RNA–Protein interactions for RNA: ENST00000490055.5

LRRC27-213, Transcript of leucine rich repeat containing 27, humanhuman

TSL 3

Gene LRRC27, Length 736 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC27-213ENST00000490055 NISCHQ9Y2I1 1504 aa45.7■■■■■ 4.91
LRRC27-213ENST00000490055 CCDC180Q9P1Z9 1646 aa40.8■■■■■ 4.12
LRRC27-213ENST00000490055 ABCC9O60706 1549 aa40.39■■■■■ 4.06
LRRC27-213ENST00000490055 RB1CC1Q8TDY2 1594 aa38.61■■■■□ 3.77
LRRC27-213ENST00000490055 NACADO15069 1562 aa38.46■■■■□ 3.75
LRRC27-213ENST00000490055 DCAF8L2P0C7V8 631 aa38.31■■■■□ 3.72
LRRC27-213ENST00000490055 MYO15BQ96JP2 1530 aa38.08■■■■□ 3.69
LRRC27-213ENST00000490055 ZCCHC6Q5VYS8 1495 aaKnown RBP37.98■■■■□ 3.67
LRRC27-213ENST00000490055 UNC13AQ9UPW8 1703 aa37.8■■■■□ 3.64
LRRC27-213ENST00000490055 DCAF1Q9Y4B6 1507 aa37.77■■■■□ 3.64
LRRC27-213ENST00000490055 PABPN1Q86U42 306 aaKnown RBP eCLIP37.67■■■■□ 3.62
LRRC27-213ENST00000490055 BICRAQ9NZM4 1560 aa37.54■■■■□ 3.6
LRRC27-213ENST00000490055 DNAJC5BQ9UF47 199 aa37.53■■■■□ 3.6
LRRC27-213ENST00000490055 SCRIBQ14160 1630 aa37.24■■■■□ 3.55
LRRC27-213ENST00000490055 SHROOM4Q9ULL8 1493 aa37.01■■■■□ 3.51
LRRC27-213ENST00000490055 EIF4G1Q04637 1599 aaKnown RBP36.55■■■■□ 3.44
LRRC27-213ENST00000490055 CC2D2AQ9P2K1 1620 aa36.52■■■■□ 3.44
LRRC27-213ENST00000490055 CECR2Q9BXF3 1484 aa36.32■■■■□ 3.41
LRRC27-213ENST00000490055 SMARCA4P51532 1647 aa35.56■■■■□ 3.28
LRRC27-213ENST00000490055 NCAPD3P42695 1498 aa35.51■■■■□ 3.28
LRRC27-213ENST00000490055 ATAD2BQ9ULI0 1458 aa35.48■■■■□ 3.27
LRRC27-213ENST00000490055 BAZ1AQ9NRL2 1556 aaPredicted RBP35.42■■■■□ 3.26
LRRC27-213ENST00000490055 SMARCA2P51531 1590 aa35.38■■■■□ 3.25
LRRC27-213ENST00000490055 HMGXB3Q12766 1538 aa35.3■■■■□ 3.24
LRRC27-213ENST00000490055 MROH2BQ7Z745 1585 aa35.24■■■■□ 3.23
LRRC27-213ENST00000490055 PEG3Q9GZU2 1588 aa35.21■■■■□ 3.23
LRRC27-213ENST00000490055 BAZ1BQ9UIG0 1483 aaKnown RBP35.14■■■■□ 3.22
LRRC27-213ENST00000490055 NESP48681 1621 aa34.85■■■■□ 3.17
LRRC27-213ENST00000490055 WIZO95785 1651 aa34.83■■■■□ 3.17
LRRC27-213ENST00000490055 ERCC6Q03468 1493 aa34.81■■■■□ 3.16
LRRC27-213ENST00000490055 RSF1Q96T23 1441 aaPredicted RBP34.65■■■■□ 3.14
LRRC27-213ENST00000490055 LAMC3Q9Y6N6 1575 aa34.63■■■■□ 3.13
LRRC27-213ENST00000490055 CUX2O14529 1486 aa34.61■■■■□ 3.13
LRRC27-213ENST00000490055 CADPSQ9ULU8 1353 aa34.44■■■■□ 3.1
LRRC27-213ENST00000490055 KIF21AQ7Z4S6 1674 aa34.41■■■■□ 3.1
LRRC27-213ENST00000490055 THOC2Q8NI27 1593 aaKnown RBP34.41■■■■□ 3.1
LRRC27-213ENST00000490055 TOP2AP11388 1531 aaKnown RBP34.41■■■■□ 3.1
LRRC27-213ENST00000490055 PDS5BQ9NTI5 1447 aa34.39■■■■□ 3.1
LRRC27-213ENST00000490055 CFTRP13569 1480 aa34.16■■■■□ 3.06
LRRC27-213ENST00000490055 MRC2Q9UBG0 1479 aa34.1■■■■□ 3.05
LRRC27-213ENST00000490055 DNAJC5Q9H3Z4 198 aa34.08■■■■□ 3.05
LRRC27-213ENST00000490055 FANCD2Q9BXW9 1451 aa34.06■■■■□ 3.04
LRRC27-213ENST00000490055 CEP164Q9UPV0 1460 aa34.05■■■■□ 3.04
LRRC27-213ENST00000490055 WDR62O43379 1518 aa34.03■■■■□ 3.04
LRRC27-213ENST00000490055 CCDC88BA6NC98 1476 aa34.01■■■■□ 3.04
LRRC27-213ENST00000490055 PRDM2Q13029 1718 aa33.85■■■■□ 3.01
LRRC27-213ENST00000490055 URB2Q14146 1524 aaKnown RBP33.79■■■■□ 3
LRRC27-213ENST00000490055 TOPBP1Q92547 1522 aa33.48■■■□□ 2.95
LRRC27-213ENST00000490055 SUPT5HO00267 1087 aaKnown RBP33.4■■■□□ 2.94
LRRC27-213ENST00000490055 DNMBPQ6XZF7 1577 aa33.39■■■□□ 2.94
LRRC27-213ENST00000490055 ABCC8Q09428 1581 aa33.38■■■□□ 2.93
LRRC27-213ENST00000490055 IFT140Q96RY7 1462 aa33.36■■■□□ 2.93
LRRC27-213ENST00000490055 ZNF608Q9ULD9 1512 aaPredicted RBP33.29■■■□□ 2.92
LRRC27-213ENST00000490055 POLA1P09884 1462 aaPredicted RBP33.17■■■□□ 2.9
LRRC27-213ENST00000490055 TARBP1Q13395 1621 aaKnown RBP33.17■■■□□ 2.9
LRRC27-213ENST00000490055 EIF4G3O43432 1585 aaKnown RBP33.13■■■□□ 2.89
LRRC27-213ENST00000490055 CUX1P39880 1505 aa33.08■■■□□ 2.89
LRRC27-213ENST00000490055 OSCARQ8IYS5 282 aa33.07■■■□□ 2.88
LRRC27-213ENST00000490055 RAD54L2Q9Y4B4 1467 aa33.05■■■□□ 2.88
LRRC27-213ENST00000490055 AQRO60306 1485 aaKnown RBP eCLIP33.03■■■□□ 2.88
LRRC27-213ENST00000490055 FGD5Q6ZNL6 1462 aa33.02■■■□□ 2.88
LRRC27-213ENST00000490055 SOGA1O94964 1423 aa32.99■■■□□ 2.87
LRRC27-213ENST00000490055 TDRD9Q8NDG6 1382 aaKnown RBP32.89■■■□□ 2.86
LRRC27-213ENST00000490055 WDR97A6NE52 1622 aa32.82■■■□□ 2.84
LRRC27-213ENST00000490055 CHD1O14646 1710 aa32.8■■■□□ 2.84
LRRC27-213ENST00000490055 TRIM41Q8WV44 630 aa32.76■■■□□ 2.83
LRRC27-213ENST00000490055 SNAPC4Q5SXM2 1469 aa32.71■■■□□ 2.83
LRRC27-213ENST00000490055 ABCA10Q8WWZ4 1543 aa32.67■■■□□ 2.82
LRRC27-213ENST00000490055 GRIN2BQ13224 1484 aa32.67■■■□□ 2.82
LRRC27-213ENST00000490055 BIVM-ERCC5R4GMW8 1640 aa32.66■■■□□ 2.82
LRRC27-213ENST00000490055 FBLN2P98095 1184 aa32.66■■■□□ 2.82
LRRC27-213ENST00000490055 WRNQ14191 1432 aaPredicted RBP eCLIP32.66■■■□□ 2.82
LRRC27-213ENST00000490055 RIMBP3CA6NJZ7 1639 aa32.66■■■□□ 2.82
LRRC27-213ENST00000490055 RIMBP3BA6NNM3 1639 aa32.66■■■□□ 2.82
LRRC27-213ENST00000490055 TOP2BQ02880 1626 aa32.66■■■□□ 2.82
LRRC27-213ENST00000490055 RIMBP3Q9UFD9 1639 aa32.66■■■□□ 2.82
LRRC27-213ENST00000490055 SYNJ1O43426 1573 aa32.65■■■□□ 2.82
LRRC27-213ENST00000490055 GAPVD1Q14C86 1478 aa32.61■■■□□ 2.81
LRRC27-213ENST00000490055 MAGI1Q96QZ7 1491 aaPredicted RBP32.61■■■□□ 2.81
LRRC27-213ENST00000490055 PBRM1Q86U86 1689 aa32.59■■■□□ 2.81
LRRC27-213ENST00000490055 ABCA5Q8WWZ7 1642 aa32.59■■■□□ 2.81
LRRC27-213ENST00000490055 ARHGEF11O15085 1522 aa32.59■■■□□ 2.81
LRRC27-213ENST00000490055 SYNJ2O15056 1496 aa32.51■■■□□ 2.79
LRRC27-213ENST00000490055 CHMP7Q8WUX9 453 aaPredicted RBP32.5■■■□□ 2.79
LRRC27-213ENST00000490055 CLASP1Q7Z460 1538 aa32.44■■■□□ 2.78
LRRC27-213ENST00000490055 ARAP1Q96P48 1450 aa32.32■■■□□ 2.76
LRRC27-213ENST00000490055 ADAMTS12P58397 1594 aa32.32■■■□□ 2.76
LRRC27-213ENST00000490055 CYB5RLQ6IPT4 315 aa32.28■■■□□ 2.76
LRRC27-213ENST00000490055 GRIN2AQ12879 1464 aa32.26■■■□□ 2.75
LRRC27-213ENST00000490055 ERICH3Q5RHP9 1530 aa32.26■■■□□ 2.75
LRRC27-213ENST00000490055 FHAD1B1AJZ9 1412 aa32.21■■■□□ 2.75
LRRC27-213ENST00000490055 CEP170Q5SW79 1584 aa32.15■■■□□ 2.74
LRRC27-213ENST00000490055 NUP160Q12769 1436 aa32.15■■■□□ 2.74
LRRC27-213ENST00000490055 ERCC6L2Q5T890 1561 aa31.99■■■□□ 2.71
LRRC27-213ENST00000490055 KIF27Q86VH2 1401 aa31.99■■■□□ 2.71
LRRC27-213ENST00000490055 SHROOM2Q13796 1616 aa31.96■■■□□ 2.71
LRRC27-213ENST00000490055 IGF1RP08069 1367 aa31.95■■■□□ 2.71
LRRC27-213ENST00000490055 CUL7Q14999 1698 aa31.86■■■□□ 2.69
LRRC27-213ENST00000490055 RUSC2Q8N2Y8 1516 aa31.85■■■□□ 2.69
LRRC27-213ENST00000490055 PRG4Q92954 1404 aaPredicted RBP31.77■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms