RNA–Protein interactions for RNA: ENST00000490017.1

MMP23B-208, Transcript of matrix metallopeptidase 23B, humanhuman

TSL 3

Gene MMP23B, Length 530 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP23B-208ENST00000490017 NISCHQ9Y2I1 1504 aa35.03■■■■□ 3.2
MMP23B-208ENST00000490017 CCDC180Q9P1Z9 1646 aa31.22■■■□□ 2.59
MMP23B-208ENST00000490017 ABCC9O60706 1549 aa30.85■■■□□ 2.53
MMP23B-208ENST00000490017 RB1CC1Q8TDY2 1594 aa29.55■■■□□ 2.32
MMP23B-208ENST00000490017 DCAF8L2P0C7V8 631 aa29.54■■■□□ 2.32
MMP23B-208ENST00000490017 NACADO15069 1562 aa29.45■■■□□ 2.31
MMP23B-208ENST00000490017 MYO15BQ96JP2 1530 aa29.15■■■□□ 2.26
MMP23B-208ENST00000490017 ZCCHC6Q5VYS8 1495 aaKnown RBP29.09■■■□□ 2.25
MMP23B-208ENST00000490017 DCAF1Q9Y4B6 1507 aa28.94■■■□□ 2.22
MMP23B-208ENST00000490017 UNC13AQ9UPW8 1703 aa28.85■■■□□ 2.21
MMP23B-208ENST00000490017 PABPN1Q86U42 306 aaKnown RBP eCLIP28.84■■■□□ 2.21
MMP23B-208ENST00000490017 BICRAQ9NZM4 1560 aa28.62■■■□□ 2.17
MMP23B-208ENST00000490017 DNAJC5BQ9UF47 199 aa28.57■■■□□ 2.16
MMP23B-208ENST00000490017 SCRIBQ14160 1630 aa28.51■■■□□ 2.15
MMP23B-208ENST00000490017 SHROOM4Q9ULL8 1493 aa28.29■■■□□ 2.12
MMP23B-208ENST00000490017 EIF4G1Q04637 1599 aaKnown RBP27.9■■■□□ 2.06
MMP23B-208ENST00000490017 CC2D2AQ9P2K1 1620 aa27.88■■■□□ 2.05
MMP23B-208ENST00000490017 CECR2Q9BXF3 1484 aa27.75■■■□□ 2.03
MMP23B-208ENST00000490017 SMARCA4P51532 1647 aa27.23■■□□□ 1.95
MMP23B-208ENST00000490017 NCAPD3P42695 1498 aa27.18■■□□□ 1.94
MMP23B-208ENST00000490017 BAZ1AQ9NRL2 1556 aaPredicted RBP27.18■■□□□ 1.94
MMP23B-208ENST00000490017 ATAD2BQ9ULI0 1458 aa27.16■■□□□ 1.94
MMP23B-208ENST00000490017 SMARCA2P51531 1590 aa27.11■■□□□ 1.93
MMP23B-208ENST00000490017 MROH2BQ7Z745 1585 aa27■■□□□ 1.91
MMP23B-208ENST00000490017 HMGXB3Q12766 1538 aa26.99■■□□□ 1.91
MMP23B-208ENST00000490017 BAZ1BQ9UIG0 1483 aaKnown RBP26.93■■□□□ 1.9
MMP23B-208ENST00000490017 PEG3Q9GZU2 1588 aa26.93■■□□□ 1.9
MMP23B-208ENST00000490017 WIZO95785 1651 aa26.7■■□□□ 1.87
MMP23B-208ENST00000490017 ERCC6Q03468 1493 aa26.63■■□□□ 1.85
MMP23B-208ENST00000490017 NESP48681 1621 aa26.61■■□□□ 1.85
MMP23B-208ENST00000490017 RSF1Q96T23 1441 aaPredicted RBP26.61■■□□□ 1.85
MMP23B-208ENST00000490017 LAMC3Q9Y6N6 1575 aa26.5■■□□□ 1.83
MMP23B-208ENST00000490017 CADPSQ9ULU8 1353 aa26.4■■□□□ 1.82
MMP23B-208ENST00000490017 CUX2O14529 1486 aa26.4■■□□□ 1.82
MMP23B-208ENST00000490017 TOP2AP11388 1531 aaKnown RBP26.38■■□□□ 1.81
MMP23B-208ENST00000490017 PDS5BQ9NTI5 1447 aa26.37■■□□□ 1.81
MMP23B-208ENST00000490017 KIF21AQ7Z4S6 1674 aa26.27■■□□□ 1.8
MMP23B-208ENST00000490017 THOC2Q8NI27 1593 aaKnown RBP26.2■■□□□ 1.79
MMP23B-208ENST00000490017 CFTRP13569 1480 aa26.17■■□□□ 1.78
MMP23B-208ENST00000490017 CCDC88BA6NC98 1476 aa26.11■■□□□ 1.77
MMP23B-208ENST00000490017 FANCD2Q9BXW9 1451 aa26.09■■□□□ 1.77
MMP23B-208ENST00000490017 MRC2Q9UBG0 1479 aa26.07■■□□□ 1.76
MMP23B-208ENST00000490017 CEP164Q9UPV0 1460 aa26.07■■□□□ 1.76
MMP23B-208ENST00000490017 WDR62O43379 1518 aa25.97■■□□□ 1.75
MMP23B-208ENST00000490017 DNAJC5Q9H3Z4 198 aa25.94■■□□□ 1.74
MMP23B-208ENST00000490017 PRDM2Q13029 1718 aa25.91■■□□□ 1.74
MMP23B-208ENST00000490017 SUPT5HO00267 1087 aaKnown RBP25.86■■□□□ 1.73
MMP23B-208ENST00000490017 URB2Q14146 1524 aaKnown RBP25.82■■□□□ 1.72
MMP23B-208ENST00000490017 ABCC8Q09428 1581 aa25.64■■□□□ 1.69
MMP23B-208ENST00000490017 TOPBP1Q92547 1522 aa25.63■■□□□ 1.69
MMP23B-208ENST00000490017 DNMBPQ6XZF7 1577 aa25.56■■□□□ 1.68
MMP23B-208ENST00000490017 IFT140Q96RY7 1462 aa25.53■■□□□ 1.68
MMP23B-208ENST00000490017 ZNF608Q9ULD9 1512 aaPredicted RBP25.44■■□□□ 1.66
MMP23B-208ENST00000490017 POLA1P09884 1462 aaPredicted RBP25.39■■□□□ 1.65
MMP23B-208ENST00000490017 OSCARQ8IYS5 282 aa25.36■■□□□ 1.65
MMP23B-208ENST00000490017 TARBP1Q13395 1621 aaKnown RBP25.35■■□□□ 1.65
MMP23B-208ENST00000490017 SOGA1O94964 1423 aa25.34■■□□□ 1.65
MMP23B-208ENST00000490017 CUX1P39880 1505 aa25.33■■□□□ 1.65
MMP23B-208ENST00000490017 RAD54L2Q9Y4B4 1467 aa25.31■■□□□ 1.64
MMP23B-208ENST00000490017 AQRO60306 1485 aaKnown RBP eCLIP25.3■■□□□ 1.64
MMP23B-208ENST00000490017 FGD5Q6ZNL6 1462 aa25.3■■□□□ 1.64
MMP23B-208ENST00000490017 EIF4G3O43432 1585 aaKnown RBP25.3■■□□□ 1.64
MMP23B-208ENST00000490017 TDRD9Q8NDG6 1382 aaKnown RBP25.22■■□□□ 1.63
MMP23B-208ENST00000490017 FBLN2P98095 1184 aa25.13■■□□□ 1.61
MMP23B-208ENST00000490017 WDR97A6NE52 1622 aa25.12■■□□□ 1.61
MMP23B-208ENST00000490017 WRNQ14191 1432 aaPredicted RBP eCLIP25.11■■□□□ 1.61
MMP23B-208ENST00000490017 TOP2BQ02880 1626 aa25.05■■□□□ 1.6
MMP23B-208ENST00000490017 GRIN2BQ13224 1484 aa25.04■■□□□ 1.6
MMP23B-208ENST00000490017 CHD1O14646 1710 aa25.04■■□□□ 1.6
MMP23B-208ENST00000490017 ABCA10Q8WWZ4 1543 aa25.04■■□□□ 1.6
MMP23B-208ENST00000490017 BIVM-ERCC5R4GMW8 1640 aa25.04■■□□□ 1.6
MMP23B-208ENST00000490017 SNAPC4Q5SXM2 1469 aa25.02■■□□□ 1.6
MMP23B-208ENST00000490017 SYNJ1O43426 1573 aa25.02■■□□□ 1.6
MMP23B-208ENST00000490017 TRIM41Q8WV44 630 aa25.02■■□□□ 1.6
MMP23B-208ENST00000490017 GAPVD1Q14C86 1478 aa25.02■■□□□ 1.6
MMP23B-208ENST00000490017 CHMP7Q8WUX9 453 aaPredicted RBP25■■□□□ 1.59
MMP23B-208ENST00000490017 MAGI1Q96QZ7 1491 aaPredicted RBP24.98■■□□□ 1.59
MMP23B-208ENST00000490017 PBRM1Q86U86 1689 aa24.94■■□□□ 1.58
MMP23B-208ENST00000490017 ABCA5Q8WWZ7 1642 aa24.94■■□□□ 1.58
MMP23B-208ENST00000490017 SYNJ2O15056 1496 aa24.89■■□□□ 1.57
MMP23B-208ENST00000490017 RIMBP3CA6NJZ7 1639 aa24.88■■□□□ 1.57
MMP23B-208ENST00000490017 RIMBP3BA6NNM3 1639 aa24.88■■□□□ 1.57
MMP23B-208ENST00000490017 RIMBP3Q9UFD9 1639 aa24.88■■□□□ 1.57
MMP23B-208ENST00000490017 ARHGEF11O15085 1522 aa24.85■■□□□ 1.57
MMP23B-208ENST00000490017 CYB5RLQ6IPT4 315 aa24.74■■□□□ 1.55
MMP23B-208ENST00000490017 CLASP1Q7Z460 1538 aa24.74■■□□□ 1.55
MMP23B-208ENST00000490017 ERICH3Q5RHP9 1530 aa24.73■■□□□ 1.55
MMP23B-208ENST00000490017 FHAD1B1AJZ9 1412 aa24.71■■□□□ 1.55
MMP23B-208ENST00000490017 ADAMTS12P58397 1594 aa24.71■■□□□ 1.55
MMP23B-208ENST00000490017 GRIN2AQ12879 1464 aa24.7■■□□□ 1.55
MMP23B-208ENST00000490017 KIF27Q86VH2 1401 aa24.62■■□□□ 1.53
MMP23B-208ENST00000490017 ARAP1Q96P48 1450 aa24.62■■□□□ 1.53
MMP23B-208ENST00000490017 NUP160Q12769 1436 aa24.58■■□□□ 1.53
MMP23B-208ENST00000490017 CEP170Q5SW79 1584 aa24.57■■□□□ 1.52
MMP23B-208ENST00000490017 IGF1RP08069 1367 aa24.55■■□□□ 1.52
MMP23B-208ENST00000490017 CUL7Q14999 1698 aa24.45■■□□□ 1.5
MMP23B-208ENST00000490017 JPH4Q96JJ6 628 aa24.43■■□□□ 1.5
MMP23B-208ENST00000490017 CARMIL1Q5VZK9 1371 aa24.42■■□□□ 1.5
MMP23B-208ENST00000490017 SHROOM2Q13796 1616 aa24.41■■□□□ 1.5
MMP23B-208ENST00000490017 ERCC6L2Q5T890 1561 aa24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms