RNA–Protein interactions for RNA: ENST00000489549.5

GABPB2-206, Transcript of GA binding protein transcription factor subunit beta 2, humanhuman

TSL 3

Gene GABPB2, Length 915 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB2-206ENST00000489549 NISCHQ9Y2I1 1504 aa35.01■■■■□ 3.19
GABPB2-206ENST00000489549 CCDC180Q9P1Z9 1646 aa31.24■■■□□ 2.59
GABPB2-206ENST00000489549 ABCC9O60706 1549 aa30.53■■■□□ 2.48
GABPB2-206ENST00000489549 RB1CC1Q8TDY2 1594 aa29.42■■■□□ 2.3
GABPB2-206ENST00000489549 NACADO15069 1562 aa29.39■■■□□ 2.29
GABPB2-206ENST00000489549 MYO15BQ96JP2 1530 aa29.25■■■□□ 2.27
GABPB2-206ENST00000489549 ZCCHC6Q5VYS8 1495 aaKnown RBP29.16■■■□□ 2.26
GABPB2-206ENST00000489549 DCAF1Q9Y4B6 1507 aa29.06■■■□□ 2.24
GABPB2-206ENST00000489549 DCAF8L2P0C7V8 631 aa29.03■■■□□ 2.24
GABPB2-206ENST00000489549 UNC13AQ9UPW8 1703 aa28.74■■■□□ 2.19
GABPB2-206ENST00000489549 BICRAQ9NZM4 1560 aa28.56■■■□□ 2.16
GABPB2-206ENST00000489549 PABPN1Q86U42 306 aaKnown RBP eCLIP28.45■■■□□ 2.14
GABPB2-206ENST00000489549 SCRIBQ14160 1630 aa28.36■■■□□ 2.13
GABPB2-206ENST00000489549 SHROOM4Q9ULL8 1493 aa28.34■■■□□ 2.13
GABPB2-206ENST00000489549 DNAJC5BQ9UF47 199 aa28.16■■■□□ 2.1
GABPB2-206ENST00000489549 EIF4G1Q04637 1599 aaKnown RBP27.79■■■□□ 2.04
GABPB2-206ENST00000489549 CC2D2AQ9P2K1 1620 aa27.68■■■□□ 2.02
GABPB2-206ENST00000489549 CECR2Q9BXF3 1484 aa27.5■■□□□ 1.99
GABPB2-206ENST00000489549 SMARCA4P51532 1647 aa27.19■■□□□ 1.94
GABPB2-206ENST00000489549 BAZ1AQ9NRL2 1556 aaPredicted RBP27.15■■□□□ 1.94
GABPB2-206ENST00000489549 NCAPD3P42695 1498 aa27.12■■□□□ 1.93
GABPB2-206ENST00000489549 ATAD2BQ9ULI0 1458 aa27.07■■□□□ 1.92
GABPB2-206ENST00000489549 SMARCA2P51531 1590 aa27.05■■□□□ 1.92
GABPB2-206ENST00000489549 PEG3Q9GZU2 1588 aa27.01■■□□□ 1.92
GABPB2-206ENST00000489549 HMGXB3Q12766 1538 aa26.99■■□□□ 1.91
GABPB2-206ENST00000489549 MROH2BQ7Z745 1585 aa26.94■■□□□ 1.9
GABPB2-206ENST00000489549 BAZ1BQ9UIG0 1483 aaKnown RBP26.81■■□□□ 1.88
GABPB2-206ENST00000489549 WIZO95785 1651 aa26.63■■□□□ 1.85
GABPB2-206ENST00000489549 RSF1Q96T23 1441 aaPredicted RBP26.59■■□□□ 1.85
GABPB2-206ENST00000489549 LAMC3Q9Y6N6 1575 aa26.41■■□□□ 1.82
GABPB2-206ENST00000489549 NESP48681 1621 aa26.4■■□□□ 1.82
GABPB2-206ENST00000489549 TOP2AP11388 1531 aaKnown RBP26.39■■□□□ 1.81
GABPB2-206ENST00000489549 ERCC6Q03468 1493 aa26.32■■□□□ 1.8
GABPB2-206ENST00000489549 CADPSQ9ULU8 1353 aa26.26■■□□□ 1.79
GABPB2-206ENST00000489549 CUX2O14529 1486 aa26.22■■□□□ 1.79
GABPB2-206ENST00000489549 PDS5BQ9NTI5 1447 aa26.19■■□□□ 1.78
GABPB2-206ENST00000489549 KIF21AQ7Z4S6 1674 aa26.12■■□□□ 1.77
GABPB2-206ENST00000489549 THOC2Q8NI27 1593 aaKnown RBP26.12■■□□□ 1.77
GABPB2-206ENST00000489549 CFTRP13569 1480 aa26.12■■□□□ 1.77
GABPB2-206ENST00000489549 CCDC88BA6NC98 1476 aa26.04■■□□□ 1.76
GABPB2-206ENST00000489549 FANCD2Q9BXW9 1451 aa25.94■■□□□ 1.74
GABPB2-206ENST00000489549 MRC2Q9UBG0 1479 aa25.94■■□□□ 1.74
GABPB2-206ENST00000489549 CEP164Q9UPV0 1460 aa25.93■■□□□ 1.74
GABPB2-206ENST00000489549 PRDM2Q13029 1718 aa25.92■■□□□ 1.74
GABPB2-206ENST00000489549 WDR62O43379 1518 aa25.91■■□□□ 1.74
GABPB2-206ENST00000489549 URB2Q14146 1524 aaKnown RBP25.72■■□□□ 1.71
GABPB2-206ENST00000489549 SUPT5HO00267 1087 aaKnown RBP25.62■■□□□ 1.69
GABPB2-206ENST00000489549 ABCC8Q09428 1581 aa25.56■■□□□ 1.68
GABPB2-206ENST00000489549 TOPBP1Q92547 1522 aa25.53■■□□□ 1.68
GABPB2-206ENST00000489549 DNMBPQ6XZF7 1577 aa25.52■■□□□ 1.68
GABPB2-206ENST00000489549 DNAJC5Q9H3Z4 198 aa25.5■■□□□ 1.67
GABPB2-206ENST00000489549 IFT140Q96RY7 1462 aa25.42■■□□□ 1.66
GABPB2-206ENST00000489549 POLA1P09884 1462 aaPredicted RBP25.31■■□□□ 1.64
GABPB2-206ENST00000489549 TARBP1Q13395 1621 aaKnown RBP25.3■■□□□ 1.64
GABPB2-206ENST00000489549 CUX1P39880 1505 aa25.28■■□□□ 1.64
GABPB2-206ENST00000489549 ZNF608Q9ULD9 1512 aaPredicted RBP25.27■■□□□ 1.64
GABPB2-206ENST00000489549 FGD5Q6ZNL6 1462 aa25.21■■□□□ 1.63
GABPB2-206ENST00000489549 EIF4G3O43432 1585 aaKnown RBP25.2■■□□□ 1.62
GABPB2-206ENST00000489549 WDR97A6NE52 1622 aa25.17■■□□□ 1.62
GABPB2-206ENST00000489549 SOGA1O94964 1423 aa25.16■■□□□ 1.62
GABPB2-206ENST00000489549 RAD54L2Q9Y4B4 1467 aa25.15■■□□□ 1.62
GABPB2-206ENST00000489549 AQRO60306 1485 aaKnown RBP eCLIP25.09■■□□□ 1.61
GABPB2-206ENST00000489549 BIVM-ERCC5R4GMW8 1640 aa25.08■■□□□ 1.61
GABPB2-206ENST00000489549 TOP2BQ02880 1626 aa25.07■■□□□ 1.6
GABPB2-206ENST00000489549 WRNQ14191 1432 aaPredicted RBP eCLIP25.05■■□□□ 1.6
GABPB2-206ENST00000489549 SYNJ1O43426 1573 aa25.01■■□□□ 1.59
GABPB2-206ENST00000489549 ABCA10Q8WWZ4 1543 aa25.01■■□□□ 1.59
GABPB2-206ENST00000489549 OSCARQ8IYS5 282 aa25■■□□□ 1.59
GABPB2-206ENST00000489549 TDRD9Q8NDG6 1382 aaKnown RBP25■■□□□ 1.59
GABPB2-206ENST00000489549 ABCA5Q8WWZ7 1642 aa24.94■■□□□ 1.58
GABPB2-206ENST00000489549 GRIN2BQ13224 1484 aa24.92■■□□□ 1.58
GABPB2-206ENST00000489549 MAGI1Q96QZ7 1491 aaPredicted RBP24.9■■□□□ 1.58
GABPB2-206ENST00000489549 CHD1O14646 1710 aa24.89■■□□□ 1.57
GABPB2-206ENST00000489549 GAPVD1Q14C86 1478 aa24.89■■□□□ 1.57
GABPB2-206ENST00000489549 SNAPC4Q5SXM2 1469 aa24.88■■□□□ 1.57
GABPB2-206ENST00000489549 PBRM1Q86U86 1689 aa24.86■■□□□ 1.57
GABPB2-206ENST00000489549 SYNJ2O15056 1496 aa24.79■■□□□ 1.56
GABPB2-206ENST00000489549 ERICH3Q5RHP9 1530 aa24.71■■□□□ 1.55
GABPB2-206ENST00000489549 FBLN2P98095 1184 aa24.69■■□□□ 1.54
GABPB2-206ENST00000489549 ADAMTS12P58397 1594 aa24.68■■□□□ 1.54
GABPB2-206ENST00000489549 CLASP1Q7Z460 1538 aa24.68■■□□□ 1.54
GABPB2-206ENST00000489549 CHMP7Q8WUX9 453 aaPredicted RBP24.68■■□□□ 1.54
GABPB2-206ENST00000489549 RIMBP3CA6NJZ7 1639 aa24.66■■□□□ 1.54
GABPB2-206ENST00000489549 RIMBP3BA6NNM3 1639 aa24.66■■□□□ 1.54
GABPB2-206ENST00000489549 RIMBP3Q9UFD9 1639 aa24.66■■□□□ 1.54
GABPB2-206ENST00000489549 ARHGEF11O15085 1522 aa24.65■■□□□ 1.54
GABPB2-206ENST00000489549 FHAD1B1AJZ9 1412 aa24.61■■□□□ 1.53
GABPB2-206ENST00000489549 GRIN2AQ12879 1464 aa24.6■■□□□ 1.53
GABPB2-206ENST00000489549 NUP160Q12769 1436 aa24.54■■□□□ 1.52
GABPB2-206ENST00000489549 KIF27Q86VH2 1401 aa24.54■■□□□ 1.52
GABPB2-206ENST00000489549 CEP170Q5SW79 1584 aa24.49■■□□□ 1.51
GABPB2-206ENST00000489549 IGF1RP08069 1367 aa24.47■■□□□ 1.51
GABPB2-206ENST00000489549 CUL7Q14999 1698 aa24.46■■□□□ 1.51
GABPB2-206ENST00000489549 ARAP1Q96P48 1450 aa24.45■■□□□ 1.5
GABPB2-206ENST00000489549 TRIM41Q8WV44 630 aa24.44■■□□□ 1.5
GABPB2-206ENST00000489549 SHROOM2Q13796 1616 aa24.39■■□□□ 1.5
GABPB2-206ENST00000489549 RUSC2Q8N2Y8 1516 aa24.33■■□□□ 1.49
GABPB2-206ENST00000489549 CYB5RLQ6IPT4 315 aa24.31■■□□□ 1.48
GABPB2-206ENST00000489549 CARMIL1Q5VZK9 1371 aa24.29■■□□□ 1.48
GABPB2-206ENST00000489549 ERCC6L2Q5T890 1561 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms