RNA–Protein interactions for RNA: ENST00000489789.3

CNTNAP3B-209, Transcript of contactin associated protein like 3B, humanhuman

TSL 5

Gene CNTNAP3B, Length 501 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-209ENST00000489789 AEBP2Q6ZN18 517 aaPredicted RBP15.16■□□□□ 0.02
CNTNAP3B-209ENST00000489789 NISCHQ9Y2I1 1504 aa14.72□□□□□ -0.05
CNTNAP3B-209ENST00000489789 CHIC1Q5VXU3 224 aa14.55□□□□□ -0.08
CNTNAP3B-209ENST00000489789 CCDC180Q9P1Z9 1646 aa13.13□□□□□ -0.31
CNTNAP3B-209ENST00000489789 ABCC9O60706 1549 aa13.04□□□□□ -0.32
CNTNAP3B-209ENST00000489789 PHF23Q9BUL5 403 aaPredicted RBP12.84□□□□□ -0.35
CNTNAP3B-209ENST00000489789 SENP3Q9H4L4 574 aaPredicted RBP12.79□□□□□ -0.36
CNTNAP3B-209ENST00000489789 DCAF8L2P0C7V8 631 aa12.59□□□□□ -0.39
CNTNAP3B-209ENST00000489789 RB1CC1Q8TDY2 1594 aa12.43□□□□□ -0.42
CNTNAP3B-209ENST00000489789 NACADO15069 1562 aa12.35□□□□□ -0.43
CNTNAP3B-209ENST00000489789 UNC13AQ9UPW8 1703 aa12.23□□□□□ -0.45
CNTNAP3B-209ENST00000489789 PABPN1Q86U42 306 aaKnown RBP eCLIP12.21□□□□□ -0.45
CNTNAP3B-209ENST00000489789 ZCCHC6Q5VYS8 1495 aaKnown RBP12.21□□□□□ -0.46
CNTNAP3B-209ENST00000489789 MYO15BQ96JP2 1530 aa12.13□□□□□ -0.47
CNTNAP3B-209ENST00000489789 DCAF1Q9Y4B6 1507 aa12.08□□□□□ -0.48
CNTNAP3B-209ENST00000489789 SCRIBQ14160 1630 aa12.08□□□□□ -0.48
CNTNAP3B-209ENST00000489789 DNAJC5BQ9UF47 199 aa12.04□□□□□ -0.48
CNTNAP3B-209ENST00000489789 BICRAQ9NZM4 1560 aa12.04□□□□□ -0.48
CNTNAP3B-209ENST00000489789 FOXD1Q16676 465 aa11.97□□□□□ -0.49
CNTNAP3B-209ENST00000489789 SHROOM4Q9ULL8 1493 aa11.76□□□□□ -0.53
CNTNAP3B-209ENST00000489789 CC2D2AQ9P2K1 1620 aa11.76□□□□□ -0.53
CNTNAP3B-209ENST00000489789 EIF4G1Q04637 1599 aaKnown RBP11.75□□□□□ -0.53
CNTNAP3B-209ENST00000489789 PLPPR3Q6T4P5 718 aa11.68□□□□□ -0.54
CNTNAP3B-209ENST00000489789 CECR2Q9BXF3 1484 aa11.68□□□□□ -0.54
CNTNAP3B-209ENST00000489789 SMARCA4P51532 1647 aa11.47□□□□□ -0.57
CNTNAP3B-209ENST00000489789 BAZ1AQ9NRL2 1556 aaPredicted RBP11.42□□□□□ -0.58
CNTNAP3B-209ENST00000489789 PPP6R1Q9UPN7 881 aa11.41□□□□□ -0.58
CNTNAP3B-209ENST00000489789 ATAD2BQ9ULI0 1458 aa11.4□□□□□ -0.58
CNTNAP3B-209ENST00000489789 SMARCA2P51531 1590 aa11.38□□□□□ -0.59
CNTNAP3B-209ENST00000489789 MROH2BQ7Z745 1585 aa11.38□□□□□ -0.59
CNTNAP3B-209ENST00000489789 ADRA2BP18089 450 aa11.38□□□□□ -0.59
CNTNAP3B-209ENST00000489789 NCAPD3P42695 1498 aa11.38□□□□□ -0.59
CNTNAP3B-209ENST00000489789 BAZ1BQ9UIG0 1483 aaKnown RBP11.35□□□□□ -0.59
CNTNAP3B-209ENST00000489789 WIZO95785 1651 aa11.32□□□□□ -0.6
CNTNAP3B-209ENST00000489789 HMGXB3Q12766 1538 aa11.3□□□□□ -0.6
CNTNAP3B-209ENST00000489789 PEG3Q9GZU2 1588 aa11.27□□□□□ -0.61
CNTNAP3B-209ENST00000489789 NESP48681 1621 aa11.25□□□□□ -0.61
CNTNAP3B-209ENST00000489789 DNAJC5Q9H3Z4 198 aa11.25□□□□□ -0.61
CNTNAP3B-209ENST00000489789 ERCC6Q03468 1493 aa11.25□□□□□ -0.61
CNTNAP3B-209ENST00000489789 PIAS4Q8N2W9 510 aaPredicted RBP11.22□□□□□ -0.61
CNTNAP3B-209ENST00000489789 RSF1Q96T23 1441 aaPredicted RBP11.18□□□□□ -0.62
CNTNAP3B-209ENST00000489789 KIF21AQ7Z4S6 1674 aa11.14□□□□□ -0.63
CNTNAP3B-209ENST00000489789 LAMC3Q9Y6N6 1575 aa11.13□□□□□ -0.63
CNTNAP3B-209ENST00000489789 TOP2AP11388 1531 aaKnown RBP11.1□□□□□ -0.63
CNTNAP3B-209ENST00000489789 CADPSQ9ULU8 1353 aa11.07□□□□□ -0.64
CNTNAP3B-209ENST00000489789 PDS5BQ9NTI5 1447 aa11.06□□□□□ -0.64
CNTNAP3B-209ENST00000489789 CUX2O14529 1486 aa11.05□□□□□ -0.64
CNTNAP3B-209ENST00000489789 THOC2Q8NI27 1593 aaKnown RBP11.03□□□□□ -0.64
CNTNAP3B-209ENST00000489789 SUPT5HO00267 1087 aaKnown RBP11.02□□□□□ -0.65
CNTNAP3B-209ENST00000489789 MSH5O43196 834 aa11.02□□□□□ -0.65
CNTNAP3B-209ENST00000489789 CCDC88BA6NC98 1476 aa11□□□□□ -0.65
CNTNAP3B-209ENST00000489789 FANCD2Q9BXW9 1451 aa10.98□□□□□ -0.65
CNTNAP3B-209ENST00000489789 CEP164Q9UPV0 1460 aa10.97□□□□□ -0.65
CNTNAP3B-209ENST00000489789 PRDM2Q13029 1718 aa10.97□□□□□ -0.65
CNTNAP3B-209ENST00000489789 CFTRP13569 1480 aa10.96□□□□□ -0.65
CNTNAP3B-209ENST00000489789 MRC2Q9UBG0 1479 aa10.96□□□□□ -0.65
CNTNAP3B-209ENST00000489789 WDR62O43379 1518 aa10.9□□□□□ -0.66
CNTNAP3B-209ENST00000489789 URB2Q14146 1524 aaKnown RBP10.87□□□□□ -0.67
CNTNAP3B-209ENST00000489789 TOPBP1Q92547 1522 aa10.79□□□□□ -0.68
CNTNAP3B-209ENST00000489789 DNMBPQ6XZF7 1577 aa10.76□□□□□ -0.69
CNTNAP3B-209ENST00000489789 ABCC8Q09428 1581 aa10.74□□□□□ -0.69
CNTNAP3B-209ENST00000489789 ZNF608Q9ULD9 1512 aaPredicted RBP10.73□□□□□ -0.69
CNTNAP3B-209ENST00000489789 IFT140Q96RY7 1462 aa10.72□□□□□ -0.69
CNTNAP3B-209ENST00000489789 RAD54L2Q9Y4B4 1467 aa10.7□□□□□ -0.7
CNTNAP3B-209ENST00000489789 EIF4G3O43432 1585 aaKnown RBP10.68□□□□□ -0.7
CNTNAP3B-209ENST00000489789 AQRO60306 1485 aaKnown RBP eCLIP10.68□□□□□ -0.7
CNTNAP3B-209ENST00000489789 POLA1P09884 1462 aaPredicted RBP10.68□□□□□ -0.7
CNTNAP3B-209ENST00000489789 FGD5Q6ZNL6 1462 aa10.68□□□□□ -0.7
CNTNAP3B-209ENST00000489789 SOGA1O94964 1423 aa10.67□□□□□ -0.7
CNTNAP3B-209ENST00000489789 TARBP1Q13395 1621 aaKnown RBP10.67□□□□□ -0.7
CNTNAP3B-209ENST00000489789 FBLN2P98095 1184 aa10.67□□□□□ -0.7
CNTNAP3B-209ENST00000489789 OSCARQ8IYS5 282 aa10.67□□□□□ -0.7
CNTNAP3B-209ENST00000489789 CUX1P39880 1505 aa10.67□□□□□ -0.7
CNTNAP3B-209ENST00000489789 TDRD9Q8NDG6 1382 aaKnown RBP10.65□□□□□ -0.7
CNTNAP3B-209ENST00000489789 TRIM41Q8WV44 630 aa10.64□□□□□ -0.71
CNTNAP3B-209ENST00000489789 CHD1O14646 1710 aa10.64□□□□□ -0.71
CNTNAP3B-209ENST00000489789 SYNJ1O43426 1573 aa10.58□□□□□ -0.72
CNTNAP3B-209ENST00000489789 WRNQ14191 1432 aaPredicted RBP eCLIP10.58□□□□□ -0.72
CNTNAP3B-209ENST00000489789 PBRM1Q86U86 1689 aa10.57□□□□□ -0.72
CNTNAP3B-209ENST00000489789 WDR97A6NE52 1622 aa10.57□□□□□ -0.72
CNTNAP3B-209ENST00000489789 CHMP7Q8WUX9 453 aaPredicted RBP10.56□□□□□ -0.72
CNTNAP3B-209ENST00000489789 BIVM-ERCC5R4GMW8 1640 aa10.55□□□□□ -0.72
CNTNAP3B-209ENST00000489789 SNAPC4Q5SXM2 1469 aa10.55□□□□□ -0.72
CNTNAP3B-209ENST00000489789 TOP2BQ02880 1626 aa10.55□□□□□ -0.72
CNTNAP3B-209ENST00000489789 GAPVD1Q14C86 1478 aa10.53□□□□□ -0.72
CNTNAP3B-209ENST00000489789 GRIN2BQ13224 1484 aa10.52□□□□□ -0.73
CNTNAP3B-209ENST00000489789 RIMBP3CA6NJZ7 1639 aa10.51□□□□□ -0.73
CNTNAP3B-209ENST00000489789 RIMBP3BA6NNM3 1639 aa10.51□□□□□ -0.73
CNTNAP3B-209ENST00000489789 RIMBP3Q9UFD9 1639 aa10.51□□□□□ -0.73
CNTNAP3B-209ENST00000489789 ABCA10Q8WWZ4 1543 aa10.49□□□□□ -0.73
CNTNAP3B-209ENST00000489789 ABCA5Q8WWZ7 1642 aa10.49□□□□□ -0.73
CNTNAP3B-209ENST00000489789 MAGI1Q96QZ7 1491 aaPredicted RBP10.48□□□□□ -0.73
CNTNAP3B-209ENST00000489789 CYB5RLQ6IPT4 315 aa10.47□□□□□ -0.73
CNTNAP3B-209ENST00000489789 POTEDQ86YR6 584 aa10.46□□□□□ -0.73
CNTNAP3B-209ENST00000489789 SYNJ2O15056 1496 aa10.46□□□□□ -0.74
CNTNAP3B-209ENST00000489789 ARHGEF11O15085 1522 aa10.46□□□□□ -0.74
CNTNAP3B-209ENST00000489789 ADAMTS12P58397 1594 aa10.41□□□□□ -0.74
CNTNAP3B-209ENST00000489789 MAPK8IP2Q13387 824 aaPredicted RBP10.41□□□□□ -0.74
CNTNAP3B-209ENST00000489789 CLASP1Q7Z460 1538 aa10.39□□□□□ -0.75
CNTNAP3B-209ENST00000489789 GRIN2AQ12879 1464 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms