RNA–Protein interactions for RNA: ENST00000489906.5

VDAC1-206, Transcript of voltage dependent anion channel 1, humanhuman

TSL 2

Gene VDAC1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDAC1-206ENST00000489906 NISCHQ9Y2I1 1504 aa31.84■■■□□ 2.69
VDAC1-206ENST00000489906 ABCC9O60706 1549 aa28.96■■■□□ 2.23
VDAC1-206ENST00000489906 CCDC180Q9P1Z9 1646 aa28.58■■■□□ 2.17
VDAC1-206ENST00000489906 DNAJC5BQ9UF47 199 aa27.36■■□□□ 1.97
VDAC1-206ENST00000489906 RB1CC1Q8TDY2 1594 aa27.35■■□□□ 1.97
VDAC1-206ENST00000489906 DCAF8L2P0C7V8 631 aa27.16■■□□□ 1.94
VDAC1-206ENST00000489906 NACADO15069 1562 aa27.08■■□□□ 1.93
VDAC1-206ENST00000489906 PABPN1Q86U42 306 aaKnown RBP eCLIP26.98■■□□□ 1.91
VDAC1-206ENST00000489906 UNC13AQ9UPW8 1703 aa26.77■■□□□ 1.88
VDAC1-206ENST00000489906 BICRAQ9NZM4 1560 aa26.59■■□□□ 1.85
VDAC1-206ENST00000489906 MYO15BQ96JP2 1530 aa26.55■■□□□ 1.84
VDAC1-206ENST00000489906 ZCCHC6Q5VYS8 1495 aaKnown RBP26.33■■□□□ 1.81
VDAC1-206ENST00000489906 SCRIBQ14160 1630 aa26.2■■□□□ 1.78
VDAC1-206ENST00000489906 DCAF1Q9Y4B6 1507 aa26.18■■□□□ 1.78
VDAC1-206ENST00000489906 CC2D2AQ9P2K1 1620 aa26.08■■□□□ 1.77
VDAC1-206ENST00000489906 CECR2Q9BXF3 1484 aa26.05■■□□□ 1.76
VDAC1-206ENST00000489906 SHROOM4Q9ULL8 1493 aa26.05■■□□□ 1.76
VDAC1-206ENST00000489906 EIF4G1Q04637 1599 aaKnown RBP25.96■■□□□ 1.75
VDAC1-206ENST00000489906 DNAJC5Q9H3Z4 198 aa25.17■■□□□ 1.62
VDAC1-206ENST00000489906 NCAPD3P42695 1498 aa25.02■■□□□ 1.6
VDAC1-206ENST00000489906 ERCC6Q03468 1493 aa24.99■■□□□ 1.59
VDAC1-206ENST00000489906 ATAD2BQ9ULI0 1458 aa24.96■■□□□ 1.59
VDAC1-206ENST00000489906 CUX2O14529 1486 aa24.89■■□□□ 1.58
VDAC1-206ENST00000489906 SMARCA4P51532 1647 aa24.89■■□□□ 1.57
VDAC1-206ENST00000489906 SMARCA2P51531 1590 aa24.84■■□□□ 1.57
VDAC1-206ENST00000489906 NESP48681 1621 aa24.83■■□□□ 1.56
VDAC1-206ENST00000489906 HMGXB3Q12766 1538 aa24.8■■□□□ 1.56
VDAC1-206ENST00000489906 BAZ1BQ9UIG0 1483 aaKnown RBP24.73■■□□□ 1.55
VDAC1-206ENST00000489906 BAZ1AQ9NRL2 1556 aaPredicted RBP24.7■■□□□ 1.54
VDAC1-206ENST00000489906 MROH2BQ7Z745 1585 aa24.59■■□□□ 1.53
VDAC1-206ENST00000489906 PEG3Q9GZU2 1588 aa24.56■■□□□ 1.52
VDAC1-206ENST00000489906 THOC2Q8NI27 1593 aaKnown RBP24.52■■□□□ 1.52
VDAC1-206ENST00000489906 LAMC3Q9Y6N6 1575 aa24.48■■□□□ 1.51
VDAC1-206ENST00000489906 KIF21AQ7Z4S6 1674 aa24.45■■□□□ 1.5
VDAC1-206ENST00000489906 PDS5BQ9NTI5 1447 aa24.37■■□□□ 1.49
VDAC1-206ENST00000489906 WIZO95785 1651 aa24.3■■□□□ 1.48
VDAC1-206ENST00000489906 CADPSQ9ULU8 1353 aa24.29■■□□□ 1.48
VDAC1-206ENST00000489906 MRC2Q9UBG0 1479 aa24.2■■□□□ 1.47
VDAC1-206ENST00000489906 TRIM41Q8WV44 630 aa24.15■■□□□ 1.46
VDAC1-206ENST00000489906 WDR62O43379 1518 aa24.12■■□□□ 1.45
VDAC1-206ENST00000489906 CEP164Q9UPV0 1460 aa24.07■■□□□ 1.44
VDAC1-206ENST00000489906 FANCD2Q9BXW9 1451 aa24.04■■□□□ 1.44
VDAC1-206ENST00000489906 RSF1Q96T23 1441 aaPredicted RBP23.99■■□□□ 1.43
VDAC1-206ENST00000489906 CFTRP13569 1480 aa23.95■■□□□ 1.42
VDAC1-206ENST00000489906 TOP2AP11388 1531 aaKnown RBP23.91■■□□□ 1.42
VDAC1-206ENST00000489906 URB2Q14146 1524 aaKnown RBP23.87■■□□□ 1.41
VDAC1-206ENST00000489906 OSCARQ8IYS5 282 aa23.79■■□□□ 1.4
VDAC1-206ENST00000489906 CCDC88BA6NC98 1476 aa23.68■■□□□ 1.38
VDAC1-206ENST00000489906 PRDM2Q13029 1718 aa23.66■■□□□ 1.38
VDAC1-206ENST00000489906 ZNF608Q9ULD9 1512 aaPredicted RBP23.64■■□□□ 1.38
VDAC1-206ENST00000489906 IFT140Q96RY7 1462 aa23.57■■□□□ 1.36
VDAC1-206ENST00000489906 TOPBP1Q92547 1522 aa23.56■■□□□ 1.36
VDAC1-206ENST00000489906 RIMBP3CA6NJZ7 1639 aa23.52■■□□□ 1.36
VDAC1-206ENST00000489906 RIMBP3BA6NNM3 1639 aa23.52■■□□□ 1.36
VDAC1-206ENST00000489906 RIMBP3Q9UFD9 1639 aa23.52■■□□□ 1.36
VDAC1-206ENST00000489906 EIF4G3O43432 1585 aaKnown RBP23.46■■□□□ 1.35
VDAC1-206ENST00000489906 DNMBPQ6XZF7 1577 aa23.44■■□□□ 1.34
VDAC1-206ENST00000489906 ARHGEF11O15085 1522 aa23.43■■□□□ 1.34
VDAC1-206ENST00000489906 AQRO60306 1485 aaKnown RBP eCLIP23.41■■□□□ 1.342e-15■■■■■ 60.6
VDAC1-206ENST00000489906 ABCC8Q09428 1581 aa23.4■■□□□ 1.34
VDAC1-206ENST00000489906 FBLN2P98095 1184 aa23.36■■□□□ 1.33
VDAC1-206ENST00000489906 TARBP1Q13395 1621 aaKnown RBP23.34■■□□□ 1.33
VDAC1-206ENST00000489906 CYB5RLQ6IPT4 315 aa23.34■■□□□ 1.33
VDAC1-206ENST00000489906 CHD1O14646 1710 aa23.33■■□□□ 1.33
VDAC1-206ENST00000489906 POLA1P09884 1462 aaPredicted RBP23.31■■□□□ 1.32
VDAC1-206ENST00000489906 RAD54L2Q9Y4B4 1467 aa23.3■■□□□ 1.32
VDAC1-206ENST00000489906 TDRD9Q8NDG6 1382 aaKnown RBP23.25■■□□□ 1.31
VDAC1-206ENST00000489906 SOGA1O94964 1423 aa23.21■■□□□ 1.31
VDAC1-206ENST00000489906 ARAP1Q96P48 1450 aa23.19■■□□□ 1.3
VDAC1-206ENST00000489906 TRHP20396 242 aaPredicted RBP23.17■■□□□ 1.3
VDAC1-206ENST00000489906 FGD5Q6ZNL6 1462 aa23.16■■□□□ 1.3
VDAC1-206ENST00000489906 SNAPC4Q5SXM2 1469 aa23.14■■□□□ 1.29
VDAC1-206ENST00000489906 CUX1P39880 1505 aa23.1■■□□□ 1.29
VDAC1-206ENST00000489906 CHMP7Q8WUX9 453 aaPredicted RBP23.08■■□□□ 1.29
VDAC1-206ENST00000489906 CLASP1Q7Z460 1538 aa23.02■■□□□ 1.28
VDAC1-206ENST00000489906 GRIN2BQ13224 1484 aa23■■□□□ 1.27
VDAC1-206ENST00000489906 MAGI1Q96QZ7 1491 aaPredicted RBP22.98■■□□□ 1.27
VDAC1-206ENST00000489906 SYNJ1O43426 1573 aa22.98■■□□□ 1.27
VDAC1-206ENST00000489906 WDR97A6NE52 1622 aa22.97■■□□□ 1.27
VDAC1-206ENST00000489906 SYNJ2O15056 1496 aa22.94■■□□□ 1.26
VDAC1-206ENST00000489906 SUPT5HO00267 1087 aaKnown RBP22.93■■□□□ 1.26
VDAC1-206ENST00000489906 GAPVD1Q14C86 1478 aa22.92■■□□□ 1.26
VDAC1-206ENST00000489906 PBRM1Q86U86 1689 aa22.91■■□□□ 1.26
VDAC1-206ENST00000489906 ABCA5Q8WWZ7 1642 aa22.82■■□□□ 1.24
VDAC1-206ENST00000489906 ABCA10Q8WWZ4 1543 aa22.82■■□□□ 1.24
VDAC1-206ENST00000489906 ERCC6L2Q5T890 1561 aa22.75■■□□□ 1.23
VDAC1-206ENST00000489906 WRNQ14191 1432 aaPredicted RBP eCLIP22.72■■□□□ 1.23
VDAC1-206ENST00000489906 GRIN2AQ12879 1464 aa22.72■■□□□ 1.23
VDAC1-206ENST00000489906 ADAMTS12P58397 1594 aa22.68■■□□□ 1.22
VDAC1-206ENST00000489906 CEP170Q5SW79 1584 aa22.67■■□□□ 1.22
VDAC1-206ENST00000489906 TOP2BQ02880 1626 aa22.63■■□□□ 1.21
VDAC1-206ENST00000489906 BIVM-ERCC5R4GMW8 1640 aa22.62■■□□□ 1.21
VDAC1-206ENST00000489906 NUP160Q12769 1436 aa22.62■■□□□ 1.21
VDAC1-206ENST00000489906 AEBP2Q6ZN18 517 aaPredicted RBP22.61■■□□□ 1.21
VDAC1-206ENST00000489906 FHAD1B1AJZ9 1412 aa22.59■■□□□ 1.21
VDAC1-206ENST00000489906 SHROOM2Q13796 1616 aa22.53■■□□□ 1.2
VDAC1-206ENST00000489906 ERICH3Q5RHP9 1530 aa22.51■■□□□ 1.19
VDAC1-206ENST00000489906 PRG4Q92954 1404 aaPredicted RBP22.48■■□□□ 1.19
VDAC1-206ENST00000489906 JPH4Q96JJ6 628 aa22.44■■□□□ 1.18
VDAC1-206ENST00000489906 KIF13AQ9H1H9 1805 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms