RNA–Protein interactions for RNA: ENST00000489541.1

C1S-214, Transcript of complement C1s, humanhuman

TSL 3

Gene C1S, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1S-214ENST00000489541 NISCHQ9Y2I1 1504 aa41.94■■■■■ 4.3
C1S-214ENST00000489541 ABCC9O60706 1549 aa37.74■■■■□ 3.63
C1S-214ENST00000489541 CCDC180Q9P1Z9 1646 aa37.61■■■■□ 3.61
C1S-214ENST00000489541 RB1CC1Q8TDY2 1594 aa35.83■■■■□ 3.33
C1S-214ENST00000489541 NACADO15069 1562 aa35.58■■■■□ 3.29
C1S-214ENST00000489541 DNAJC5BQ9UF47 199 aa35.57■■■■□ 3.28
C1S-214ENST00000489541 DCAF8L2P0C7V8 631 aa35.35■■■■□ 3.25
C1S-214ENST00000489541 PABPN1Q86U42 306 aaKnown RBP eCLIP35.14■■■■□ 3.22
C1S-214ENST00000489541 UNC13AQ9UPW8 1703 aa35.12■■■■□ 3.21
C1S-214ENST00000489541 MYO15BQ96JP2 1530 aa35.08■■■■□ 3.21
C1S-214ENST00000489541 BICRAQ9NZM4 1560 aa34.9■■■■□ 3.18
C1S-214ENST00000489541 ZCCHC6Q5VYS8 1495 aaKnown RBP34.75■■■■□ 3.15
C1S-214ENST00000489541 DCAF1Q9Y4B6 1507 aa34.61■■■■□ 3.13
C1S-214ENST00000489541 SCRIBQ14160 1630 aa34.3■■■■□ 3.08
C1S-214ENST00000489541 SHROOM4Q9ULL8 1493 aa34.3■■■■□ 3.08
C1S-214ENST00000489541 CC2D2AQ9P2K1 1620 aa34.09■■■■□ 3.05
C1S-214ENST00000489541 EIF4G1Q04637 1599 aaKnown RBP33.99■■■■□ 3.03
C1S-214ENST00000489541 CECR2Q9BXF3 1484 aa33.99■■■■□ 3.03
C1S-214ENST00000489541 NCAPD3P42695 1498 aa32.88■■■□□ 2.85
C1S-214ENST00000489541 ATAD2BQ9ULI0 1458 aa32.79■■■□□ 2.84
C1S-214ENST00000489541 SMARCA4P51532 1647 aa32.72■■■□□ 2.83
C1S-214ENST00000489541 DNAJC5Q9H3Z4 198 aa32.63■■■□□ 2.81
C1S-214ENST00000489541 SMARCA2P51531 1590 aa32.62■■■□□ 2.81
C1S-214ENST00000489541 HMGXB3Q12766 1538 aa32.61■■■□□ 2.81
C1S-214ENST00000489541 BAZ1AQ9NRL2 1556 aaPredicted RBP32.51■■■□□ 2.79
C1S-214ENST00000489541 ERCC6Q03468 1493 aa32.51■■■□□ 2.79
C1S-214ENST00000489541 CUX2O14529 1486 aa32.5■■■□□ 2.79
C1S-214ENST00000489541 NESP48681 1621 aa32.44■■■□□ 2.78
C1S-214ENST00000489541 PEG3Q9GZU2 1588 aa32.41■■■□□ 2.78
C1S-214ENST00000489541 BAZ1BQ9UIG0 1483 aaKnown RBP32.41■■■□□ 2.78
C1S-214ENST00000489541 MROH2BQ7Z745 1585 aa32.34■■■□□ 2.77
C1S-214ENST00000489541 LAMC3Q9Y6N6 1575 aa32.11■■■□□ 2.73
C1S-214ENST00000489541 THOC2Q8NI27 1593 aaKnown RBP32.11■■■□□ 2.73
C1S-214ENST00000489541 KIF21AQ7Z4S6 1674 aa31.99■■■□□ 2.71
C1S-214ENST00000489541 WIZO95785 1651 aa31.94■■■□□ 2.7
C1S-214ENST00000489541 PDS5BQ9NTI5 1447 aa31.91■■■□□ 2.7
C1S-214ENST00000489541 CADPSQ9ULU8 1353 aa31.87■■■□□ 2.69
C1S-214ENST00000489541 MRC2Q9UBG0 1479 aa31.68■■■□□ 2.66
C1S-214ENST00000489541 RSF1Q96T23 1441 aaPredicted RBP31.64■■■□□ 2.66
C1S-214ENST00000489541 WDR62O43379 1518 aa31.63■■■□□ 2.65
C1S-214ENST00000489541 CEP164Q9UPV0 1460 aa31.52■■■□□ 2.64
C1S-214ENST00000489541 CFTRP13569 1480 aa31.51■■■□□ 2.63
C1S-214ENST00000489541 FANCD2Q9BXW9 1451 aa31.5■■■□□ 2.63
C1S-214ENST00000489541 TOP2AP11388 1531 aaKnown RBP31.49■■■□□ 2.63
C1S-214ENST00000489541 URB2Q14146 1524 aaKnown RBP31.29■■■□□ 2.6
C1S-214ENST00000489541 CCDC88BA6NC98 1476 aa31.17■■■□□ 2.58
C1S-214ENST00000489541 PRDM2Q13029 1718 aa31.15■■■□□ 2.58
C1S-214ENST00000489541 TRIM41Q8WV44 630 aa31.11■■■□□ 2.57
C1S-214ENST00000489541 OSCARQ8IYS5 282 aa31■■■□□ 2.55
C1S-214ENST00000489541 ZNF608Q9ULD9 1512 aaPredicted RBP30.93■■■□□ 2.54
C1S-214ENST00000489541 TOPBP1Q92547 1522 aa30.92■■■□□ 2.54
C1S-214ENST00000489541 IFT140Q96RY7 1462 aa30.9■■■□□ 2.54
C1S-214ENST00000489541 DNMBPQ6XZF7 1577 aa30.77■■■□□ 2.52
C1S-214ENST00000489541 ABCC8Q09428 1581 aa30.76■■■□□ 2.52
C1S-214ENST00000489541 EIF4G3O43432 1585 aaKnown RBP30.71■■■□□ 2.51
C1S-214ENST00000489541 TARBP1Q13395 1621 aaKnown RBP30.67■■■□□ 2.5
C1S-214ENST00000489541 RIMBP3CA6NJZ7 1639 aa30.66■■■□□ 2.5
C1S-214ENST00000489541 RIMBP3BA6NNM3 1639 aa30.66■■■□□ 2.5
C1S-214ENST00000489541 RIMBP3Q9UFD9 1639 aa30.66■■■□□ 2.5
C1S-214ENST00000489541 AQRO60306 1485 aaKnown RBP eCLIP30.63■■■□□ 2.49
C1S-214ENST00000489541 POLA1P09884 1462 aaPredicted RBP30.61■■■□□ 2.49
C1S-214ENST00000489541 ARHGEF11O15085 1522 aa30.55■■■□□ 2.48
C1S-214ENST00000489541 RAD54L2Q9Y4B4 1467 aa30.51■■■□□ 2.48
C1S-214ENST00000489541 CHD1O14646 1710 aa30.51■■■□□ 2.47
C1S-214ENST00000489541 SOGA1O94964 1423 aa30.43■■■□□ 2.46
C1S-214ENST00000489541 TDRD9Q8NDG6 1382 aaKnown RBP30.41■■■□□ 2.46
C1S-214ENST00000489541 FGD5Q6ZNL6 1462 aa30.39■■■□□ 2.46
C1S-214ENST00000489541 CUX1P39880 1505 aa30.38■■■□□ 2.45
C1S-214ENST00000489541 FBLN2P98095 1184 aa30.35■■■□□ 2.45
C1S-214ENST00000489541 CYB5RLQ6IPT4 315 aa30.31■■■□□ 2.44
C1S-214ENST00000489541 SNAPC4Q5SXM2 1469 aa30.28■■■□□ 2.44
C1S-214ENST00000489541 ARAP1Q96P48 1450 aa30.27■■■□□ 2.44
C1S-214ENST00000489541 WDR97A6NE52 1622 aa30.27■■■□□ 2.44
C1S-214ENST00000489541 CLASP1Q7Z460 1538 aa30.17■■■□□ 2.42
C1S-214ENST00000489541 GRIN2BQ13224 1484 aa30.17■■■□□ 2.42
C1S-214ENST00000489541 MAGI1Q96QZ7 1491 aaPredicted RBP30.17■■■□□ 2.42
C1S-214ENST00000489541 SUPT5HO00267 1087 aaKnown RBP30.12■■■□□ 2.41
C1S-214ENST00000489541 CHMP7Q8WUX9 453 aaPredicted RBP30.12■■■□□ 2.41
C1S-214ENST00000489541 SYNJ2O15056 1496 aa30.08■■■□□ 2.41
C1S-214ENST00000489541 SYNJ1O43426 1573 aa30.07■■■□□ 2.4
C1S-214ENST00000489541 GAPVD1Q14C86 1478 aa30.06■■■□□ 2.4
C1S-214ENST00000489541 PBRM1Q86U86 1689 aa30.05■■■□□ 2.4
C1S-214ENST00000489541 ABCA10Q8WWZ4 1543 aa30.04■■■□□ 2.4
C1S-214ENST00000489541 ABCA5Q8WWZ7 1642 aa30.02■■■□□ 2.4
C1S-214ENST00000489541 TRHP20396 242 aaPredicted RBP29.93■■■□□ 2.38
C1S-214ENST00000489541 WRNQ14191 1432 aaPredicted RBP eCLIP29.86■■■□□ 2.37
C1S-214ENST00000489541 BIVM-ERCC5R4GMW8 1640 aa29.85■■■□□ 2.37
C1S-214ENST00000489541 TOP2BQ02880 1626 aa29.84■■■□□ 2.37
C1S-214ENST00000489541 GRIN2AQ12879 1464 aa29.8■■■□□ 2.36
C1S-214ENST00000489541 ADAMTS12P58397 1594 aa29.78■■■□□ 2.36
C1S-214ENST00000489541 ERCC6L2Q5T890 1561 aa29.75■■■□□ 2.35
C1S-214ENST00000489541 CEP170Q5SW79 1584 aa29.73■■■□□ 2.35
C1S-214ENST00000489541 NUP160Q12769 1436 aa29.72■■■□□ 2.35
C1S-214ENST00000489541 FHAD1B1AJZ9 1412 aa29.67■■■□□ 2.34
C1S-214ENST00000489541 ERICH3Q5RHP9 1530 aa29.63■■■□□ 2.33
C1S-214ENST00000489541 SHROOM2Q13796 1616 aa29.6■■■□□ 2.33
C1S-214ENST00000489541 PRG4Q92954 1404 aaPredicted RBP29.41■■■□□ 2.3
C1S-214ENST00000489541 JPH4Q96JJ6 628 aa29.39■■■□□ 2.3
C1S-214ENST00000489541 RUSC2Q8N2Y8 1516 aa29.37■■■□□ 2.29
C1S-214ENST00000489541 IGF1RP08069 1367 aa29.28■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms