4-208ENST00000490117 ERCC6Q03468 1493 aa12.76□□□□□ -0.37
CPA4-208ENST00000490117 BIVM-ERCC5R4GMW8 1640 aa12.74□□□□□ -0.37
CPA4-208ENST00000490117 THOC2Q8NI27 1593 aaKnown RBP12.74□□□□□ -0.37
CPA4-208ENST00000490117 CUX1P39880 1505 aa12.73□□□□□ -0.37
CPA4-208ENST00000490117 URB2Q14146 1524 aaKnown RBP12.72□□□□□ -0.37
CPA4-208ENST00000490117 DNMBPQ6XZF7 1577 aa12.71□□□□□ -0.37
CPA4-208ENST00000490117 WRNQ14191 1432 aaPredicted RBP eCLIP12.71□□□□□ -0.38
CPA4-208ENST00000490117 TOP2BQ02880 1626 aa12.7□□□□□ -0.38
CPA4-208ENST00000490117 MRC2Q9UBG0 1479 aa12.69□□□□□ -0.38
CPA4-208ENST00000490117 TOPBP1Q92547 1522 aa12.67□□□□□ -0.38
CPA4-208ENST00000490117 WDR62O43379 1518 aa12.65□□□□□ -0.38
CPA4-208ENST00000490117 FGD5Q6ZNL6 1462 aa12.63□□□□□ -0.39
CPA4-208ENST00000490117 WDR97A6NE52 1622 aa12.6□□□□□ -0.39
CPA4-208ENST00000490117 TRIM41Q8WV44 630 aa12.6□□□□□ -0.39
CPA4-208ENST00000490117 POLA1P09884 1462 aaPredicted RBP12.59□□□□□ -0.39
CPA4-208ENST00000490117 RAD54L2Q9Y4B4 1467 aa12.56□□□□□ -0.4
CPA4-208ENST00000490117 TARBP1Q13395 1621 aaKnown RBP12.55□□□□□ -0.4
CPA4-208ENST00000490117 CUX2O14529 1486 aa12.53□□□□□ -0.4
CPA4-208ENST00000490117 RUSC2Q8N2Y8 1516 aa12.5□□□□□ -0.41
CPA4-208ENST00000490117 PBRM1Q86U86 1689 aa12.5□□□□□ -0.41
CPA4-208ENST00000490117 SOGA1O94964 1423 aa12.49□□□□□ -0.41
CPA4-208ENST00000490117 ABCA5Q8WWZ7 1642 aa12.48□□□□□ -0.41
CPA4-208ENST00000490117 EIF4G3O43432 1585 aaKnown RBP12.47□□□□□ -0.41
CPA4-208ENST00000490117 ABCA10Q8WWZ4 1543 aa12.47□□□□□ -0.41
CPA4-208ENST00000490117 IFT140Q96RY7 1462 aa12.46□□□□□ -0.41
CPA4-208ENST00000490117 ZNF608Q9ULD9 1512 aaPredicted RBP12.46□□□□□ -0.42
CPA4-208ENST00000490117 FAM9AQ8IZU1 332 aaPredicted RBP12.45□□□□□ -0.42
CPA4-208ENST00000490117 TDRD9Q8NDG6 1382 aaKnown RBP12.41□□□□□ -0.42
CPA4-208ENST00000490117 AQRO60306 1485 aaKnown RBP eCLIP12.4□□□□□ -0.43
CPA4-208ENST00000490117 KIF27Q86VH2 1401 aa12.39□□□□□ -0.43
CPA4-208ENST00000490117 GAPVD1Q14C86 1478 aa12.38□□□□□ -0.43
CPA4-208ENST00000490117 FOXD1Q16676 465 aa12.35□□□□□ -0.43
CPA4-208ENST00000490117 CUL7Q14999 1698 aa12.35□□□□□ -0.43
CPA4-208ENST00000490117 EHMT2Q96KQ7 1210 aa12.34□□□□□ -0.43
CPA4-208ENST00000490117 EEA1Q15075 1411 aa12.34□□□□□ -0.43
CPA4-208ENST00000490117 ADAMTS12P58397 1594 aa12.34□□□□□ -0.43
CPA4-208ENST00000490117 CHD1O14646 1710 aa12.34□□□□□ -0.43
CPA4-208ENST00000490117 SNAPC4Q5SXM2 1469 aa12.32□□□□□ -0.44
CPA4-208ENST00000490117 ERICH3Q5RHP9 1530 aa12.32□□□□□ -0.44
CPA4-208ENST00000490117 KIF21BO75037 1637 aa12.31□□□□□ -0.44
CPA4-208ENST00000490117 GRIN2BQ13224 1484 aa12.31□□□□□ -0.44
CPA4-208ENST00000490117 CSRNP3Q8WYN3 585 aa12.28□□□□□ -0.44
CPA4-208ENST00000490117 IGF1RP08069 1367 aa12.27□□□□□ -0.45
CPA4-208ENST00000490117 CTTNBP2Q8WZ74 1663 aa12.26□□□□□ -0.45
CPA4-208ENST00000490117 RAPGEF2Q9Y4G8 1499 aa12.26□□□□□ -0.45
CPA4-208ENST00000490117 PRXQ9BXM0 1461 aa12.25□□□□□ -0.45
CPA4-208ENST00000490117 MAGI1Q96QZ7 1491 aaPredicted RBP12.24□□□□□ -0.45
CPA4-208ENST00000490117 CARMIL1Q5VZK9 1371 aa12.23□□□□□ -0.45
CPA4-208ENST00000490117 GOLGA3Q08378 1498 aa12.22□□□□□ -0.45
CPA4-208ENST00000490117 LOC105371045A0A1W2PR82 267 aa12.22□□□□□ -0.45
CPA4-208ENST00000490117 FHAD1B1AJZ9 1412 aa12.21□□□□□ -0.45
CPA4-208ENST00000490117 SYNJ2O15056 1496 aa12.2□□□□□ -0.46
CPA4-208ENST00000490117 GRIN2AQ12879 1464 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms