RNA–Protein interactions for RNA: ENST00000490031.1

SVIL-211, Transcript of supervillin, humanhuman

TSL 3

Gene SVIL, Length 190 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIL-211ENST00000490031 NISCHQ9Y2I1 1504 aa35.01■■■■□ 3.19
SVIL-211ENST00000490031 CCDC180Q9P1Z9 1646 aa31.13■■■□□ 2.57
SVIL-211ENST00000490031 ABCC9O60706 1549 aa30.69■■■□□ 2.5
SVIL-211ENST00000490031 DCAF8L2P0C7V8 631 aa29.41■■■□□ 2.3
SVIL-211ENST00000490031 RB1CC1Q8TDY2 1594 aa29.41■■■□□ 2.3
SVIL-211ENST00000490031 NACADO15069 1562 aa29.34■■■□□ 2.29
SVIL-211ENST00000490031 ZCCHC6Q5VYS8 1495 aaKnown RBP29.12■■■□□ 2.25
SVIL-211ENST00000490031 MYO15BQ96JP2 1530 aa29.09■■■□□ 2.25
SVIL-211ENST00000490031 DCAF1Q9Y4B6 1507 aa28.92■■■□□ 2.22
SVIL-211ENST00000490031 UNC13AQ9UPW8 1703 aa28.71■■■□□ 2.19
SVIL-211ENST00000490031 PABPN1Q86U42 306 aaKnown RBP eCLIP28.69■■■□□ 2.18
SVIL-211ENST00000490031 BICRAQ9NZM4 1560 aa28.52■■■□□ 2.16
SVIL-211ENST00000490031 SCRIBQ14160 1630 aa28.47■■■□□ 2.15
SVIL-211ENST00000490031 DNAJC5BQ9UF47 199 aa28.3■■■□□ 2.12
SVIL-211ENST00000490031 SHROOM4Q9ULL8 1493 aa28.18■■■□□ 2.1
SVIL-211ENST00000490031 EIF4G1Q04637 1599 aaKnown RBP27.79■■■□□ 2.04
SVIL-211ENST00000490031 CC2D2AQ9P2K1 1620 aa27.71■■■□□ 2.03
SVIL-211ENST00000490031 CECR2Q9BXF3 1484 aa27.57■■■□□ 2
SVIL-211ENST00000490031 SMARCA4P51532 1647 aa27.19■■□□□ 1.94
SVIL-211ENST00000490031 BAZ1AQ9NRL2 1556 aaPredicted RBP27.14■■□□□ 1.93
SVIL-211ENST00000490031 ATAD2BQ9ULI0 1458 aa27.09■■□□□ 1.93
SVIL-211ENST00000490031 NCAPD3P42695 1498 aa27.08■■□□□ 1.93
SVIL-211ENST00000490031 SMARCA2P51531 1590 aa27.04■■□□□ 1.92
SVIL-211ENST00000490031 MROH2BQ7Z745 1585 aa26.99■■□□□ 1.91
SVIL-211ENST00000490031 HMGXB3Q12766 1538 aa26.92■■□□□ 1.9
SVIL-211ENST00000490031 PEG3Q9GZU2 1588 aa26.89■■□□□ 1.9
SVIL-211ENST00000490031 BAZ1BQ9UIG0 1483 aaKnown RBP26.87■■□□□ 1.89
SVIL-211ENST00000490031 WIZO95785 1651 aa26.68■■□□□ 1.86
SVIL-211ENST00000490031 RSF1Q96T23 1441 aaPredicted RBP26.64■■□□□ 1.85
SVIL-211ENST00000490031 NESP48681 1621 aa26.5■■□□□ 1.83
SVIL-211ENST00000490031 ERCC6Q03468 1493 aa26.47■■□□□ 1.83
SVIL-211ENST00000490031 TOP2AP11388 1531 aaKnown RBP26.39■■□□□ 1.81
SVIL-211ENST00000490031 LAMC3Q9Y6N6 1575 aa26.38■■□□□ 1.81
SVIL-211ENST00000490031 CADPSQ9ULU8 1353 aa26.31■■□□□ 1.8
SVIL-211ENST00000490031 PDS5BQ9NTI5 1447 aa26.23■■□□□ 1.79
SVIL-211ENST00000490031 CUX2O14529 1486 aa26.19■■□□□ 1.78
SVIL-211ENST00000490031 KIF21AQ7Z4S6 1674 aa26.15■■□□□ 1.78
SVIL-211ENST00000490031 CFTRP13569 1480 aa26.11■■□□□ 1.77
SVIL-211ENST00000490031 CCDC88BA6NC98 1476 aa26.1■■□□□ 1.77
SVIL-211ENST00000490031 THOC2Q8NI27 1593 aaKnown RBP26.09■■□□□ 1.77
SVIL-211ENST00000490031 FANCD2Q9BXW9 1451 aa26.01■■□□□ 1.75
SVIL-211ENST00000490031 CEP164Q9UPV0 1460 aa25.98■■□□□ 1.75
SVIL-211ENST00000490031 MRC2Q9UBG0 1479 aa25.98■■□□□ 1.75
SVIL-211ENST00000490031 SUPT5HO00267 1087 aaKnown RBP25.93■■□□□ 1.74
SVIL-211ENST00000490031 WDR62O43379 1518 aa25.88■■□□□ 1.73
SVIL-211ENST00000490031 PRDM2Q13029 1718 aa25.84■■□□□ 1.73
SVIL-211ENST00000490031 URB2Q14146 1524 aaKnown RBP25.75■■□□□ 1.71
SVIL-211ENST00000490031 DNAJC5Q9H3Z4 198 aa25.58■■□□□ 1.69
SVIL-211ENST00000490031 TOPBP1Q92547 1522 aa25.57■■□□□ 1.68
SVIL-211ENST00000490031 ABCC8Q09428 1581 aa25.54■■□□□ 1.68
SVIL-211ENST00000490031 DNMBPQ6XZF7 1577 aa25.51■■□□□ 1.67
SVIL-211ENST00000490031 IFT140Q96RY7 1462 aa25.44■■□□□ 1.66
SVIL-211ENST00000490031 ZNF608Q9ULD9 1512 aaPredicted RBP25.36■■□□□ 1.65
SVIL-211ENST00000490031 POLA1P09884 1462 aaPredicted RBP25.34■■□□□ 1.65
SVIL-211ENST00000490031 CUX1P39880 1505 aa25.32■■□□□ 1.64
SVIL-211ENST00000490031 TARBP1Q13395 1621 aaKnown RBP25.28■■□□□ 1.64
SVIL-211ENST00000490031 FGD5Q6ZNL6 1462 aa25.27■■□□□ 1.64
SVIL-211ENST00000490031 SOGA1O94964 1423 aa25.26■■□□□ 1.63
SVIL-211ENST00000490031 RAD54L2Q9Y4B4 1467 aa25.26■■□□□ 1.63
SVIL-211ENST00000490031 EIF4G3O43432 1585 aaKnown RBP25.22■■□□□ 1.63
SVIL-211ENST00000490031 AQRO60306 1485 aaKnown RBP eCLIP25.21■■□□□ 1.63
SVIL-211ENST00000490031 TDRD9Q8NDG6 1382 aaKnown RBP25.15■■□□□ 1.62
SVIL-211ENST00000490031 OSCARQ8IYS5 282 aa25.13■■□□□ 1.61
SVIL-211ENST00000490031 WRNQ14191 1432 aaPredicted RBP eCLIP25.12■■□□□ 1.61
SVIL-211ENST00000490031 SYNJ1O43426 1573 aa25.05■■□□□ 1.6
SVIL-211ENST00000490031 TOP2BQ02880 1626 aa25.05■■□□□ 1.6
SVIL-211ENST00000490031 WDR97A6NE52 1622 aa25.04■■□□□ 1.6
SVIL-211ENST00000490031 BIVM-ERCC5R4GMW8 1640 aa25.04■■□□□ 1.6
SVIL-211ENST00000490031 ABCA10Q8WWZ4 1543 aa25■■□□□ 1.59
SVIL-211ENST00000490031 FBLN2P98095 1184 aa24.98■■□□□ 1.59
SVIL-211ENST00000490031 GRIN2BQ13224 1484 aa24.96■■□□□ 1.59
SVIL-211ENST00000490031 GAPVD1Q14C86 1478 aa24.96■■□□□ 1.59
SVIL-211ENST00000490031 SNAPC4Q5SXM2 1469 aa24.96■■□□□ 1.59
SVIL-211ENST00000490031 CHD1O14646 1710 aa24.92■■□□□ 1.58
SVIL-211ENST00000490031 MAGI1Q96QZ7 1491 aaPredicted RBP24.9■■□□□ 1.58
SVIL-211ENST00000490031 ABCA5Q8WWZ7 1642 aa24.9■■□□□ 1.58
SVIL-211ENST00000490031 PBRM1Q86U86 1689 aa24.87■■□□□ 1.57
SVIL-211ENST00000490031 CHMP7Q8WUX9 453 aaPredicted RBP24.86■■□□□ 1.57
SVIL-211ENST00000490031 SYNJ2O15056 1496 aa24.82■■□□□ 1.56
SVIL-211ENST00000490031 TRIM41Q8WV44 630 aa24.74■■□□□ 1.55
SVIL-211ENST00000490031 RIMBP3CA6NJZ7 1639 aa24.7■■□□□ 1.54
SVIL-211ENST00000490031 RIMBP3BA6NNM3 1639 aa24.7■■□□□ 1.54
SVIL-211ENST00000490031 RIMBP3Q9UFD9 1639 aa24.7■■□□□ 1.54
SVIL-211ENST00000490031 ARHGEF11O15085 1522 aa24.7■■□□□ 1.54
SVIL-211ENST00000490031 ERICH3Q5RHP9 1530 aa24.69■■□□□ 1.54
SVIL-211ENST00000490031 ADAMTS12P58397 1594 aa24.68■■□□□ 1.54
SVIL-211ENST00000490031 FHAD1B1AJZ9 1412 aa24.66■■□□□ 1.54
SVIL-211ENST00000490031 CLASP1Q7Z460 1538 aa24.65■■□□□ 1.54
SVIL-211ENST00000490031 GRIN2AQ12879 1464 aa24.64■■□□□ 1.54
SVIL-211ENST00000490031 KIF27Q86VH2 1401 aa24.61■■□□□ 1.53
SVIL-211ENST00000490031 CYB5RLQ6IPT4 315 aa24.53■■□□□ 1.52
SVIL-211ENST00000490031 IGF1RP08069 1367 aa24.53■■□□□ 1.52
SVIL-211ENST00000490031 NUP160Q12769 1436 aa24.52■■□□□ 1.52
SVIL-211ENST00000490031 CEP170Q5SW79 1584 aa24.52■■□□□ 1.52
SVIL-211ENST00000490031 ARAP1Q96P48 1450 aa24.49■■□□□ 1.51
SVIL-211ENST00000490031 CUL7Q14999 1698 aa24.43■■□□□ 1.5
SVIL-211ENST00000490031 CARMIL1Q5VZK9 1371 aa24.39■■□□□ 1.49
SVIL-211ENST00000490031 RUSC2Q8N2Y8 1516 aa24.35■■□□□ 1.49
SVIL-211ENST00000490031 SHROOM2Q13796 1616 aa24.33■■□□□ 1.49
SVIL-211ENST00000490031 ERCC6L2Q5T890 1561 aa24.33■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms