RNA–Protein interactions for RNA: ENST00000489606.5

PPM1M-209, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1M, humanhuman

TSL 2

Gene PPM1M, Length 2,285 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1M-209ENST00000489606 NISCHQ9Y2I1 1504 aa32.04■■■□□ 2.72
PPM1M-209ENST00000489606 CCDC180Q9P1Z9 1646 aa27.64■■■□□ 2.02
PPM1M-209ENST00000489606 ZCCHC6Q5VYS8 1495 aaKnown RBP27■■□□□ 1.91
PPM1M-209ENST00000489606 SHROOM4Q9ULL8 1493 aa26.64■■□□□ 1.86
PPM1M-209ENST00000489606 DCAF8L2P0C7V8 631 aa26.46■■□□□ 1.83
PPM1M-209ENST00000489606 DCAF1Q9Y4B6 1507 aa26.38■■□□□ 1.81
PPM1M-209ENST00000489606 ABCC9O60706 1549 aa25.95■■□□□ 1.75
PPM1M-209ENST00000489606 MYO15BQ96JP2 1530 aa25.86■■□□□ 1.73
PPM1M-209ENST00000489606 SUPT5HO00267 1087 aaKnown RBP25.79■■□□□ 1.72
PPM1M-209ENST00000489606 SCRIBQ14160 1630 aa25.66■■□□□ 1.7
PPM1M-209ENST00000489606 NACADO15069 1562 aa25.65■■□□□ 1.7
PPM1M-209ENST00000489606 RB1CC1Q8TDY2 1594 aa25.35■■□□□ 1.65
PPM1M-209ENST00000489606 RSF1Q96T23 1441 aaPredicted RBP25.07■■□□□ 1.6
PPM1M-209ENST00000489606 UNC13AQ9UPW8 1703 aa25.01■■□□□ 1.59
PPM1M-209ENST00000489606 CECR2Q9BXF3 1484 aa24.98■■□□□ 1.59
PPM1M-209ENST00000489606 CHIC1Q5VXU3 224 aa24.87■■□□□ 1.57
PPM1M-209ENST00000489606 MROH2BQ7Z745 1585 aa24.85■■□□□ 1.57
PPM1M-209ENST00000489606 BICRAQ9NZM4 1560 aa24.71■■□□□ 1.55
PPM1M-209ENST00000489606 WIZO95785 1651 aa24.69■■□□□ 1.54
PPM1M-209ENST00000489606 BAZ1AQ9NRL2 1556 aaPredicted RBP24.66■■□□□ 1.54
PPM1M-209ENST00000489606 PABPN1Q86U42 306 aaKnown RBP eCLIP24.61■■□□□ 1.53
PPM1M-209ENST00000489606 SMARCA4P51532 1647 aa24.55■■□□□ 1.52
PPM1M-209ENST00000489606 TOP2AP11388 1531 aaKnown RBP24.33■■□□□ 1.49
PPM1M-209ENST00000489606 SMARCA2P51531 1590 aa24.17■■□□□ 1.46
PPM1M-209ENST00000489606 EIF4G1Q04637 1599 aaKnown RBP24.17■■□□□ 1.46
PPM1M-209ENST00000489606 PEG3Q9GZU2 1588 aa24.17■■□□□ 1.46
PPM1M-209ENST00000489606 CCDC88BA6NC98 1476 aa24.16■■□□□ 1.46
PPM1M-209ENST00000489606 TRIM41Q8WV44 630 aa24.12■■□□□ 1.45
PPM1M-209ENST00000489606 ATAD2BQ9ULI0 1458 aa24.04■■□□□ 1.44
PPM1M-209ENST00000489606 LOC105371045A0A1W2PR82 267 aa24.04■■□□□ 1.44
PPM1M-209ENST00000489606 BAZ1BQ9UIG0 1483 aaKnown RBP23.91■■□□□ 1.42
PPM1M-209ENST00000489606 ABCC8Q09428 1581 aa23.86■■□□□ 1.41
PPM1M-209ENST00000489606 FAM9AQ8IZU1 332 aaPredicted RBP23.83■■□□□ 1.41
PPM1M-209ENST00000489606 NCAPD3P42695 1498 aa23.71■■□□□ 1.39
PPM1M-209ENST00000489606 HMGXB3Q12766 1538 aa23.69■■□□□ 1.38
PPM1M-209ENST00000489606 EHMT2Q96KQ7 1210 aa23.57■■□□□ 1.36
PPM1M-209ENST00000489606 WRNQ14191 1432 aaPredicted RBP eCLIP23.54■■□□□ 1.36
PPM1M-209ENST00000489606 SYNJ1O43426 1573 aa23.51■■□□□ 1.35
PPM1M-209ENST00000489606 SOGA1O94964 1423 aa23.49■■□□□ 1.35
PPM1M-209ENST00000489606 CC2D2AQ9P2K1 1620 aa23.45■■□□□ 1.34
PPM1M-209ENST00000489606 RUSC2Q8N2Y8 1516 aa23.42■■□□□ 1.34
PPM1M-209ENST00000489606 PCGF6Q9BYE7 350 aa23.34■■□□□ 1.33
PPM1M-209ENST00000489606 CFTRP13569 1480 aa23.33■■□□□ 1.33
PPM1M-209ENST00000489606 EEA1Q15075 1411 aa23.31■■□□□ 1.32
PPM1M-209ENST00000489606 TOP2BQ02880 1626 aa23.29■■□□□ 1.32
PPM1M-209ENST00000489606 CSRNP3Q8WYN3 585 aa23.26■■□□□ 1.31
PPM1M-209ENST00000489606 BIVM-ERCC5R4GMW8 1640 aa23.26■■□□□ 1.31
PPM1M-209ENST00000489606 PRDM2Q13029 1718 aa23.21■■□□□ 1.31
PPM1M-209ENST00000489606 CUX1P39880 1505 aa23.19■■□□□ 1.3
PPM1M-209ENST00000489606 CADPSQ9ULU8 1353 aa23.16■■□□□ 1.3
PPM1M-209ENST00000489606 TNIKQ9UKE5 1360 aa23.12■■□□□ 1.29
PPM1M-209ENST00000489606 TRIM26Q12899 539 aaPredicted RBP23.11■■□□□ 1.29
PPM1M-209ENST00000489606 GOLGA3Q08378 1498 aa23.1■■□□□ 1.29
PPM1M-209ENST00000489606 CEP162Q5TB80 1403 aa23.08■■□□□ 1.29
PPM1M-209ENST00000489606 KIF21BO75037 1637 aa23.08■■□□□ 1.28
PPM1M-209ENST00000489606 CEP164Q9UPV0 1460 aa23.05■■□□□ 1.28
PPM1M-209ENST00000489606 UBTFP17480 764 aaKnown RBP23.04■■□□□ 1.28
PPM1M-209ENST00000489606 RAPGEF2Q9Y4G8 1499 aa22.97■■□□□ 1.27
PPM1M-209ENST00000489606 NESP48681 1621 aa22.96■■□□□ 1.27
PPM1M-209ENST00000489606 HRCP23327 699 aa22.96■■□□□ 1.27
PPM1M-209ENST00000489606 DNAJC5BQ9UF47 199 aa22.94■■□□□ 1.26
PPM1M-209ENST00000489606 FANCD2Q9BXW9 1451 aa22.93■■□□□ 1.26
PPM1M-209ENST00000489606 PPARGC1BQ86YN6 1023 aaKnown RBP22.93■■□□□ 1.26
PPM1M-209ENST00000489606 KIF27Q86VH2 1401 aa22.87■■□□□ 1.25
PPM1M-209ENST00000489606 PRXQ9BXM0 1461 aa22.87■■□□□ 1.25
PPM1M-209ENST00000489606 FGD5Q6ZNL6 1462 aa22.85■■□□□ 1.25
PPM1M-209ENST00000489606 ERICH3Q5RHP9 1530 aa22.81■■□□□ 1.24
PPM1M-209ENST00000489606 LAMC3Q9Y6N6 1575 aa22.81■■□□□ 1.24
PPM1M-209ENST00000489606 CLIP1P30622 1438 aa22.78■■□□□ 1.24
PPM1M-209ENST00000489606 CUX2O14529 1486 aa22.78■■□□□ 1.24
PPM1M-209ENST00000489606 DNMBPQ6XZF7 1577 aa22.77■■□□□ 1.24
PPM1M-209ENST00000489606 TOPBP1Q92547 1522 aa22.74■■□□□ 1.23
PPM1M-209ENST00000489606 IGF1RP08069 1367 aa22.69■■□□□ 1.22
PPM1M-209ENST00000489606 RANGAP1P46060 587 aaPredicted RBP22.68■■□□□ 1.22
PPM1M-209ENST00000489606 POLA1P09884 1462 aaPredicted RBP22.68■■□□□ 1.22
PPM1M-209ENST00000489606 RAD54L2Q9Y4B4 1467 aa22.67■■□□□ 1.22
PPM1M-209ENST00000489606 URB2Q14146 1524 aaKnown RBP22.67■■□□□ 1.22
PPM1M-209ENST00000489606 TTBK1Q5TCY1 1321 aaPredicted RBP22.66■■□□□ 1.22
PPM1M-209ENST00000489606 KIF21AQ7Z4S6 1674 aa22.64■■□□□ 1.21
PPM1M-209ENST00000489606 VPS8Q8N3P4 1428 aa22.63■■□□□ 1.21
PPM1M-209ENST00000489606 PDS5BQ9NTI5 1447 aa22.62■■□□□ 1.21
PPM1M-209ENST00000489606 ABCA10Q8WWZ4 1543 aa22.6■■□□□ 1.21
PPM1M-209ENST00000489606 CARMIL1Q5VZK9 1371 aa22.56■■□□□ 1.2
PPM1M-209ENST00000489606 ARAP1Q96P48 1450 aa22.56■■□□□ 1.2
PPM1M-209ENST00000489606 WDR97A6NE52 1622 aa22.53■■□□□ 1.2
PPM1M-209ENST00000489606 ARHGAP35Q9NRY4 1499 aa22.46■■□□□ 1.19
PPM1M-209ENST00000489606 ABCA5Q8WWZ7 1642 aa22.41■■□□□ 1.18
PPM1M-209ENST00000489606 TDRD9Q8NDG6 1382 aaKnown RBP22.4■■□□□ 1.18
PPM1M-209ENST00000489606 CUL7Q14999 1698 aa22.39■■□□□ 1.18
PPM1M-209ENST00000489606 TARBP1Q13395 1621 aaKnown RBP22.37■■□□□ 1.17
PPM1M-209ENST00000489606 APLP2Q06481 763 aa22.36■■□□□ 1.17
PPM1M-209ENST00000489606 MRC2Q9UBG0 1479 aa22.34■■□□□ 1.17
PPM1M-209ENST00000489606 GAPVD1Q14C86 1478 aa22.34■■□□□ 1.17
PPM1M-209ENST00000489606 ZEB1P37275 1124 aaPredicted RBP22.29■■□□□ 1.16
PPM1M-209ENST00000489606 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.28■■□□□ 1.16
PPM1M-209ENST00000489606 KANK4Q5T7N3 995 aaPredicted RBP22.26■■□□□ 1.15
PPM1M-209ENST00000489606 CTTNBP2Q8WZ74 1663 aa22.26■■□□□ 1.15
PPM1M-209ENST00000489606 WDR62O43379 1518 aa22.21■■□□□ 1.15
PPM1M-209ENST00000489606 PBRM1Q86U86 1689 aa22.2■■□□□ 1.15
PPM1M-209ENST00000489606 AQRO60306 1485 aaKnown RBP eCLIP22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms