RNA–Protein interactions for RNA: ENST00000489551.5

CSF3R-213, Transcript of colony stimulating factor 3 receptor, humanhuman

TSL 1 (best)

Gene CSF3R, Length 787 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF3R-213ENST00000489551 NISCHQ9Y2I1 1504 aa25.61■■□□□ 1.69
CSF3R-213ENST00000489551 ABCC9O60706 1549 aa23.08■■□□□ 1.28
CSF3R-213ENST00000489551 CCDC180Q9P1Z9 1646 aa23.02■■□□□ 1.28
CSF3R-213ENST00000489551 RB1CC1Q8TDY2 1594 aa21.9■■□□□ 1.1
CSF3R-213ENST00000489551 DNAJC5BQ9UF47 199 aa21.79■■□□□ 1.08
CSF3R-213ENST00000489551 NACADO15069 1562 aa21.73■■□□□ 1.07
CSF3R-213ENST00000489551 UNC13AQ9UPW8 1703 aa21.59■■□□□ 1.05
CSF3R-213ENST00000489551 DCAF8L2P0C7V8 631 aa21.56■■□□□ 1.04
CSF3R-213ENST00000489551 PABPN1Q86U42 306 aaKnown RBP eCLIP21.46■■□□□ 1.03
CSF3R-213ENST00000489551 MYO15BQ96JP2 1530 aa21.41■■□□□ 1.02
CSF3R-213ENST00000489551 BICRAQ9NZM4 1560 aa21.38■■□□□ 1.01
CSF3R-213ENST00000489551 ZCCHC6Q5VYS8 1495 aaKnown RBP21.2■□□□□ 0.98
CSF3R-213ENST00000489551 DCAF1Q9Y4B6 1507 aa21.12■□□□□ 0.97
CSF3R-213ENST00000489551 SCRIBQ14160 1630 aa20.98■□□□□ 0.95
CSF3R-213ENST00000489551 SHROOM4Q9ULL8 1493 aa20.93■□□□□ 0.94
CSF3R-213ENST00000489551 CC2D2AQ9P2K1 1620 aa20.87■□□□□ 0.93
CSF3R-213ENST00000489551 EIF4G1Q04637 1599 aaKnown RBP20.8■□□□□ 0.92
CSF3R-213ENST00000489551 CECR2Q9BXF3 1484 aa20.76■□□□□ 0.91
CSF3R-213ENST00000489551 NCAPD3P42695 1498 aa20.07■□□□□ 0.8
CSF3R-213ENST00000489551 ATAD2BQ9ULI0 1458 aa20.02■□□□□ 0.8
CSF3R-213ENST00000489551 SMARCA4P51532 1647 aa20.01■□□□□ 0.79
CSF3R-213ENST00000489551 DNAJC5Q9H3Z4 198 aa19.96■□□□□ 0.79
CSF3R-213ENST00000489551 HMGXB3Q12766 1538 aa19.92■□□□□ 0.78
CSF3R-213ENST00000489551 SMARCA2P51531 1590 aa19.91■□□□□ 0.78
CSF3R-213ENST00000489551 CUX2O14529 1486 aa19.86■□□□□ 0.77
CSF3R-213ENST00000489551 NESP48681 1621 aa19.85■□□□□ 0.77
CSF3R-213ENST00000489551 ERCC6Q03468 1493 aa19.85■□□□□ 0.77
CSF3R-213ENST00000489551 BAZ1AQ9NRL2 1556 aaPredicted RBP19.84■□□□□ 0.77
CSF3R-213ENST00000489551 PEG3Q9GZU2 1588 aa19.81■□□□□ 0.76
CSF3R-213ENST00000489551 BAZ1BQ9UIG0 1483 aaKnown RBP19.79■□□□□ 0.76
CSF3R-213ENST00000489551 MROH2BQ7Z745 1585 aa19.77■□□□□ 0.76
CSF3R-213ENST00000489551 THOC2Q8NI27 1593 aaKnown RBP19.66■□□□□ 0.74
CSF3R-213ENST00000489551 KIF21AQ7Z4S6 1674 aa19.63■□□□□ 0.73
CSF3R-213ENST00000489551 LAMC3Q9Y6N6 1575 aa19.63■□□□□ 0.73
CSF3R-213ENST00000489551 WIZO95785 1651 aa19.56■□□□□ 0.72
CSF3R-213ENST00000489551 PDS5BQ9NTI5 1447 aa19.46■□□□□ 0.71
CSF3R-213ENST00000489551 CADPSQ9ULU8 1353 aa19.44■□□□□ 0.7
CSF3R-213ENST00000489551 MRC2Q9UBG0 1479 aa19.34■□□□□ 0.69
CSF3R-213ENST00000489551 WDR62O43379 1518 aa19.33■□□□□ 0.68
CSF3R-213ENST00000489551 RSF1Q96T23 1441 aaPredicted RBP19.29■□□□□ 0.68
CSF3R-213ENST00000489551 CFTRP13569 1480 aa19.23■□□□□ 0.67
CSF3R-213ENST00000489551 FANCD2Q9BXW9 1451 aa19.23■□□□□ 0.67
CSF3R-213ENST00000489551 CEP164Q9UPV0 1460 aa19.23■□□□□ 0.67
CSF3R-213ENST00000489551 TOP2AP11388 1531 aaKnown RBP19.23■□□□□ 0.67
CSF3R-213ENST00000489551 URB2Q14146 1524 aaKnown RBP19.13■□□□□ 0.65
CSF3R-213ENST00000489551 PRDM2Q13029 1718 aa19.12■□□□□ 0.65
CSF3R-213ENST00000489551 CCDC88BA6NC98 1476 aa19.03■□□□□ 0.64
CSF3R-213ENST00000489551 TRIM41Q8WV44 630 aa19.02■□□□□ 0.64
CSF3R-213ENST00000489551 OSCARQ8IYS5 282 aa18.93■□□□□ 0.62
CSF3R-213ENST00000489551 ZNF608Q9ULD9 1512 aaPredicted RBP18.91■□□□□ 0.62
CSF3R-213ENST00000489551 TOPBP1Q92547 1522 aa18.89■□□□□ 0.61
CSF3R-213ENST00000489551 IFT140Q96RY7 1462 aa18.85■□□□□ 0.61
CSF3R-213ENST00000489551 DNMBPQ6XZF7 1577 aa18.81■□□□□ 0.6
CSF3R-213ENST00000489551 RIMBP3CA6NJZ7 1639 aa18.8■□□□□ 0.6
CSF3R-213ENST00000489551 RIMBP3BA6NNM3 1639 aa18.8■□□□□ 0.6
CSF3R-213ENST00000489551 RIMBP3Q9UFD9 1639 aa18.8■□□□□ 0.6
CSF3R-213ENST00000489551 EIF4G3O43432 1585 aaKnown RBP18.8■□□□□ 0.6
CSF3R-213ENST00000489551 TARBP1Q13395 1621 aaKnown RBP18.78■□□□□ 0.6
CSF3R-213ENST00000489551 ABCC8Q09428 1581 aa18.76■□□□□ 0.59
CSF3R-213ENST00000489551 CHD1O14646 1710 aa18.72■□□□□ 0.59
CSF3R-213ENST00000489551 AQRO60306 1485 aaKnown RBP eCLIP18.71■□□□□ 0.593e-11■■■■■ 51.4
CSF3R-213ENST00000489551 POLA1P09884 1462 aaPredicted RBP18.69■□□□□ 0.58
CSF3R-213ENST00000489551 ARHGEF11O15085 1522 aa18.69■□□□□ 0.58
CSF3R-213ENST00000489551 RAD54L2Q9Y4B4 1467 aa18.65■□□□□ 0.58
CSF3R-213ENST00000489551 SOGA1O94964 1423 aa18.57■□□□□ 0.56
CSF3R-213ENST00000489551 CUX1P39880 1505 aa18.56■□□□□ 0.56
CSF3R-213ENST00000489551 FGD5Q6ZNL6 1462 aa18.56■□□□□ 0.56
CSF3R-213ENST00000489551 TDRD9Q8NDG6 1382 aaKnown RBP18.55■□□□□ 0.56
CSF3R-213ENST00000489551 FBLN2P98095 1184 aa18.52■□□□□ 0.56
CSF3R-213ENST00000489551 ARAP1Q96P48 1450 aa18.52■□□□□ 0.55
CSF3R-213ENST00000489551 CYB5RLQ6IPT4 315 aa18.51■□□□□ 0.55
CSF3R-213ENST00000489551 WDR97A6NE52 1622 aa18.5■□□□□ 0.55
CSF3R-213ENST00000489551 SNAPC4Q5SXM2 1469 aa18.49■□□□□ 0.55
CSF3R-213ENST00000489551 CLASP1Q7Z460 1538 aa18.46■□□□□ 0.55
CSF3R-213ENST00000489551 PBRM1Q86U86 1689 aa18.43■□□□□ 0.54
CSF3R-213ENST00000489551 MAGI1Q96QZ7 1491 aaPredicted RBP18.41■□□□□ 0.54
CSF3R-213ENST00000489551 GRIN2BQ13224 1484 aa18.4■□□□□ 0.54
CSF3R-213ENST00000489551 SYNJ1O43426 1573 aa18.38■□□□□ 0.53
CSF3R-213ENST00000489551 SYNJ2O15056 1496 aa18.36■□□□□ 0.53
CSF3R-213ENST00000489551 CHMP7Q8WUX9 453 aaPredicted RBP18.36■□□□□ 0.53
CSF3R-213ENST00000489551 ABCA5Q8WWZ7 1642 aa18.36■□□□□ 0.53
CSF3R-213ENST00000489551 GAPVD1Q14C86 1478 aa18.34■□□□□ 0.53
CSF3R-213ENST00000489551 SUPT5HO00267 1087 aaKnown RBP18.34■□□□□ 0.53
CSF3R-213ENST00000489551 ABCA10Q8WWZ4 1543 aa18.33■□□□□ 0.53
CSF3R-213ENST00000489551 TRHP20396 242 aaPredicted RBP18.28■□□□□ 0.52
CSF3R-213ENST00000489551 BIVM-ERCC5R4GMW8 1640 aa18.26■□□□□ 0.51
CSF3R-213ENST00000489551 TOP2BQ02880 1626 aa18.23■□□□□ 0.51
CSF3R-213ENST00000489551 ERCC6L2Q5T890 1561 aa18.22■□□□□ 0.51
CSF3R-213ENST00000489551 ADAMTS12P58397 1594 aa18.2■□□□□ 0.5
CSF3R-213ENST00000489551 WRNQ14191 1432 aaPredicted RBP eCLIP18.19■□□□□ 0.5
CSF3R-213ENST00000489551 CEP170Q5SW79 1584 aa18.19■□□□□ 0.5
CSF3R-213ENST00000489551 GRIN2AQ12879 1464 aa18.19■□□□□ 0.5
CSF3R-213ENST00000489551 NUP160Q12769 1436 aa18.15■□□□□ 0.5
CSF3R-213ENST00000489551 SHROOM2Q13796 1616 aa18.12■□□□□ 0.49
CSF3R-213ENST00000489551 ERICH3Q5RHP9 1530 aa18.09■□□□□ 0.49
CSF3R-213ENST00000489551 FHAD1B1AJZ9 1412 aa18.09■□□□□ 0.49
CSF3R-213ENST00000489551 KIF13AQ9H1H9 1805 aa17.98■□□□□ 0.47
CSF3R-213ENST00000489551 RUSC2Q8N2Y8 1516 aa17.96■□□□□ 0.47
CSF3R-213ENST00000489551 PRG4Q92954 1404 aaPredicted RBP17.96■□□□□ 0.47
CSF3R-213ENST00000489551 JPH4Q96JJ6 628 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms