RNA–Protein interactions for RNA: ENST00000489548.1

PHACTR1-210, Transcript of phosphatase and actin regulator 1, humanhuman

TSL 5

Gene PHACTR1, Length 568 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1-210ENST00000489548 NISCHQ9Y2I1 1504 aa22.82■■□□□ 1.24
PHACTR1-210ENST00000489548 ABCC9O60706 1549 aa20.85■□□□□ 0.93
PHACTR1-210ENST00000489548 CCDC180Q9P1Z9 1646 aa20.53■□□□□ 0.88
PHACTR1-210ENST00000489548 DNAJC5BQ9UF47 199 aa19.87■□□□□ 0.77
PHACTR1-210ENST00000489548 RB1CC1Q8TDY2 1594 aa19.7■□□□□ 0.74
PHACTR1-210ENST00000489548 NACADO15069 1562 aa19.52■□□□□ 0.71
PHACTR1-210ENST00000489548 DCAF8L2P0C7V8 631 aa19.46■□□□□ 0.71
PHACTR1-210ENST00000489548 PABPN1Q86U42 306 aaKnown RBP eCLIP19.43■□□□□ 0.7
PHACTR1-210ENST00000489548 UNC13AQ9UPW8 1703 aa19.22■□□□□ 0.67
PHACTR1-210ENST00000489548 MYO15BQ96JP2 1530 aa19.17■□□□□ 0.66
PHACTR1-210ENST00000489548 BICRAQ9NZM4 1560 aa19.15■□□□□ 0.66
PHACTR1-210ENST00000489548 ZCCHC6Q5VYS8 1495 aaKnown RBP18.84■□□□□ 0.61
PHACTR1-210ENST00000489548 SHROOM4Q9ULL8 1493 aa18.84■□□□□ 0.61
PHACTR1-210ENST00000489548 DCAF1Q9Y4B6 1507 aa18.82■□□□□ 0.6
PHACTR1-210ENST00000489548 CECR2Q9BXF3 1484 aa18.81■□□□□ 0.6
PHACTR1-210ENST00000489548 CC2D2AQ9P2K1 1620 aa18.8■□□□□ 0.6
PHACTR1-210ENST00000489548 SCRIBQ14160 1630 aa18.71■□□□□ 0.59
PHACTR1-210ENST00000489548 EIF4G1Q04637 1599 aaKnown RBP18.69■□□□□ 0.58
PHACTR1-210ENST00000489548 DNAJC5Q9H3Z4 198 aa18.42■□□□□ 0.54
PHACTR1-210ENST00000489548 CUX2O14529 1486 aa18.07■□□□□ 0.48
PHACTR1-210ENST00000489548 NCAPD3P42695 1498 aa18.06■□□□□ 0.48
PHACTR1-210ENST00000489548 ERCC6Q03468 1493 aa18.01■□□□□ 0.47
PHACTR1-210ENST00000489548 ATAD2BQ9ULI0 1458 aa17.95■□□□□ 0.46
PHACTR1-210ENST00000489548 SMARCA2P51531 1590 aa17.86■□□□□ 0.45
PHACTR1-210ENST00000489548 HMGXB3Q12766 1538 aa17.85■□□□□ 0.45
PHACTR1-210ENST00000489548 NESP48681 1621 aa17.84■□□□□ 0.45
PHACTR1-210ENST00000489548 SMARCA4P51532 1647 aa17.83■□□□□ 0.45
PHACTR1-210ENST00000489548 BAZ1BQ9UIG0 1483 aaKnown RBP17.75■□□□□ 0.43
PHACTR1-210ENST00000489548 BAZ1AQ9NRL2 1556 aaPredicted RBP17.71■□□□□ 0.43
PHACTR1-210ENST00000489548 PEG3Q9GZU2 1588 aa17.66■□□□□ 0.42
PHACTR1-210ENST00000489548 THOC2Q8NI27 1593 aaKnown RBP17.66■□□□□ 0.42
PHACTR1-210ENST00000489548 LAMC3Q9Y6N6 1575 aa17.65■□□□□ 0.42
PHACTR1-210ENST00000489548 MROH2BQ7Z745 1585 aa17.59■□□□□ 0.41
PHACTR1-210ENST00000489548 PDS5BQ9NTI5 1447 aa17.59■□□□□ 0.41
PHACTR1-210ENST00000489548 KIF21AQ7Z4S6 1674 aa17.54■□□□□ 0.4
PHACTR1-210ENST00000489548 CADPSQ9ULU8 1353 aa17.51■□□□□ 0.39
PHACTR1-210ENST00000489548 TRIM41Q8WV44 630 aa17.49■□□□□ 0.39
PHACTR1-210ENST00000489548 MRC2Q9UBG0 1479 aa17.43■□□□□ 0.38
PHACTR1-210ENST00000489548 WDR62O43379 1518 aa17.38■□□□□ 0.37
PHACTR1-210ENST00000489548 WIZO95785 1651 aa17.34■□□□□ 0.37
PHACTR1-210ENST00000489548 CEP164Q9UPV0 1460 aa17.31■□□□□ 0.36
PHACTR1-210ENST00000489548 FANCD2Q9BXW9 1451 aa17.28■□□□□ 0.36
PHACTR1-210ENST00000489548 OSCARQ8IYS5 282 aa17.27■□□□□ 0.36
PHACTR1-210ENST00000489548 CFTRP13569 1480 aa17.23■□□□□ 0.35
PHACTR1-210ENST00000489548 URB2Q14146 1524 aaKnown RBP17.16■□□□□ 0.34
PHACTR1-210ENST00000489548 RSF1Q96T23 1441 aaPredicted RBP17.15■□□□□ 0.34
PHACTR1-210ENST00000489548 TOP2AP11388 1531 aaKnown RBP17.1■□□□□ 0.33
PHACTR1-210ENST00000489548 ZNF608Q9ULD9 1512 aaPredicted RBP17■□□□□ 0.31
PHACTR1-210ENST00000489548 RIMBP3CA6NJZ7 1639 aa16.99■□□□□ 0.31
PHACTR1-210ENST00000489548 RIMBP3BA6NNM3 1639 aa16.99■□□□□ 0.31
PHACTR1-210ENST00000489548 RIMBP3Q9UFD9 1639 aa16.99■□□□□ 0.31
PHACTR1-210ENST00000489548 IFT140Q96RY7 1462 aa16.99■□□□□ 0.31
PHACTR1-210ENST00000489548 CCDC88BA6NC98 1476 aa16.95■□□□□ 0.3
PHACTR1-210ENST00000489548 PRDM2Q13029 1718 aa16.93■□□□□ 0.3
PHACTR1-210ENST00000489548 ARHGEF11O15085 1522 aa16.92■□□□□ 0.3
PHACTR1-210ENST00000489548 TOPBP1Q92547 1522 aa16.92■□□□□ 0.3
PHACTR1-210ENST00000489548 CYB5RLQ6IPT4 315 aa16.89■□□□□ 0.29
PHACTR1-210ENST00000489548 ABCC8Q09428 1581 aa16.87■□□□□ 0.29
PHACTR1-210ENST00000489548 EIF4G3O43432 1585 aaKnown RBP16.83■□□□□ 0.28
PHACTR1-210ENST00000489548 AQRO60306 1485 aaKnown RBP eCLIP16.83■□□□□ 0.28
PHACTR1-210ENST00000489548 DNMBPQ6XZF7 1577 aa16.81■□□□□ 0.28
PHACTR1-210ENST00000489548 FBLN2P98095 1184 aa16.79■□□□□ 0.28
PHACTR1-210ENST00000489548 TRHP20396 242 aaPredicted RBP16.77■□□□□ 0.28
PHACTR1-210ENST00000489548 TARBP1Q13395 1621 aaKnown RBP16.77■□□□□ 0.27
PHACTR1-210ENST00000489548 CHD1O14646 1710 aa16.75■□□□□ 0.27
PHACTR1-210ENST00000489548 ARAP1Q96P48 1450 aa16.74■□□□□ 0.27
PHACTR1-210ENST00000489548 POLA1P09884 1462 aaPredicted RBP16.73■□□□□ 0.27
PHACTR1-210ENST00000489548 RAD54L2Q9Y4B4 1467 aa16.69■□□□□ 0.26
PHACTR1-210ENST00000489548 TDRD9Q8NDG6 1382 aaKnown RBP16.69■□□□□ 0.26
PHACTR1-210ENST00000489548 SOGA1O94964 1423 aa16.69■□□□□ 0.26
PHACTR1-210ENST00000489548 CHMP7Q8WUX9 453 aaPredicted RBP16.63■□□□□ 0.25
PHACTR1-210ENST00000489548 SNAPC4Q5SXM2 1469 aa16.61■□□□□ 0.25
PHACTR1-210ENST00000489548 FGD5Q6ZNL6 1462 aa16.59■□□□□ 0.25
PHACTR1-210ENST00000489548 CLASP1Q7Z460 1538 aa16.58■□□□□ 0.24
PHACTR1-210ENST00000489548 MAGI1Q96QZ7 1491 aaPredicted RBP16.56■□□□□ 0.24
PHACTR1-210ENST00000489548 WDR97A6NE52 1622 aa16.56■□□□□ 0.24
PHACTR1-210ENST00000489548 GRIN2BQ13224 1484 aa16.54■□□□□ 0.24
PHACTR1-210ENST00000489548 SYNJ1O43426 1573 aa16.54■□□□□ 0.24
PHACTR1-210ENST00000489548 CUX1P39880 1505 aa16.53■□□□□ 0.24
PHACTR1-210ENST00000489548 SYNJ2O15056 1496 aa16.51■□□□□ 0.23
PHACTR1-210ENST00000489548 AEBP2Q6ZN18 517 aaPredicted RBP16.47■□□□□ 0.23
PHACTR1-210ENST00000489548 GAPVD1Q14C86 1478 aa16.45■□□□□ 0.22
PHACTR1-210ENST00000489548 PBRM1Q86U86 1689 aa16.39■□□□□ 0.21
PHACTR1-210ENST00000489548 ABCA10Q8WWZ4 1543 aa16.39■□□□□ 0.21
PHACTR1-210ENST00000489548 ABCA5Q8WWZ7 1642 aa16.35■□□□□ 0.21
PHACTR1-210ENST00000489548 GRIN2AQ12879 1464 aa16.32■□□□□ 0.2
PHACTR1-210ENST00000489548 ERCC6L2Q5T890 1561 aa16.32■□□□□ 0.2
PHACTR1-210ENST00000489548 WRNQ14191 1432 aaPredicted RBP eCLIP16.29■□□□□ 0.2
PHACTR1-210ENST00000489548 NUP160Q12769 1436 aa16.28■□□□□ 0.2
PHACTR1-210ENST00000489548 CEP170Q5SW79 1584 aa16.26■□□□□ 0.19
PHACTR1-210ENST00000489548 SUPT5HO00267 1087 aaKnown RBP16.24■□□□□ 0.19
PHACTR1-210ENST00000489548 FHAD1B1AJZ9 1412 aa16.24■□□□□ 0.19
PHACTR1-210ENST00000489548 ADAMTS12P58397 1594 aa16.24■□□□□ 0.19
PHACTR1-210ENST00000489548 SHROOM2Q13796 1616 aa16.21■□□□□ 0.19
PHACTR1-210ENST00000489548 JPH4Q96JJ6 628 aa16.18■□□□□ 0.18
PHACTR1-210ENST00000489548 TOP2BQ02880 1626 aa16.18■□□□□ 0.18
PHACTR1-210ENST00000489548 PRG4Q92954 1404 aaPredicted RBP16.17■□□□□ 0.18
PHACTR1-210ENST00000489548 BIVM-ERCC5R4GMW8 1640 aa16.16■□□□□ 0.18
PHACTR1-210ENST00000489548 ERICH3Q5RHP9 1530 aa16.16■□□□□ 0.18
PHACTR1-210ENST00000489548 KIF13AQ9H1H9 1805 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms