RNA–Protein interactions for RNA: ENST00000489531.1

NXF2B-201, Transcript of nuclear RNA export factor 2B, humanhuman

TSL 3

Gene NXF2B, Length 720 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF2B-201ENST00000489531 NISCHQ9Y2I1 1504 aa31.36■■■□□ 2.61
NXF2B-201ENST00000489531 CCDC180Q9P1Z9 1646 aa28■■■□□ 2.07
NXF2B-201ENST00000489531 ABCC9O60706 1549 aa27.42■■□□□ 1.98
NXF2B-201ENST00000489531 RB1CC1Q8TDY2 1594 aa26.38■■□□□ 1.81
NXF2B-201ENST00000489531 NACADO15069 1562 aa26.33■■□□□ 1.8
NXF2B-201ENST00000489531 DCAF8L2P0C7V8 631 aa26.21■■□□□ 1.79
NXF2B-201ENST00000489531 MYO15BQ96JP2 1530 aa26.14■■□□□ 1.77
NXF2B-201ENST00000489531 ZCCHC6Q5VYS8 1495 aaKnown RBP26.11■■□□□ 1.77
NXF2B-201ENST00000489531 DCAF1Q9Y4B6 1507 aa25.98■■□□□ 1.75
NXF2B-201ENST00000489531 UNC13AQ9UPW8 1703 aa25.81■■□□□ 1.72
NXF2B-201ENST00000489531 PABPN1Q86U42 306 aaKnown RBP eCLIP25.57■■□□□ 1.68
NXF2B-201ENST00000489531 BICRAQ9NZM4 1560 aa25.56■■□□□ 1.68
NXF2B-201ENST00000489531 SCRIBQ14160 1630 aa25.47■■□□□ 1.67
NXF2B-201ENST00000489531 SHROOM4Q9ULL8 1493 aa25.33■■□□□ 1.65
NXF2B-201ENST00000489531 DNAJC5BQ9UF47 199 aa25.23■■□□□ 1.63
NXF2B-201ENST00000489531 EIF4G1Q04637 1599 aaKnown RBP24.9■■□□□ 1.58
NXF2B-201ENST00000489531 CC2D2AQ9P2K1 1620 aa24.83■■□□□ 1.57
NXF2B-201ENST00000489531 CECR2Q9BXF3 1484 aa24.66■■□□□ 1.54
NXF2B-201ENST00000489531 SMARCA4P51532 1647 aa24.38■■□□□ 1.49
NXF2B-201ENST00000489531 BAZ1AQ9NRL2 1556 aaPredicted RBP24.34■■□□□ 1.49
NXF2B-201ENST00000489531 NCAPD3P42695 1498 aa24.26■■□□□ 1.47
NXF2B-201ENST00000489531 ATAD2BQ9ULI0 1458 aa24.26■■□□□ 1.47
NXF2B-201ENST00000489531 SMARCA2P51531 1590 aa24.25■■□□□ 1.47
NXF2B-201ENST00000489531 HMGXB3Q12766 1538 aa24.15■■□□□ 1.46
NXF2B-201ENST00000489531 MROH2BQ7Z745 1585 aa24.15■■□□□ 1.46
NXF2B-201ENST00000489531 PEG3Q9GZU2 1588 aa24.15■■□□□ 1.46
NXF2B-201ENST00000489531 BAZ1BQ9UIG0 1483 aaKnown RBP24.06■■□□□ 1.44
NXF2B-201ENST00000489531 WIZO95785 1651 aa23.91■■□□□ 1.42
NXF2B-201ENST00000489531 RSF1Q96T23 1441 aaPredicted RBP23.83■■□□□ 1.4
NXF2B-201ENST00000489531 NESP48681 1621 aa23.69■■□□□ 1.38
NXF2B-201ENST00000489531 LAMC3Q9Y6N6 1575 aa23.67■■□□□ 1.38
NXF2B-201ENST00000489531 ERCC6Q03468 1493 aa23.67■■□□□ 1.38
NXF2B-201ENST00000489531 TOP2AP11388 1531 aaKnown RBP23.65■■□□□ 1.38
NXF2B-201ENST00000489531 CADPSQ9ULU8 1353 aa23.54■■□□□ 1.36
NXF2B-201ENST00000489531 PDS5BQ9NTI5 1447 aa23.5■■□□□ 1.35
NXF2B-201ENST00000489531 CUX2O14529 1486 aa23.48■■□□□ 1.35
NXF2B-201ENST00000489531 KIF21AQ7Z4S6 1674 aa23.46■■□□□ 1.35
NXF2B-201ENST00000489531 THOC2Q8NI27 1593 aaKnown RBP23.4■■□□□ 1.34
NXF2B-201ENST00000489531 CFTRP13569 1480 aa23.38■■□□□ 1.33
NXF2B-201ENST00000489531 CCDC88BA6NC98 1476 aa23.35■■□□□ 1.33
NXF2B-201ENST00000489531 PRDM2Q13029 1718 aa23.29■■□□□ 1.32
NXF2B-201ENST00000489531 FANCD2Q9BXW9 1451 aa23.27■■□□□ 1.32
NXF2B-201ENST00000489531 MRC2Q9UBG0 1479 aa23.26■■□□□ 1.31
NXF2B-201ENST00000489531 CEP164Q9UPV0 1460 aa23.26■■□□□ 1.31
NXF2B-201ENST00000489531 WDR62O43379 1518 aa23.2■■□□□ 1.3
NXF2B-201ENST00000489531 SUPT5HO00267 1087 aaKnown RBP23.11■■□□□ 1.29
NXF2B-201ENST00000489531 URB2Q14146 1524 aaKnown RBP23.03■■□□□ 1.28
NXF2B-201ENST00000489531 ABCC8Q09428 1581 aa22.93■■□□□ 1.26
NXF2B-201ENST00000489531 TOPBP1Q92547 1522 aa22.9■■□□□ 1.26
NXF2B-201ENST00000489531 DNMBPQ6XZF7 1577 aa22.88■■□□□ 1.25
NXF2B-201ENST00000489531 DNAJC5Q9H3Z4 198 aa22.86■■□□□ 1.25
NXF2B-201ENST00000489531 IFT140Q96RY7 1462 aa22.79■■□□□ 1.24
NXF2B-201ENST00000489531 POLA1P09884 1462 aaPredicted RBP22.68■■□□□ 1.22
NXF2B-201ENST00000489531 CUX1P39880 1505 aa22.67■■□□□ 1.22
NXF2B-201ENST00000489531 TARBP1Q13395 1621 aaKnown RBP22.66■■□□□ 1.22
NXF2B-201ENST00000489531 ZNF608Q9ULD9 1512 aaPredicted RBP22.66■■□□□ 1.22
NXF2B-201ENST00000489531 FGD5Q6ZNL6 1462 aa22.61■■□□□ 1.21
NXF2B-201ENST00000489531 EIF4G3O43432 1585 aaKnown RBP22.6■■□□□ 1.21
NXF2B-201ENST00000489531 SOGA1O94964 1423 aa22.58■■□□□ 1.21
NXF2B-201ENST00000489531 RAD54L2Q9Y4B4 1467 aa22.57■■□□□ 1.2
NXF2B-201ENST00000489531 WDR97A6NE52 1622 aa22.53■■□□□ 1.2
NXF2B-201ENST00000489531 AQRO60306 1485 aaKnown RBP eCLIP22.52■■□□□ 1.2
NXF2B-201ENST00000489531 BIVM-ERCC5R4GMW8 1640 aa22.49■■□□□ 1.19
NXF2B-201ENST00000489531 WRNQ14191 1432 aaPredicted RBP eCLIP22.48■■□□□ 1.19
NXF2B-201ENST00000489531 TOP2BQ02880 1626 aa22.47■■□□□ 1.19
NXF2B-201ENST00000489531 OSCARQ8IYS5 282 aa22.46■■□□□ 1.19
NXF2B-201ENST00000489531 TDRD9Q8NDG6 1382 aaKnown RBP22.46■■□□□ 1.19
NXF2B-201ENST00000489531 SYNJ1O43426 1573 aa22.43■■□□□ 1.18
NXF2B-201ENST00000489531 ABCA10Q8WWZ4 1543 aa22.41■■□□□ 1.18
NXF2B-201ENST00000489531 CHD1O14646 1710 aa22.37■■□□□ 1.17
NXF2B-201ENST00000489531 GRIN2BQ13224 1484 aa22.35■■□□□ 1.17
NXF2B-201ENST00000489531 PBRM1Q86U86 1689 aa22.34■■□□□ 1.17
NXF2B-201ENST00000489531 ABCA5Q8WWZ7 1642 aa22.34■■□□□ 1.17
NXF2B-201ENST00000489531 GAPVD1Q14C86 1478 aa22.34■■□□□ 1.17
NXF2B-201ENST00000489531 SNAPC4Q5SXM2 1469 aa22.32■■□□□ 1.16
NXF2B-201ENST00000489531 MAGI1Q96QZ7 1491 aaPredicted RBP22.32■■□□□ 1.16
NXF2B-201ENST00000489531 FBLN2P98095 1184 aa22.27■■□□□ 1.16
NXF2B-201ENST00000489531 SYNJ2O15056 1496 aa22.22■■□□□ 1.15
NXF2B-201ENST00000489531 CHMP7Q8WUX9 453 aaPredicted RBP22.2■■□□□ 1.14
NXF2B-201ENST00000489531 ERICH3Q5RHP9 1530 aa22.15■■□□□ 1.14
NXF2B-201ENST00000489531 RIMBP3CA6NJZ7 1639 aa22.13■■□□□ 1.13
NXF2B-201ENST00000489531 RIMBP3BA6NNM3 1639 aa22.13■■□□□ 1.13
NXF2B-201ENST00000489531 RIMBP3Q9UFD9 1639 aa22.13■■□□□ 1.13
NXF2B-201ENST00000489531 ADAMTS12P58397 1594 aa22.12■■□□□ 1.13
NXF2B-201ENST00000489531 ARHGEF11O15085 1522 aa22.11■■□□□ 1.13
NXF2B-201ENST00000489531 CLASP1Q7Z460 1538 aa22.09■■□□□ 1.13
NXF2B-201ENST00000489531 FHAD1B1AJZ9 1412 aa22.07■■□□□ 1.12
NXF2B-201ENST00000489531 GRIN2AQ12879 1464 aa22.06■■□□□ 1.12
NXF2B-201ENST00000489531 KIF27Q86VH2 1401 aa22.04■■□□□ 1.12
NXF2B-201ENST00000489531 TRIM41Q8WV44 630 aa22.03■■□□□ 1.12
NXF2B-201ENST00000489531 NUP160Q12769 1436 aa21.97■■□□□ 1.11
NXF2B-201ENST00000489531 CEP170Q5SW79 1584 aa21.95■■□□□ 1.11
NXF2B-201ENST00000489531 CUL7Q14999 1698 aa21.95■■□□□ 1.1
NXF2B-201ENST00000489531 IGF1RP08069 1367 aa21.93■■□□□ 1.1
NXF2B-201ENST00000489531 ARAP1Q96P48 1450 aa21.9■■□□□ 1.1
NXF2B-201ENST00000489531 CYB5RLQ6IPT4 315 aa21.88■■□□□ 1.09
NXF2B-201ENST00000489531 SHROOM2Q13796 1616 aa21.84■■□□□ 1.09
NXF2B-201ENST00000489531 CARMIL1Q5VZK9 1371 aa21.81■■□□□ 1.08
NXF2B-201ENST00000489531 RUSC2Q8N2Y8 1516 aa21.8■■□□□ 1.08
NXF2B-201ENST00000489531 ERCC6L2Q5T890 1561 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms