RNA–Protein interactions for RNA: ENST00000489888.1

MED23-208, Transcript of mediator complex subunit 23, humanhuman

TSL 3

Gene MED23, Length 745 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED23-208ENST00000489888 NISCHQ9Y2I1 1504 aa29.9■■■□□ 2.38
MED23-208ENST00000489888 AEBP2Q6ZN18 517 aaPredicted RBP28.92■■■□□ 2.22
MED23-208ENST00000489888 CHIC1Q5VXU3 224 aa27.98■■■□□ 2.07
MED23-208ENST00000489888 CCDC180Q9P1Z9 1646 aa26.54■■□□□ 1.84
MED23-208ENST00000489888 ABCC9O60706 1549 aa25.96■■□□□ 1.75
MED23-208ENST00000489888 NACADO15069 1562 aa25.02■■□□□ 1.6
MED23-208ENST00000489888 RB1CC1Q8TDY2 1594 aa25■■□□□ 1.59
MED23-208ENST00000489888 MYO15BQ96JP2 1530 aa24.96■■□□□ 1.59
MED23-208ENST00000489888 ZCCHC6Q5VYS8 1495 aaKnown RBP24.89■■□□□ 1.57
MED23-208ENST00000489888 DCAF8L2P0C7V8 631 aa24.86■■□□□ 1.57
MED23-208ENST00000489888 DCAF1Q9Y4B6 1507 aa24.81■■□□□ 1.56
MED23-208ENST00000489888 PHF23Q9BUL5 403 aaPredicted RBP24.69■■□□□ 1.54
MED23-208ENST00000489888 SENP3Q9H4L4 574 aaPredicted RBP24.39■■□□□ 1.49
MED23-208ENST00000489888 UNC13AQ9UPW8 1703 aa24.38■■□□□ 1.49
MED23-208ENST00000489888 BICRAQ9NZM4 1560 aa24.29■■□□□ 1.48
MED23-208ENST00000489888 PABPN1Q86U42 306 aaKnown RBP eCLIP24.29■■□□□ 1.48
MED23-208ENST00000489888 SCRIBQ14160 1630 aa24.12■■□□□ 1.45
MED23-208ENST00000489888 SHROOM4Q9ULL8 1493 aa24.09■■□□□ 1.45
MED23-208ENST00000489888 DNAJC5BQ9UF47 199 aa24■■□□□ 1.43
MED23-208ENST00000489888 EIF4G1Q04637 1599 aaKnown RBP23.61■■□□□ 1.37
MED23-208ENST00000489888 CC2D2AQ9P2K1 1620 aa23.51■■□□□ 1.35
MED23-208ENST00000489888 CECR2Q9BXF3 1484 aa23.37■■□□□ 1.33
MED23-208ENST00000489888 SMARCA4P51532 1647 aa23.15■■□□□ 1.3
MED23-208ENST00000489888 NCAPD3P42695 1498 aa23.15■■□□□ 1.3
MED23-208ENST00000489888 BAZ1AQ9NRL2 1556 aaPredicted RBP23.14■■□□□ 1.3
MED23-208ENST00000489888 ATAD2BQ9ULI0 1458 aa23.11■■□□□ 1.29
MED23-208ENST00000489888 SMARCA2P51531 1590 aa23.03■■□□□ 1.28
MED23-208ENST00000489888 PEG3Q9GZU2 1588 aa23.01■■□□□ 1.27
MED23-208ENST00000489888 MROH2BQ7Z745 1585 aa23.01■■□□□ 1.27
MED23-208ENST00000489888 HMGXB3Q12766 1538 aa22.96■■□□□ 1.27
MED23-208ENST00000489888 BAZ1BQ9UIG0 1483 aaKnown RBP22.84■■□□□ 1.25
MED23-208ENST00000489888 RSF1Q96T23 1441 aaPredicted RBP22.79■■□□□ 1.24
MED23-208ENST00000489888 FOXD1Q16676 465 aa22.78■■□□□ 1.24
MED23-208ENST00000489888 WIZO95785 1651 aa22.7■■□□□ 1.22
MED23-208ENST00000489888 PLPPR3Q6T4P5 718 aa22.57■■□□□ 1.2
MED23-208ENST00000489888 TOP2AP11388 1531 aaKnown RBP22.5■■□□□ 1.19
MED23-208ENST00000489888 NESP48681 1621 aa22.48■■□□□ 1.19
MED23-208ENST00000489888 LAMC3Q9Y6N6 1575 aa22.46■■□□□ 1.19
MED23-208ENST00000489888 CADPSQ9ULU8 1353 aa22.44■■□□□ 1.18
MED23-208ENST00000489888 ERCC6Q03468 1493 aa22.35■■□□□ 1.17
MED23-208ENST00000489888 PDS5BQ9NTI5 1447 aa22.33■■□□□ 1.17
MED23-208ENST00000489888 CFTRP13569 1480 aa22.3■■□□□ 1.16
MED23-208ENST00000489888 CCDC88BA6NC98 1476 aa22.27■■□□□ 1.16
MED23-208ENST00000489888 CUX2O14529 1486 aa22.25■■□□□ 1.15
MED23-208ENST00000489888 KIF21AQ7Z4S6 1674 aa22.15■■□□□ 1.14
MED23-208ENST00000489888 THOC2Q8NI27 1593 aaKnown RBP22.15■■□□□ 1.14
MED23-208ENST00000489888 FANCD2Q9BXW9 1451 aa22.12■■□□□ 1.13
MED23-208ENST00000489888 MRC2Q9UBG0 1479 aa22.07■■□□□ 1.12
MED23-208ENST00000489888 CEP164Q9UPV0 1460 aa22.07■■□□□ 1.12
MED23-208ENST00000489888 SUPT5HO00267 1087 aaKnown RBP22.05■■□□□ 1.12
MED23-208ENST00000489888 WDR62O43379 1518 aa22.01■■□□□ 1.11
MED23-208ENST00000489888 PRDM2Q13029 1718 aa21.98■■□□□ 1.11
MED23-208ENST00000489888 URB2Q14146 1524 aaKnown RBP21.9■■□□□ 1.1
MED23-208ENST00000489888 PPP6R1Q9UPN7 881 aa21.85■■□□□ 1.09
MED23-208ENST00000489888 ABCC8Q09428 1581 aa21.81■■□□□ 1.08
MED23-208ENST00000489888 ADRA2BP18089 450 aa21.77■■□□□ 1.08
MED23-208ENST00000489888 TOPBP1Q92547 1522 aa21.76■■□□□ 1.07
MED23-208ENST00000489888 DNMBPQ6XZF7 1577 aa21.72■■□□□ 1.07
MED23-208ENST00000489888 IFT140Q96RY7 1462 aa21.66■■□□□ 1.06
MED23-208ENST00000489888 DNAJC5Q9H3Z4 198 aa21.66■■□□□ 1.06
MED23-208ENST00000489888 POLA1P09884 1462 aaPredicted RBP21.58■■□□□ 1.05
MED23-208ENST00000489888 CUX1P39880 1505 aa21.58■■□□□ 1.04
MED23-208ENST00000489888 TARBP1Q13395 1621 aaKnown RBP21.53■■□□□ 1.04
MED23-208ENST00000489888 ZNF608Q9ULD9 1512 aaPredicted RBP21.53■■□□□ 1.04
MED23-208ENST00000489888 SOGA1O94964 1423 aa21.5■■□□□ 1.03
MED23-208ENST00000489888 FGD5Q6ZNL6 1462 aa21.49■■□□□ 1.03
MED23-208ENST00000489888 RAD54L2Q9Y4B4 1467 aa21.47■■□□□ 1.03
MED23-208ENST00000489888 WRNQ14191 1432 aaPredicted RBP eCLIP21.44■■□□□ 1.02
MED23-208ENST00000489888 AQRO60306 1485 aaKnown RBP eCLIP21.42■■□□□ 1.022e-7■□□□□ 9
MED23-208ENST00000489888 WDR97A6NE52 1622 aa21.4■■□□□ 1.02
MED23-208ENST00000489888 TOP2BQ02880 1626 aa21.39■■□□□ 1.01
MED23-208ENST00000489888 EIF4G3O43432 1585 aaKnown RBP21.38■■□□□ 1.01
MED23-208ENST00000489888 BIVM-ERCC5R4GMW8 1640 aa21.37■■□□□ 1.01
MED23-208ENST00000489888 TDRD9Q8NDG6 1382 aaKnown RBP21.36■■□□□ 1.01
MED23-208ENST00000489888 ABCA10Q8WWZ4 1543 aa21.34■■□□□ 1.01
MED23-208ENST00000489888 OSCARQ8IYS5 282 aa21.34■■□□□ 1.01
MED23-208ENST00000489888 PIAS4Q8N2W9 510 aaPredicted RBP21.34■■□□□ 1.01
MED23-208ENST00000489888 SYNJ1O43426 1573 aa21.33■■□□□ 1.01
MED23-208ENST00000489888 GRIN2BQ13224 1484 aa21.25■□□□□ 0.99
MED23-208ENST00000489888 GAPVD1Q14C86 1478 aa21.25■□□□□ 0.99
MED23-208ENST00000489888 ABCA5Q8WWZ7 1642 aa21.21■□□□□ 0.99
MED23-208ENST00000489888 MAGI1Q96QZ7 1491 aaPredicted RBP21.2■□□□□ 0.98
MED23-208ENST00000489888 SNAPC4Q5SXM2 1469 aa21.18■□□□□ 0.98
MED23-208ENST00000489888 SYNJ2O15056 1496 aa21.12■□□□□ 0.97
MED23-208ENST00000489888 CHMP7Q8WUX9 453 aaPredicted RBP21.1■□□□□ 0.97
MED23-208ENST00000489888 PBRM1Q86U86 1689 aa21.09■□□□□ 0.97
MED23-208ENST00000489888 CHD1O14646 1710 aa21.09■□□□□ 0.97
MED23-208ENST00000489888 FBLN2P98095 1184 aa21.08■□□□□ 0.97
MED23-208ENST00000489888 ERICH3Q5RHP9 1530 aa21.08■□□□□ 0.96
MED23-208ENST00000489888 FHAD1B1AJZ9 1412 aa21.03■□□□□ 0.96
MED23-208ENST00000489888 KIF27Q86VH2 1401 aa21■□□□□ 0.95
MED23-208ENST00000489888 IGF1RP08069 1367 aa20.99■□□□□ 0.95
MED23-208ENST00000489888 ADAMTS12P58397 1594 aa20.98■□□□□ 0.95
MED23-208ENST00000489888 CLASP1Q7Z460 1538 aa20.97■□□□□ 0.95
MED23-208ENST00000489888 GRIN2AQ12879 1464 aa20.96■□□□□ 0.95
MED23-208ENST00000489888 NUP160Q12769 1436 aa20.94■□□□□ 0.94
MED23-208ENST00000489888 MSH5O43196 834 aa20.93■□□□□ 0.94
MED23-208ENST00000489888 ARHGEF11O15085 1522 aa20.92■□□□□ 0.94
MED23-208ENST00000489888 RIMBP3CA6NJZ7 1639 aa20.89■□□□□ 0.94
MED23-208ENST00000489888 RIMBP3BA6NNM3 1639 aa20.89■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms